Clone BO15093 Report

Search the DGRC for BO15093

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG13365-RA
Protein status:BO15093.pep:
Sequenced Size:376

Clone Sequence Records

BO15093.5prime Sequence

374 bp (374 high quality bases) assembled on 2006-06-16

> BO15093.5prime
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGGCAAGCTTTCTAGACC

BO15093.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-PA 345 CG13365-RA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-RA 499 CG13365-RA 71..412 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 620804..621145 358..17 1710 100 Minus
X 23542271 X 620421..620598 358..181 680 92.1 Minus
Blast to na_te.dros performed on 2015-02-11 10:51:07 has no hits.

BO15093.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:46 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-PA 1..345 17..362 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:00 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-PA 1..345 17..362 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:39 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 65..417 9..365 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:40:11 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 65..417 9..365 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:40:11 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
X 620799..621149 9..365 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:39 Download gff for BO15093.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 514832..515182 9..365 98   Minus

BO15093.3prime Sequence

374 bp (374 high quality bases) assembled on 2006-06-16

> BO15093.3prime
ATGGTCTAGAAAGCTTGCCTCCTTGACCCGCTCCACCTCGCTGGCGTCGA
AGGGCACCTCCTCCACCTTGTGGAATCCAGAGAACCTGATGATCTTGCCG
GTCCCCTCGACCTTCAGGTGCTTGGCGAACTGTTGGGCCGGCGAAAGGGC
CATCTCCTCCTCCGTCTTGTAGCCGTAGTACTTGGCCCAGTCGTTGCGTC
CGGTGTAGACCATATAGCAAACGAGGCCGAATGCCTGCCAGGCCAGAACG
GCGTACCCGATGCTCAGGCGCCGCTTCCACAGCTCCGCCCGGTGCTCCGG
TATGGGATTCGTGTTGCGCCGCACCCAGCGGCGCAGCCACTTCATCTCGA
ACAGTGCCATGTCGACTGATAACT

BO15093.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-PA 345 CG13365-RA 1..342 360..19 1710 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-RA 499 CG13365-RA 71..412 360..19 1710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 620804..621145 19..360 1710 100 Plus
X 23542271 X 620421..620598 19..196 680 92.1 Plus
Blast to na_te.dros performed on 2015-01-30 19:01:08 has no hits.

BO15093.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:45 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-PA 1..345 15..360 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:58 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-PA 1..345 15..360 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:04:38 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 65..417 12..368 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:17:03 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 65..417 12..368 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:17:03 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
X 620799..621149 12..368 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:04:38 Download gff for BO15093.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 514832..515182 12..368 98   Plus

BO15093.complete Sequence

376 bp assembled on 2007-06-22

GenBank Submission: FJ633342

> BO15093.complete
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGGCAAGCTTTCTAGACCAT

BO15093.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-RA 345 CG13365-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-RA 499 CG13365-RA 71..412 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 620804..621145 358..17 1710 100 Minus
X 23542271 X 620421..620598 358..181 680 92.1 Minus
Blast to na_te.dros performed on 2014-11-27 06:52:10 has no hits.

BO15093.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:57 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 1..345 17..362 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:23 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 58..410 9..365 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:03 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 71..412 17..360 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:59 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 58..410 9..365 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:37 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
CG13365-RA 71..412 17..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:37 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
X 620802..621145 17..360 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:03 Download gff for BO15093.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 514835..515178 17..360 99   Minus

BO15093.pep Sequence

Translation from 16 to 376

> BO15093.pep
MALFEMKWLRRWVRRNTNPIPEHRAELWKRRLSIGYAVLAWQAFGLVCYM
VYTGRNDWAKYYGYKTEEEMALSPAQQFAKHLKVEGTGKIIRFSGFHKVE
EVPFDASEVERVKEASFLDH

BO15093.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13365-PA 114 CG13365-PA 1..114 1..114 616 100 Plus