Clone BO15110 Report

Search the DGRC for BO15110

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG11263-RA
Protein status:BO15110.pep: validated full length
Sequenced Size:829

Clone Sequence Records

BO15110.3prime Sequence

827 bp (761 high quality bases) assembled on 2006-06-16

> BO15110.3prime
ATGGTCTAGAAAGCTTGCGATCTGCTCGAGTTCCTTGTCGGCCTTTTTGC
AGAATGAATCTAAGAGTTGGAACCCGAAGCTACTGGCAGGTGCCATGTTT
ATGGCGACGTCGCAGGACCGTAAGCCGTAGTAGCTGTGGCTGAACTCTAA
GGATATGCGATAAACCTCGGCGCAAAAGATGTGACTATAATTCAAATGAT
CGTGCATTATGTGTTGAAGCTGGACCAACTTGGCCAAGTATCTCATTTGA
CTGTGGGTCAGTGGACGAGCAGTGAAGTTACGCTGCGACTCACAGCCTCC
AGTCACCTTCTCCATGGGTAGTCCGAAGACGAGAGATATAGCCTCTGGCA
AGGTGTACGGAATTCTTGTGTTGCTGCTCAGGCATACAGCCACAAAGGTA
TCAAATATTCCTCCCAACGAGATGCGTTGCCTATGCAACAGATGATCGGC
GATCCGGTGGCTGTAGTGGATTACCTTGCGCGGCTGATCCGCCTCCAGAA
TCTTGGCCAGTTCCAGAAATATCAAGCCAAGGGCCTTGATGTCGAAAATG
TACGTTCCATTGCACGTGGCTACCACCAAAATAGACGTGGGGTGATGTCG
TCCGTAAAAACTGGGCTCCACCAGCAGCGATATGATCTTCTGATCCTTTA
TGTCCTTTAGTGCACTGTGGTATGTGGTATCCACCTGGTATATCAAAACA
ATTCGATCTAGTTGCTTCTCCAGGATTTCCAGTTCTCGTTTTCCGAAAGG
GTAACGAATGTTTTCCTGGAGACTGTCCAGAGCAAAGCTCTCGTTTCCTT
CGCTCTTGTTCATGTCGACTGATAACT

BO15110.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-PA 798 CG11263-RA 71..795 743..19 3625 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-RB 1017 CG11263-RB 48..842 813..19 3945 99.7 Minus
CG11263-RA 1065 CG11263-RA 96..890 813..19 3945 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13006912..13007706 813..19 3945 99.7 Minus
Blast to na_te.dros performed on 2015-02-12 03:41:50 has no hits.

BO15110.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:58 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-PA 71..798 18..743 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:14 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-PA 71..798 18..743 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:41:27 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..890 19..813 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:51 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..890 19..813 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:51 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 13006912..13007706 19..813 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:41:27 Download gff for BO15110.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13000012..13000806 19..813 99   Minus

BO15110.5prime Sequence

785 bp (757 high quality bases) assembled on 2006-05-29

> BO15110.5prime
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAAATTCATTCTGCAAAA

BO15110.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-PA 798 CG11263-RA 1..769 17..785 3820 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 07:50:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-RB 1017 CG11263-RB 48..816 17..785 3830 99.9 Plus
CG11263-RA 1065 CG11263-RA 96..864 17..785 3830 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13006912..13007680 17..785 3830 99.9 Plus
Blast to na_te.dros performed on 2015-02-02 07:50:23 has no hits.

BO15110.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:59 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-PA 1..765 17..781 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:15 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-PA 1..765 17..781 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:45:13 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..860 17..781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:15:20 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..860 17..781 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:15:20 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13006912..13007676 17..781 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:45:13 Download gff for BO15110.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13000012..13000776 17..781 99   Plus

BO15110.complete Sequence

829 bp (829 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633344

> BO15110.complete
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAGATTCATTCTGCAAAAAGGCCGACAAGGAAC
TCGAGCAGATCGCAAGCTTTCTAGACCAT

BO15110.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-RB 798 CG11263-PB 1..795 17..811 3975 100 Plus
CG11263-RA 798 CG11263-PA 1..795 17..811 3975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-RB 1017 CG11263-RB 48..842 17..811 3975 100 Plus
CG11263-RA 1065 CG11263-RA 96..890 17..811 3975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13006912..13007706 17..811 3975 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:07:57 has no hits.

BO15110.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:27 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 1..798 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:52 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 89..883 17..811 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:12 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..890 17..813 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:27 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 89..883 17..811 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:45 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
CG11263-RA 96..890 17..813 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:45 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13006912..13007706 17..813 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:12 Download gff for BO15110.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13000012..13000806 17..813 99   Plus

BO15110.pep Sequence

Translation from 16 to 829

> BO15110.pep
MNKSDGNESFALDSLPENIRYPFGKRELEILEKQLDRIVLIYQVDTTYHS
ALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTYIFDIKALGLIFL
ELAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVAVCLSSNTR
IPYTLPEAISLVFGLPMEKVTGGCESQRNFTARPLTHSQMRYLAKLVQLQ
HIMHDHLNYSHIFCAEVYRISLEFSHSYYGLRSCDVAINMAPASSFGFQL
LDSFCKKADKELEQIASFLDH

BO15110.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11263-PB 265 CG11263-PB 1..265 1..265 1374 100 Plus
CG11263-PA 265 CG11263-PA 1..265 1..265 1374 100 Plus