Clone BO15115 Report

Search the DGRC for BO15115

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG7988-RA
Protein status:BO15115.pep: validated full length
Sequenced Size:862

Clone Sequence Records

BO15115.3prime Sequence

855 bp (706 high quality bases) assembled on 2006-06-16

> BO15115.3prime
ATGGTCTAGAAAGCTTGCTTCAGATTCAAGCTTCAGGGCAGCAAGGCTCG
TCTCCGTTTCCGTGATCAGTTCATCCTCGTTTACCTTCAAGGGAGCACAT
CGTGTCCAGAACGCTTCGTCGTTGCTACCGGGCAAGGATTCCTGGGGGAA
CGTGTGCAGCGACAAGTCGTTGAATACATTGTGGTGCTCGTAGTCATCTT
CCAGCGGAGTTTCTGTACAATGTTCTACTATTCTTGTTATGTGGTCATCC
TGGTTTCTGGGCGTCATGGTCAGCATTTCGAAGCTATTCGAGATGAGAAA
AACGTTGGGCAGTGTCTCCCGCTTCCAATTGGACCACAGGATGTTATGCA
TCAGAGCGTAGGGGCAGTGTGGCAGATAATAGAGCGTGGGCACCGTCGCC
TCGTGCTTGCCCGCGCAGTCTTTGCTCATTATACAACCGTCGAACAGCCG
GATCAGTTCCTTCTCGCTGTCTCTGAAGACGGGATCGAAGTACAAGGCCT
CTCTGATCTTGTGATGCCGATGCAGTCCAATCACAAATGCAGCCTGATGC
AGGGCATGGTAGGTGCGGGAGAAAGGTCCCAGTCCCAGGCAAACAATTCG
CTCCAACGGTTTCCTAATGCCCTCCAGTTGCTGCTGCAGCGCTTCCATGG
CCACCAGAAAGTAGTCGCTTTGGCACATCTCGGTGCACAGGTTCTCAAGG
CGCGGCTGAAATTTCTCCACATTCACATCCGGACAGTCGATTAGGTAATC
GCTTTCGGATTTATGGCGATCCCGCCGCCTCAGGCACTTACGAGCCATCC
ATTTCTTGCGCGTTACCACCTGAAAATCCTCTCCAGAGTTCGACATGTCG
ACTGA

BO15115.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-PA 831 CG7988-RA 60..828 787..19 3845 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:42:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-RA 885 CG7988-RA 33..860 846..19 4140 100 Minus
CG7183-RA 2367 CG7183-RA 1..142 705..846 710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18220764..18221448 703..19 3425 100 Minus
3R 32079331 3R 18220558..18220701 846..703 720 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:42:51 has no hits.

BO15115.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:05 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-PA 60..831 15..787 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:23 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-PA 60..831 15..787 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:41:45 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..863 15..849 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:45:56 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..863 15..849 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:45:56 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 18220556..18220700 704..849 99 -> Minus
3R 18220764..18221447 20..703 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:41:45 Download gff for BO15115.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14046278..14046422 704..849 99 -> Minus
arm_3R 14046486..14047169 20..703 100 -> Minus

BO15115.5prime Sequence

749 bp (661 high quality bases) assembled on 2006-06-16

> BO15115.5prime
GAAGTTATCAGTCGACATGTCGAACTCTGGAGAGGATTTTCAGGTGGTAA
CGCGCAAGAAATGGATGGCTCGTAAGTGCCTGAGGCGGCGGGATCGCCAT
AAATCCGAAAGCGATTACCTAATCGACTGTCCGGATGTGAATGTGGAGAA
ATTTCAGCCGCGCCTTGAGAACCTGTGCACCGAGATGTGCCAAAGCGACT
ACTTTCTGGTGGCCATGGAAGCGCTGCAGCAGCAACTGGAGGGCATTAGG
AAACCGTTGGAGCGAATTGTTTGCCTGGGACTGGGACCTTTCTCCCGCAC
CTACCATGCCCTGCATCAGGCTGCATTTGTGATTGGACTGCATCGGCATC
ACAAGATCAGAGAGGCCTTGTACTTCGATCCCGTCTTCAGAGACAGCGAG
AAGGAACTGATCCGGCTGTTCGACGGTTGTATAATGAGCAAAGACTGCGC
GGGCAAGCACGAGGCGACGGTGCCCACGCTCTATTATCTGCCACACTGCC
CCTACGCTCTGATGCATAACATCCTGTGGTCCAATTGGAAGCGGGAGACA
CTGCCCAACGTTTTTCTCATCTCGAATAGCTTCGAAATGCTGACCATGAC
GCCCAGAAACCAGGATGACCACATAACAAGAATAGTAGAACATTGTACAG
AAACTCCGCTGGAAGATGACTACGAGCACCACAATGTATTCAACGACTTG
TCGCTGCACACGTTCCCCCAGGAATCCTTGCCCGGTAGCAACGACGAAG

BO15115.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-PA 831 CG7988-RA 1..733 17..749 3665 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:42:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-RA 885 CG7988-RA 33..765 17..749 3665 100 Plus
CG7183-RA 2367 CG7183-RA 1..142 158..17 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:42:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18220764..18221353 160..749 2950 100 Plus
3R 32079331 3R 18220558..18220701 17..160 720 100 Plus
Blast to na_te.dros performed on 2015-02-09 22:42:38 has no hits.

BO15115.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:06 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-PA 1..733 17..749 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:24 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-PA 1..733 17..749 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:22:44 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..765 14..749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:47:51 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..765 14..749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:47:51 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18220556..18220700 14..159 99 -> Plus
3R 18220764..18221353 160..749 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:22:44 Download gff for BO15115.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14046278..14046422 14..159 99 -> Plus
arm_3R 14046486..14047075 160..749 100   Plus

BO15115.complete Sequence

862 bp (862 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633345

> BO15115.complete
GAAGTTATCAGTCGACATGTCGAACTCTGGAGAGGATTTTCAGGTGGTAA
CGCGCAAGAAATGGATGGCTCGTAAGTGCCTGAGGCGGCGGGATCGCCAT
AAATCCGAAAGCGATTACCTAATCGACTGTCCGGATGTGAATGTGGAGAA
ATTTCAGCCGCGCCTTGAGAACCTGTGCACCGAGATGTGCCAAAGCGACT
ACTTTCTGGTGGCCATGGAAGCGCTGCAGCAGCAACTGGAGGGCATTAGG
AAACCGTTGGAGCGAATTGTTTGCCTGGGACTGGGACCTTTCTCCCGCAC
CTACCATGCCCTGCATCAGGCTGCATTTGTGATTGGACTGCATCGGCATC
ACAAGATCAGAGAGGCCTTGTACTTCGATCCCGTCTTCAGAGACAGCGAG
AAGGAACTGATCCGGCTGTTCGACGGTTGTATAATGAGCAAAGACTGCGC
GGGCAAGCACGAGGCGACGGTGCCCACGCTCTATTATCTGCCACACTGCC
CCTACGCTCTGATGCATAACATCCTGTGGTCCAATTGGAAGCGGGAGACA
CTGCCCAACGTTTTTCTCATCTCGAATAGCTTCGAAATGCTGACCATGAC
GCCCAGAAACCAGGATGACCACATAACAAGAATAGTAGAACATTGTACAG
AAACTCCGCTGGAAGATGACTACGAGCACCACAATGTATTCAACGACTTG
TCGCTGCACACGTTCCCCCAGGAATCCTTGCCCGGTAGCAACGACGAAGC
GTTCTGGACACGATGTGCTCCCTTGAAGGTAAACGAGGATGAACTGATCA
CGGAAACGGAGACGAGCCTTGCTGCCCTGAAGCTTGAATCTGAAGCAAGC
TTTCTAGACCAT

BO15115.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-RA 831 CG7988-PA 1..828 17..844 4140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-RA 885 CG7988-RA 33..860 17..844 4140 100 Plus
CG7183-RA 2367 CG7183-RA 1..142 158..17 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18220764..18221448 160..844 3425 100 Plus
3R 32079331 3R 18220558..18220701 17..160 720 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:48:38 has no hits.

BO15115.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:28 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 1..831 17..848 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:54 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..863 14..848 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:50 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 33..860 17..846 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:28 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 31..863 14..848 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:20 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
CG7988-RA 33..860 17..846 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:20 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18220558..18220700 17..159 100 -> Plus
3R 18220764..18221448 160..846 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:50 Download gff for BO15115.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14046280..14046422 17..159 100 -> Plus
arm_3R 14046486..14047170 160..846 99   Plus

BO15115.pep Sequence

Translation from 16 to 862

> BO15115.pep
MSNSGEDFQVVTRKKWMARKCLRRRDRHKSESDYLIDCPDVNVEKFQPRL
ENLCTEMCQSDYFLVAMEALQQQLEGIRKPLERIVCLGLGPFSRTYHALH
QAAFVIGLHRHHKIREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEA
TVPTLYYLPHCPYALMHNILWSNWKRETLPNVFLISNSFEMLTMTPRNQD
DHITRIVEHCTETPLEDDYEHHNVFNDLSLHTFPQESLPGSNDEAFWTRC
APLKVNEDELITETETSLAALKLESEASFLDH

BO15115.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7988-PA 276 CG7988-PA 1..276 1..276 1494 100 Plus