Clone BO15079 Report

Search the DGRC for BO15079

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptObp99b-RA
Protein status:BO15079.pep: validated full length
Sequenced Size:481

Clone Sequence Records

BO15079.5prime Sequence

479 bp (479 high quality bases) assembled on 2006-06-16

> BO15079.5prime
GAAGTTATCAGTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCGCAAGCTTTCTAGACC

BO15079.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7592-PA 450 Obp99b-RA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..499 16..463 2240 100 Plus
Obp99b-RA 574 CG7592-RA 40..487 16..463 2240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716341..29716788 463..16 2240 100 Minus
Blast to na_te.dros performed 2015-02-04 02:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 360..322 105 74.4 Minus

BO15079.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:35 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..467 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:41 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 17..467 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:41:58 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..492 6..468 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:15 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..492 6..468 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:15 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29716336..29716796 6..468 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:41:58 Download gff for BO15079.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542058..25542518 6..468 98   Minus

BO15079.3prime Sequence

479 bp (478 high quality bases) assembled on 2006-05-29

> BO15079.3prime
ATGGTCTAGAAAGCTTGCGACCTTGACGCTGTGCTGCACCAGCTGCAGGT
TGGAGTTCATGAAGCACATGCCGGCGTGGTAGGCCTTCGAGCAGGAGTCG
CCCTCCTTGGAGTGGGTCTCGGCGCAGTGGGCGATCTTCTGGTGCACCTC
GTCCGATTCGTGCACCTCAACTCCAGGGCCGGCCAGCTGGATGTGGATCT
TGTGGACATCGAATCCGTGCTCGGTGTCGTAGAAGCCGAACTTCTGGAAG
ATGCACTCCAGGTAGCAGTGGGTCACCGCGTCATCGGGGTACTGCCACTT
CTTGTACTTCTCCACGAGCTCCTCGCTGGCGTGAACCTTCTCCACGCACT
GCGTGCGATAGTTGGTCAGATCCTCGTGCGTCTTCACCACATAGTCGTGG
TGATGGTGATGGTGATCGGCCAGGACAAAGGCCAGACCCAATAGGAGAAC
GATGAGAACCTTCATGTCGACTGATAACT

BO15079.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7592-PA 450 Obp99b-RA 1..447 465..19 2235 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..499 466..19 2240 100 Minus
Obp99b-RA 574 CG7592-RA 40..487 466..19 2240 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716341..29716788 19..466 2240 100 Plus
Blast to na_te.dros performed 2015-02-10 22:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 122..160 105 74.4 Plus

BO15079.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:34 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 15..465 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:40 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7592-PA 1..450 15..465 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:50:15 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..492 14..476 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:13:23 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 32..492 14..476 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:13:23 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29716336..29716796 14..476 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:50:15 Download gff for BO15079.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542058..25542518 14..476 98   Plus

BO15079.complete Sequence

481 bp (481 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633338

> BO15079.complete
GAAGTTATCAGTCGACATGAAGGTTCTCATCGTTCTCCTATTGGGTCTGG
CCTTTGTCCTGGCCGATCACCATCACCATCACCACGACTATGTGGTGAAG
ACGCACGAGGATCTGACCAACTATCGCACGCAGTGCGTGGAGAAGGTTCA
CGCCAGCGAGGAGCTCGTGGAGAAGTACAAGAAGTGGCAGTACCCCGATG
ACGCGGTGACCCACTGCTACCTGGAGTGCATCTTCCAGAAGTTCGGCTTC
TACGACACCGAGCACGGATTCGATGTCCACAAGATCCACATCCAGCTGGC
CGGCCCTGGAGTTGAGGTGCACGAATCGGACGAGGTGCACCAGAAGATCG
CCCACTGCGCCGAGACCCACTCCAAGGAGGGCGACTCCTGCTCGAAGGCC
TACCACGCCGGCATGTGCTTCATGAACTCCAACCTGCAGCTGGTGCAGCA
CAGCGTCAAGGTCGCAAGCTTTCTAGACCAT

BO15079.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 450 CG7592-PB 1..447 17..463 2235 100 Plus
Obp99b-RA 450 CG7592-PA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-RB 586 CG7592-RB 52..499 16..463 2240 100 Plus
Obp99b-RA 574 CG7592-RA 40..487 16..463 2240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29716341..29716788 463..16 2240 100 Minus
Blast to na_te.dros performed 2014-11-28 00:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 7609..7647 360..322 105 74.4 Minus

BO15079.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:39 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 1..450 17..467 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:08 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 15..475 6..468 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:48:47 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 41..487 17..465 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:39 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 15..475 6..468 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:24 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
Obp99b-RA 41..487 17..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:24 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29716339..29716787 17..465 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:48:47 Download gff for BO15079.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25542061..25542509 17..465 99   Minus

BO15079.pep Sequence

Translation from 16 to 481

> BO15079.pep
MKVLIVLLLGLAFVLADHHHHHHDYVVKTHEDLTNYRTQCVEKVHASEEL
VEKYKKWQYPDDAVTHCYLECIFQKFGFYDTEHGFDVHKIHIQLAGPGVE
VHESDEVHQKIAHCAETHSKEGDSCSKAYHAGMCFMNSNLQLVQHSVKVA
SFLDH

BO15079.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
Obp99b-PB 149 CG7592-PB 1..149 1..149 823 100 Plus
Obp99b-PA 149 CG7592-PA 1..149 1..149 823 100 Plus
Obp99a-PB 142 CG18111-PB 5..138 3..147 290 37.9 Plus
Obp99a-PA 142 CG18111-PA 5..138 3..147 290 37.9 Plus
Obp44a-PB 143 CG2297-PB 7..141 3..148 216 34.9 Plus