Clone BO15108 Report

Search the DGRC for BO15108

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG11137-RA
Protein status:BO15108.pep: validated full length
Sequenced Size:532

Clone Sequence Records

BO15108.3prime Sequence

530 bp (530 high quality bases) assembled on 2006-06-16

> BO15108.3prime
ATGGTCTAGAAAGCGTGCGACAAACGAAATTCCTCCGCCGTAATATTCCA
GGCGTGTCTGAGGCTGGACAAATGCCAACCAATCGGAGGCGTGGGTGGGG
AGGAGCCCCATGCTCTGGCACTTGTAGAGGGCCAAAGCCACGTTTGCTAG
GTTGCCCAGGAAGTAGACGATGCGCTGGCCAGTTCCCTGGGCCCCCTCCG
CCATTTTGGAAGTCACCTGGGTGGTGAAGATGGCCTTGATAGGCCGGATC
AGCATCATGCCGACCATCATGATGGGAAAAATGGAAATCGAGTTTCCTGA
CATGTACATGATGAATAGATTCATGGGAATGTTCTTAAGAGGTCCCAGGG
CAAGGTCCCACGACTTCTTGATGACCAGGCGCTGGTCGCGCACCACTTCA
CTCTGGTTCACCAAAGCAGATGGATTGTAGCCCAGCGGCGAAGGAATATC
AGCATTTTTGCTCCCGTTAAAGTCCAGCGCCCACTTTAACTTTTTTGGGT
TTTGCTTGGCGGACATGTCGACTGATAACT

BO15108.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-PA 501 CG11137-RA 1..498 516..19 2490 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-RB 957 CG11137-RB 91..589 517..19 2495 100 Minus
CG11137-RA 644 CG11137-RA 91..589 517..19 2495 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22867543..22867854 19..330 1560 100 Plus
3L 28110227 3L 22867907..22868038 331..462 660 100 Plus
3L 28110227 3L 22868097..22868153 461..517 285 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:13:16 has no hits.

BO15108.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:29 Download gff for BO15108.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-PA 1..501 18..516 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:45:57 Download gff for BO15108.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 86..595 10..524 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:36:29 Download gff for BO15108.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 86..595 10..524 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:36:29 Download gff for BO15108.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 22867907..22868036 331..460 100 <- Plus
3L 22868097..22868156 461..524 93   Plus
3L 22867536..22867854 10..330 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:45:57 Download gff for BO15108.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22860636..22860954 10..330 98 <- Plus
arm_3L 22861007..22861136 331..460 100 <- Plus
arm_3L 22861197..22861256 461..524 93   Plus

BO15108.5prime Sequence

530 bp (529 high quality bases) assembled on 2006-05-29

> BO15108.5prime
GAAGTTATCAGTCGACATGTCCGCCAAGCAAAACCCAAAAAAGTTAAAGT
GGGCGCTGGACTTTAACGGGAGCAAAAATGCTGATATTCCTTCGCCGCTG
GGCTACAATCCATCTGCTTTGGTGAACCAGAGTGAAGTGGTGCGCGACCA
GCGCCTGGTCATCAAGAAGTCGTGGGACCTTGCCCTGGGACCTCTTAAGA
ACATTCCCATGAATCTATTCATCATGTACATGTCAGGAAACTCGATTTCC
ATTTTTCCCATCATGATGGTCGGCATGATGCTGATCCGGCCTATCAAGGC
CATCTTCACCACCCAGGTGACTTCCAAAATGGCGGAGGGGGCCCAGGGAA
CTGGCCAGCGCATCGTCTACTTCCTGGGCAACCTAGCAAACGTGGCTTTG
GCCCTCTACAAGTGCCAGAGCATGGGGCTCCTCCCCACCCACGCCTCCGA
TTGGTTGGCATTTGTCCAGCCTCAGACACGCCTGGAATATTACGGCGGAG
GAATTTCGTTTGTCGCAAGCTTTCTAGACC

BO15108.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-PA 501 CG11137-RA 1..498 17..514 2490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-RB 957 CG11137-RB 91..589 16..514 2495 100 Plus
CG11137-RA 644 CG11137-RA 91..589 16..514 2495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22867543..22867854 514..203 1560 100 Minus
3L 28110227 3L 22867907..22868038 202..71 660 100 Minus
3L 28110227 3L 22868097..22868153 72..16 285 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:51:20 has no hits.

BO15108.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:57 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-PA 1..501 17..515 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:12 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-PA 1..501 17..515 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:51:21 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 86..595 9..523 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:26 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 86..595 9..523 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:26 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22867536..22867854 203..523 98 <- Minus
3L 22867907..22868036 73..202 100 <- Minus
3L 22868097..22868156 9..72 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:51:21 Download gff for BO15108.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22860636..22860954 203..523 98 <- Minus
arm_3L 22861007..22861136 73..202 100 <- Minus
arm_3L 22861197..22861256 9..72 93   Minus

BO15108.complete Sequence

532 bp (532 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633343

> BO15108.complete
GAAGTTATCAGTCGACATGTCCGCCAAGCAAAACCCAAAAAAGTTAAAGT
GGGCGCTGGACTTTAACGGGAGCAAAAATGCTGATATTCCTTCGCCGCTG
GGCTACAATCCATCTGCTTTGGTGAACCAGAGTGAAGTGGTGCGCGACCA
GCGCCTGGTCATCAAGAAGTCGTGGGACCTTGCCCTGGGACCTCTTAAGA
ACATTCCCATGAATCTATTCATCATGTACATGTCAGGAAACTCGATTTCC
ATTTTTCCCATCATGATGGTCGGCATGATGCTGATCCGGCCTATCAAGGC
CATCTTCACCACCCAGGTGACTTCCAAAATGGCGGAGGGGGCCCAGGGAA
CTGGCCAGCGCATCGTCTACTTCCTGGGCAACCTAGCAAACGTGGCTTTG
GCCCTCTACAAGTGCCAGAGCATGGGGCTCCTCCCCACCCACGCCTCCGA
TTGGTTGGCATTTGTCCAGCCTCAGACACGCCTGGAATATTACGGCGGAG
GAATTTCGTTTGTCGCAAGCTTTCTAGACCAT

BO15108.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-RB 501 CG11137-PB 1..498 17..514 2490 100 Plus
CG11137-RA 501 CG11137-PA 1..498 17..514 2490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-RB 957 CG11137-RB 91..589 16..514 2495 100 Plus
CG11137-RA 644 CG11137-RA 91..589 16..514 2495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22867543..22867854 514..203 1560 100 Minus
3L 28110227 3L 22867907..22868038 202..71 660 100 Minus
3L 28110227 3L 22868097..22868153 72..16 285 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:35:12 has no hits.

BO15108.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:12 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 1..501 17..515 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:48 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 77..586 9..523 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:28 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 92..589 17..516 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:12 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 77..586 9..523 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:57 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
CG11137-RA 92..589 17..516 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:57 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22867907..22868036 73..202 100 <- Minus
3L 22868097..22868152 17..72 100   Minus
3L 22867541..22867854 203..516 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:28 Download gff for BO15108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22860641..22860954 203..516 99 <- Minus
arm_3L 22861007..22861136 73..202 100 <- Minus
arm_3L 22861197..22861252 17..72 100   Minus

BO15108.pep Sequence

Translation from 16 to 532

> BO15108.pep
MSAKQNPKKLKWALDFNGSKNADIPSPLGYNPSALVNQSEVVRDQRLVIK
KSWDLALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQ
VTSKMAEGAQGTGQRIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFV
QPQTRLEYYGGGISFVASFLDH

BO15108.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11137-PB 166 CG11137-PB 1..166 1..166 856 100 Plus
CG11137-PA 166 CG11137-PA 1..166 1..166 856 100 Plus