Clone Sequence Records
BO15110.3prime Sequence
827 bp (761 high quality bases) assembled on 2006-06-16
> BO15110.3prime
ATGGTCTAGAAAGCTTGCGATCTGCTCGAGTTCCTTGTCGGCCTTTTTGC
AGAATGAATCTAAGAGTTGGAACCCGAAGCTACTGGCAGGTGCCATGTTT
ATGGCGACGTCGCAGGACCGTAAGCCGTAGTAGCTGTGGCTGAACTCTAA
GGATATGCGATAAACCTCGGCGCAAAAGATGTGACTATAATTCAAATGAT
CGTGCATTATGTGTTGAAGCTGGACCAACTTGGCCAAGTATCTCATTTGA
CTGTGGGTCAGTGGACGAGCAGTGAAGTTACGCTGCGACTCACAGCCTCC
AGTCACCTTCTCCATGGGTAGTCCGAAGACGAGAGATATAGCCTCTGGCA
AGGTGTACGGAATTCTTGTGTTGCTGCTCAGGCATACAGCCACAAAGGTA
TCAAATATTCCTCCCAACGAGATGCGTTGCCTATGCAACAGATGATCGGC
GATCCGGTGGCTGTAGTGGATTACCTTGCGCGGCTGATCCGCCTCCAGAA
TCTTGGCCAGTTCCAGAAATATCAAGCCAAGGGCCTTGATGTCGAAAATG
TACGTTCCATTGCACGTGGCTACCACCAAAATAGACGTGGGGTGATGTCG
TCCGTAAAAACTGGGCTCCACCAGCAGCGATATGATCTTCTGATCCTTTA
TGTCCTTTAGTGCACTGTGGTATGTGGTATCCACCTGGTATATCAAAACA
ATTCGATCTAGTTGCTTCTCCAGGATTTCCAGTTCTCGTTTTCCGAAAGG
GTAACGAATGTTTTCCTGGAGACTGTCCAGAGCAAAGCTCTCGTTTCCTT
CGCTCTTGTTCATGTCGACTGATAACT
BO15110.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-PA | 798 | CG11263-RA | 71..795 | 743..19 | 3625 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:41:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-RB | 1017 | CG11263-RB | 48..842 | 813..19 | 3945 | 99.7 | Minus |
CG11263-RA | 1065 | CG11263-RA | 96..890 | 813..19 | 3945 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13006912..13007706 | 813..19 | 3945 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:41:50 has no hits.
BO15110.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:58 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-PA | 71..798 | 18..743 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:14 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-PA | 71..798 | 18..743 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:41:27 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..890 | 19..813 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:51 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..890 | 19..813 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:51 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13006912..13007706 | 19..813 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:41:27 Download gff for
BO15110.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13000012..13000806 | 19..813 | 99 | | Minus |
BO15110.5prime Sequence
785 bp (757 high quality bases) assembled on 2006-05-29
> BO15110.5prime
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAAATTCATTCTGCAAAA
BO15110.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-PA | 798 | CG11263-RA | 1..769 | 17..785 | 3820 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 07:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-RB | 1017 | CG11263-RB | 48..816 | 17..785 | 3830 | 99.9 | Plus |
CG11263-RA | 1065 | CG11263-RA | 96..864 | 17..785 | 3830 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13006912..13007680 | 17..785 | 3830 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-02 07:50:23 has no hits.
BO15110.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:59 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-PA | 1..765 | 17..781 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:15 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-PA | 1..765 | 17..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:45:13 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..860 | 17..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:15:20 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..860 | 17..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:15:20 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13006912..13007676 | 17..781 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:45:13 Download gff for
BO15110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13000012..13000776 | 17..781 | 99 | | Plus |
BO15110.complete Sequence
829 bp (829 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633344
> BO15110.complete
GAAGTTATCAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTC
TGGACAGTCTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTG
GAAATCCTGGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGA
TACCACATACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATAT
CGCTGCTGGTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATT
TTGGTGGTAGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCT
TGGCTTGATATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGC
GCAAGGTAATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGG
CAACGCATCTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCT
GAGCAGCAACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCG
TCTTCGGACTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGT
AACTTCACTGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAA
GTTGGTCCAGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACA
TCTTTTGCGCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTAC
TACGGCTTACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAG
CTTCGGGTTCCAACTCTTAGATTCATTCTGCAAAAAGGCCGACAAGGAAC
TCGAGCAGATCGCAAGCTTTCTAGACCAT
BO15110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:07:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-RB | 798 | CG11263-PB | 1..795 | 17..811 | 3975 | 100 | Plus |
CG11263-RA | 798 | CG11263-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-RB | 1017 | CG11263-RB | 48..842 | 17..811 | 3975 | 100 | Plus |
CG11263-RA | 1065 | CG11263-RA | 96..890 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:07:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13006912..13007706 | 17..811 | 3975 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:07:57 has no hits.
BO15110.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:27 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 1..798 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:52 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 89..883 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:12 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..890 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:27 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 89..883 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:45 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11263-RA | 96..890 | 17..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:45 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13006912..13007706 | 17..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:12 Download gff for
BO15110.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13000012..13000806 | 17..813 | 99 | | Plus |
BO15110.pep Sequence
Translation from 16 to 829
> BO15110.pep
MNKSDGNESFALDSLPENIRYPFGKRELEILEKQLDRIVLIYQVDTTYHS
ALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTYIFDIKALGLIFL
ELAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVAVCLSSNTR
IPYTLPEAISLVFGLPMEKVTGGCESQRNFTARPLTHSQMRYLAKLVQLQ
HIMHDHLNYSHIFCAEVYRISLEFSHSYYGLRSCDVAINMAPASSFGFQL
LDSFCKKADKELEQIASFLDH
BO15110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11263-PB | 265 | CG11263-PB | 1..265 | 1..265 | 1374 | 100 | Plus |
CG11263-PA | 265 | CG11263-PA | 1..265 | 1..265 | 1374 | 100 | Plus |