Clone Sequence Records
BO15069.3prime Sequence
578 bp (578 high quality bases) assembled on 2006-06-16
> BO15069.3prime
ATGGTCTAGAAAGCTTGCGTCCTTGATGATGATGGGCCTGGTGCGGCAGC
GTCGGATGCCACCGCCCACAACATTGCCCTGGCAGCTCCACTGGCTGGCC
CTCACCCACTGGTTAAGCGGATTCCGGACGCAGTTCCTCCTCTGGGCCTC
GCAGCGGGTCTGCAGGATGCAAGCGCCCTGCTGGTCCCTCCAGCAGCTGG
CCAGCTTGTCGTCAAGGCAGATCCTCCTCTGGCACTCCTTGATGCGCTTG
CCATCGGACTGGGGACGAGGACGCAGCCTGATGGCGCACTGGCCCACGCC
GCTGGTGCCGGGAATGTTGCGACAGCGGGTGATGCATGTCTCCCGAATGG
GTTCGAGTCCATTGTCCCGACGGCGGCAATTCTTCTCCCGCAGACGACAG
GCCGGCAGGCGGGTGCACACATTGGTCACCTTGTTGCGGATGCACACACT
CTGGCCGCTGGACAGACCGGTGCAGCGACCCACACACGGACGCCGATCGC
CATCAGCCTGGATGGCCACGATGGCCAGGACGACGAGGAGAAGGCAAATG
GTGAACTTGCTCATGTCGACTGATAACT
BO15069.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PA | 549 | CG4151-RA | 1..546 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:50:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..944 | 565..19 | 2735 | 100 | Minus |
| CG4151-RA | 758 | CG4151-RA | 61..607 | 565..19 | 2735 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502419 | 565..19 | 2735 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:50:22 has no hits.
BO15069.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:25 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 15..564 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:28 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 15..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:53:31 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 8..565 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:12:03 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 61..617 | 8..565 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:12:03 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501873..5502429 | 8..565 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:53:31 Download gff for
BO15069.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395906..5396462 | 8..565 | 99 | | Minus |
BO15069.5prime Sequence
578 bp (578 high quality bases) assembled on 2006-06-16
> BO15069.5prime
GAAGTTATCAGTCGACATGAGCAAGTTCACCATTTGCCTTCTCCTCGTCG
TCCTGGCCATCGTGGCCATCCAGGCTGATGGCGATCGGCGTCCGTGTGTG
GGTCGCTGCACCGGTCTGTCCAGCGGCCAGAGTGTGTGCATCCGCAACAA
GGTGACCAATGTGTGCACCCGCCTGCCGGCCTGTCGTCTGCGGGAGAAGA
ATTGCCGCCGTCGGGACAATGGACTCGAACCCATTCGGGAGACATGCATC
ACCCGCTGTCGCAACATTCCCGGCACCAGCGGCGTGGGCCAGTGCGCCAT
CAGGCTGCGTCCTCGTCCCCAGTCCGATGGCAAGCGCATCAAGGAGTGCC
AGAGGAGGATCTGCCTTGACGACAAGCTGGCCAGCTGCTGGAGGGACCAG
CAGGGCGCTTGCATCCTGCAGACCCGCTGCGAGGCCCAGAGGAGGAACTG
CGTCCGGAATCCGCTTAACCAGTGGGTGAGGGCCAGCCAGTGGAGCTGCC
AGGGCAATGTTGTGGGCGGTGGCATCCGACGCTGCCGCACCAGGCCCATC
ATCATCAAGGACGCAAGCTTTCTAGACC
BO15069.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PA | 549 | CG4151-RA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:19:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..944 | 16..562 | 2735 | 100 | Plus |
| CG4151-RA | 758 | CG4151-RA | 61..607 | 16..562 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502419 | 16..562 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:19:55 has no hits.
BO15069.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:26 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..566 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:29 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-PA | 1..549 | 17..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:29:34 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:48:28 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 61..617 | 16..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 13:48:28 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501873..5502429 | 16..573 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:29:34 Download gff for
BO15069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395906..5396462 | 16..573 | 99 | | Plus |
BO15069.complete Sequence
580 bp (580 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633336
> BO15069.complete
GAAGTTATCAGTCGACATGAGCAAGTTCACCATTTGCCTTCTCCTCGTCG
TCCTGGCCATCGTGGCCATCCAGGCTGATGGCGATCGGCGTCCGTGTGTG
GGTCGCTGCACCGGTCTGTCCAGCGGCCAGAGTGTGTGCATCCGCAACAA
GGTGACCAATGTGTGCACCCGCCTGCCGGCCTGTCGTCTGCGGGAGAAGA
ATTGCCGCCGTCGGGACAATGGACTCGAACCCATTCGGGAGACATGCATC
ACCCGCTGTCGCAACATTCCCGGCACCAGCGGCGTGGGCCAGTGCGCCAT
CAGGCTGCGTCCTCGTCCCCAGTCCGATGGCAAGCGCATCAAGGAGTGCC
AGAGGAGGATCTGCCTTGACGACAAGCTGGCCAGCTGCTGGAGGGACCAG
CAGGGCGCTTGCATCCTGCAGACCCGCTGCGAGGCCCAGAGGAGGAACTG
CGTCCGGAATCCGCTTAACCAGTGGGTGAGGGCCAGCCAGTGGAGCTGCC
AGGGCAATGTTGTGGGCGGTGGCATCCGACGCTGCCGCACCAGGCCCATC
ATCATCAAGGACGCAAGCTTTCTAGACCAT
BO15069.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 549 | CG4151-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG4151-RA | 549 | CG4151-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..944 | 16..562 | 2735 | 100 | Plus |
| CG4151-RA | 758 | CG4151-RA | 61..607 | 16..562 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502419 | 16..562 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:49:27 has no hits.
BO15069.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:37 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 1..549 | 17..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:05 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:59 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 43..588 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:37 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 16..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:49 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 62..607 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:49 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501874..5502419 | 17..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:59 Download gff for
BO15069.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395907..5396452 | 17..564 | 99 | | Plus |
BO15069.pep Sequence
Translation from 16 to 580
> BO15069.pep
MSKFTICLLLVVLAIVAIQADGDRRPCVGRCTGLSSGQSVCIRNKVTNVC
TRLPACRLREKNCRRRDNGLEPIRETCITRCRNIPGTSGVGQCAIRLRPR
PQSDGKRIKECQRRICLDDKLASCWRDQQGACILQTRCEAQRRNCVRNPL
NQWVRASQWSCQGNVVGGGIRRCRTRPIIIKDASFLDH
BO15069.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-PB | 182 | CG4151-PB | 1..182 | 1..182 | 990 | 100 | Plus |
| CG4151-PA | 182 | CG4151-PA | 1..182 | 1..182 | 990 | 100 | Plus |
