Clone Sequence Records
BO15093.5prime Sequence
374 bp (374 high quality bases) assembled on 2006-06-16
> BO15093.5prime
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGGCAAGCTTTCTAGACC
BO15093.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 345 | CG13365-RA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..412 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:51:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620804..621145 | 358..17 | 1710 | 100 | Minus |
X | 23542271 | X | 620421..620598 | 358..181 | 680 | 92.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:51:07 has no hits.
BO15093.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:46 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..362 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:00 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 17..362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:39 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..417 | 9..365 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:40:11 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..417 | 9..365 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:40:11 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620799..621149 | 9..365 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:39 Download gff for
BO15093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514832..515182 | 9..365 | 98 | | Minus |
BO15093.3prime Sequence
374 bp (374 high quality bases) assembled on 2006-06-16
> BO15093.3prime
ATGGTCTAGAAAGCTTGCCTCCTTGACCCGCTCCACCTCGCTGGCGTCGA
AGGGCACCTCCTCCACCTTGTGGAATCCAGAGAACCTGATGATCTTGCCG
GTCCCCTCGACCTTCAGGTGCTTGGCGAACTGTTGGGCCGGCGAAAGGGC
CATCTCCTCCTCCGTCTTGTAGCCGTAGTACTTGGCCCAGTCGTTGCGTC
CGGTGTAGACCATATAGCAAACGAGGCCGAATGCCTGCCAGGCCAGAACG
GCGTACCCGATGCTCAGGCGCCGCTTCCACAGCTCCGCCCGGTGCTCCGG
TATGGGATTCGTGTTGCGCCGCACCCAGCGGCGCAGCCACTTCATCTCGA
ACAGTGCCATGTCGACTGATAACT
BO15093.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 345 | CG13365-RA | 1..342 | 360..19 | 1710 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..412 | 360..19 | 1710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:01:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620804..621145 | 19..360 | 1710 | 100 | Plus |
X | 23542271 | X | 620421..620598 | 19..196 | 680 | 92.1 | Plus |
Blast to na_te.dros performed on 2015-01-30 19:01:08 has no hits.
BO15093.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:45 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 15..360 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:58 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-PA | 1..345 | 15..360 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:04:38 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..417 | 12..368 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:17:03 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 65..417 | 12..368 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:17:03 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620799..621149 | 12..368 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:04:38 Download gff for
BO15093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514832..515182 | 12..368 | 98 | | Plus |
BO15093.complete Sequence
376 bp assembled on 2007-06-22
GenBank Submission: FJ633342
> BO15093.complete
GAAGTTATCAGTCGACATGGCACTGTTCGAGATGAAGTGGCTGCGCCGCT
GGGTGCGGCGCAACACGAATCCCATACCGGAGCACCGGGCGGAGCTGTGG
AAGCGGCGCCTGAGCATCGGGTACGCCGTTCTGGCCTGGCAGGCATTCGG
CCTCGTTTGCTATATGGTCTACACCGGACGCAACGACTGGGCCAAGTACT
ACGGCTACAAGACGGAGGAGGAGATGGCCCTTTCGCCGGCCCAACAGTTC
GCCAAGCACCTGAAGGTCGAGGGGACCGGCAAGATCATCAGGTTCTCTGG
ATTCCACAAGGTGGAGGAGGTGCCCTTCGACGCCAGCGAGGTGGAGCGGG
TCAAGGAGGCAAGCTTTCTAGACCAT
BO15093.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:52:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 345 | CG13365-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:52:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-RA | 499 | CG13365-RA | 71..412 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:52:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 620804..621145 | 358..17 | 1710 | 100 | Minus |
X | 23542271 | X | 620421..620598 | 358..181 | 680 | 92.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:52:10 has no hits.
BO15093.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:57 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 1..345 | 17..362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:23 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 58..410 | 9..365 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:03 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 71..412 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:59 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 58..410 | 9..365 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:37 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13365-RA | 71..412 | 17..360 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:37 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 620802..621145 | 17..360 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:03 Download gff for
BO15093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 514835..515178 | 17..360 | 99 | | Minus |
BO15093.pep Sequence
Translation from 16 to 376
> BO15093.pep
MALFEMKWLRRWVRRNTNPIPEHRAELWKRRLSIGYAVLAWQAFGLVCYM
VYTGRNDWAKYYGYKTEEEMALSPAQQFAKHLKVEGTGKIIRFSGFHKVE
EVPFDASEVERVKEASFLDH
BO15093.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:41:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13365-PA | 114 | CG13365-PA | 1..114 | 1..114 | 616 | 100 | Plus |