Clone BO15070 Report

Search the DGRC for BO15070

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG14717-RA
Protein status:BO15070.pep: validated full length
Sequenced Size:952

Clone Sequence Records

BO15070.3prime Sequence

905 bp (732 high quality bases) assembled on 2006-06-16

> BO15070.3prime
ATGGTCTAGAAAGCTTGCACATACTAAGCATGTTTGAGTAAACTCCACGA
CTAGTTCAACAAATTGTTCCGGCTGATCCTCATACACACAGTGTCCAGCA
TCCAGAATCTGTACCACTGTATTTGGAAAGTATCTCTGCATCACGGCAAT
ACTGGTCGTGGTCACGAATTCCGACTGGGAACCGGCTATGAGCAAGACTT
CGCCCATGTAGGGACGCAGTCCGCCCAAAGTGGCCTCGTAATTGATCATC
ATCTCCCCCCAGGAGCTTAGGACCGCCTGGGGATTAACTGCCCAGCCAAA
GGTGTTGTCCTGCATCTTGCGCAGATTGTAAATAATGCGACGCAGCTCGG
AGGCGTCGTGGACCACATCCTGGAACAGTGGCAGGATGAACGTACGCCCC
TCGGAAAGTGATAGATTTGAGGGAATACTGGGCGCCACCTGGAGCATCAT
CTCGAACACCTGCCGAGTGAGATAGAAGTTACTGGGCACCGGTGCTGGTG
TGATGTCCACCAGTATGACCCGCTCGACGAGTTGCGGCTGAGTGAGTGCC
AGTGTCATCATTGCCCGACCGCCCATTCCATGTCCAAGTGCAACGATCTT
GTTCAGTCTCTGGTGGCTCATCAGGGCCTCCACGTCGGCGGCCAGGTGCA
TTGGCGAATGCCCGGTTATGTAAGGACTAAGGCCATGATTCCGAGCATCC
ACGGTGATCACCTGGCGCAATCCAACCTGACTGAGGTTAACAGCTACCTG
GCGCCAGGATTCCAGTGACAGATTGAGGTCGTGCATCACCACAATTGGTG
GCGCCTGCATCTGATTGCGCGGCGAGGTGTAGGAGACATACTCCAAACGA
GTGCCCTGGACAAATGACTGGAAGTTTCGCAGCACTTGGGCTCCGCCTTT
GGAAA

BO15070.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PA 921 CG14717-RA 79..918 858..19 4175 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:05:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 169..1055 905..19 4435 100 Minus
CG14717-RA 1154 CG14717-RA 169..1055 905..19 4435 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696677..11697563 905..19 4435 100 Minus
Blast to na_te.dros performed on 2015-02-03 06:05:27 has no hits.

BO15070.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:27 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 72..921 16..864 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:30 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 72..921 16..864 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:20:29 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 172..1060 14..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:35:59 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 172..1060 14..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:35:59 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11696680..11697568 14..902 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:20:29 Download gff for BO15070.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522402..7523290 14..902 99   Minus

BO15070.5prime Sequence

698 bp (678 high quality bases) assembled on 2006-06-16

> BO15070.5prime
GAAGTTATCAGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGG

BO15070.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PA 921 CG14717-RA 1..682 17..698 3410 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 137..819 16..698 3415 100 Plus
CG14717-RA 1154 CG14717-RA 137..819 16..698 3415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696645..11697327 16..698 3415 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:30:36 has no hits.

BO15070.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:28 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 1..682 17..698 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:32 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-PA 1..682 17..698 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:08 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..819 16..698 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:43:07 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..819 16..698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:43:07 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11696645..11697327 16..698 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:08 Download gff for BO15070.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522367..7523049 16..698 100   Plus

BO15070.complete Sequence

952 bp (952 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633337

> BO15070.complete
GAAGTTATCAGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTT
CCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGC
ACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGC
GCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGC
GCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACC
GTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCC
AATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGA
ACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACA
CTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACAT
CACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCG
AGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCC
GAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGC
CTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACA
CCTTTGGCTGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAG
ATGATGATCAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGG
CGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCA
GTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTG
GATGCTGGACACTGTGTGTATGAGGATCAGCCGGAACAATTTGTTGAACT
AGTCGTGGAGTTTACTCAAACATGCTTAGTATGTGCAAGCTTTCTAGACC
AT

BO15070.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 921 CG14717-PB 1..918 17..934 4590 100 Plus
CG14717-RA 921 CG14717-PA 1..918 17..934 4590 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-RB 1819 CG14717-RB 137..1055 16..934 4595 100 Plus
CG14717-RA 1154 CG14717-RA 137..1055 16..934 4595 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11696645..11697563 16..934 4595 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:50:17 has no hits.

BO15070.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:38 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 1..921 17..937 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:07 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..1060 16..939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:22 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1055 17..936 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:38 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 137..1060 16..939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:13 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
CG14717-RA 138..1055 17..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:28:13 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11696646..11697563 17..936 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:22 Download gff for BO15070.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7522368..7523285 17..936 99   Plus

BO15070.pep Sequence

Translation from 16 to 952

> BO15070.pep
MARQRLLGSILSKGGAQVLRNFQSFVQGTRLEYVSYTSPRNQMQAPPIVV
MHDLNLSLESWRQVAVNLSQVGLRQVITVDARNHGLSPYITGHSPMHLAA
DVEALMSHQRLNKIVALGHGMGGRAMMTLALTQPQLVERVILVDITPAPV
PSNFYLTRQVFEMMLQVAPSIPSNLSLSEGRTFILPLFQDVVHDASELRR
IIYNLRKMQDNTFGWAVNPQAVLSSWGEMMINYEATLGGLRPYMGEVLLI
AGSQSEFVTTTSIAVMQRYFPNTVVQILDAGHCVYEDQPEQFVELVVEFT
QTCLVCASFLDH

BO15070.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14717-PB 306 CG14717-PB 1..306 1..306 1562 100 Plus
CG14717-PA 306 CG14717-PA 1..306 1..306 1562 100 Plus
CG2059-PB 308 CG2059-PB 39..303 31..299 379 33.7 Plus
CG2059-PA 308 CG2059-PA 39..303 31..299 379 33.7 Plus