Clone Sequence Records
BO15117.3prime Sequence
759 bp (652 high quality bases) assembled on 2006-05-29
> BO15117.3prime
ATGGTCTAGAAAGCTTGCATTTACCTCCTCCTGGTTGCAATGTTCTACTT
TACGGACTTCATATAGCCTTTCGTCCATCAGTTTGAGCACTTCTAAGCCA
ATTGAAGTGAAGTGGGGATGCAGATATCGGGCAAACAGCTCCAGGCAGTT
TGGTTCCAGCTGGTCCTTATCCAACAGGAGGTGCTCCCTCAGCCAAGACA
GCAGTGGTGGCTTGTGGGAATGCACAATGCTGGGCACGCTGAAGATCAGC
TCGGTCTGTTGGATATCTTTTCCATAGTTTTCAGAAGCATCGGAGCGACA
GGCCACGTAGAGCATCTCGTAAGGCTGCTTCTGGGTGAGATCCGACTGCG
GGGGAGCAATTAGTTCATGGTCTGTGCTAAGTTTGTACCATCGGAGCTTG
TGGAGCAACCGGAGATTCCAACTGGGCAGCAGCTGCTGCTCCAGGGCCAA
CTGATGCAGCGTCGAATTGGTGCACCAGATGGCCACCAGTGACCGTGGGT
GCGTAAGCTTCGAGAGCGGTATGTGCGACAATTGCTCATTGCTCAGCATC
GAGTATCCCAGCTCCGGCTTGGCCCGCTTCAGCCTGCGGATGTACTTATT
CCGCCACGGAGGATCCAGCACGATGAGATCGTAGGCGGGCAGAAGTTGGT
GCAGTAGTGCAGGCAGATTGTCCACATTGTGGTTGAAGAATCGGGATTGA
TTGGGAATCAAGTACACGCCACGGGATCCATCAACTCTCAAAAACCGCTG
CATCCGTCC
BO15117.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-PA | 1080 | CG14906-RA | 337..1077 | 759..19 | 3680 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-RC | 1177 | CG14906-RC | 369..1109 | 759..19 | 3690 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16650049..16650789 | 19..759 | 3690 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:04:39 has no hits.
BO15117.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:07 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-PA | 337..1080 | 18..759 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:25 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-PA | 337..1080 | 18..759 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:20:23 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 369..1114 | 12..759 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:35:53 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 369..1114 | 12..759 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:35:53 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16650044..16650789 | 12..759 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:20:23 Download gff for
BO15117.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12475766..12476511 | 12..759 | 99 | | Plus |
BO15117.5prime Sequence
804 bp (737 high quality bases) assembled on 2006-06-16
> BO15117.5prime
GAAGTTATCAGTCGACATGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGAAGCAGCCTTACGAGATGC
TCTA
BO15117.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-PA | 1080 | CG14906-RA | 1..788 | 17..804 | 3940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-RC | 1177 | CG14906-RC | 33..820 | 17..804 | 3940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16650338..16651125 | 804..17 | 3940 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 13:14:13 has no hits.
BO15117.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:08 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-PA | 1..787 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:27 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-PA | 1..787 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:08:43 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 25..819 | 6..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:36:49 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 25..819 | 6..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:36:49 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16650339..16651133 | 6..803 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:08:43 Download gff for
BO15117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12476061..12476855 | 6..803 | 99 | | Minus |
BO15117.complete Sequence
1111 bp (1111 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633346
> BO15117.complete
GAAGTTATCAGTCGACATGTTGAAATTGCAAAAGAAAACTGAAGATTCGA
AATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGCATATGAC
GAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAAAGACGGA
CAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAAGCCGGCG
TAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGAATATCTA
GAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGATGAAGAG
GCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCCAACGAAA
GTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGGCGTGTAC
TTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACAATCTGCC
TGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTGCTGGATC
CTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAAGCCGGAG
CTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATACCGCTCTC
GAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACCAATTCGA
CGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTGGAATCTC
CGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACCATGAACT
AATTGCTCCCCCGCAGTCGGATCTCACCCAGAAGCAGCCTTACGAGATGC
TCTACGTGGCCTGTCGCTCCGATGCTTCTGAAAACTATGGAAAAGATATC
CAACAGACCGAGCTGATCTTCAGCGTGCCCAGCATTGTGCATTCCCACAA
GCCACCACTGCTGTCTTGGCTGAGGGAGCACCTCCTGTTGGATAAGGACC
AGCTGGAACCAAACTGCCTGGAGCTGTTTGCCCGATATCTGCATCCCCAC
TTCACTTCAATTGGCTTAGAAGTGCTCAAACTGATGGACGAAAGGCTATA
TGAAGTCCGTAAAGTAGAACATTGCAACCAGGAGGAGGTAAATGCAAGCT
TTCTAGACCAT
BO15117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-RC | 1080 | CG14906-PC | 1..1077 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-RC | 1177 | CG14906-RC | 33..1109 | 17..1093 | 5385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16650049..16651125 | 1093..17 | 5385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:56:23 has no hits.
BO15117.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:29 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RB | 1..1080 | 17..1094 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:55 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14907-RB | 1143..2232 | 6..1100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:21 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 38..1109 | 22..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:29 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14907-RB | 1143..2232 | 6..1100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:19 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 38..1109 | 22..1095 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:19 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16650045..16651120 | 22..1095 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:21 Download gff for
BO15117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12475767..12476842 | 22..1095 | 99 | | Minus |
BO15117.pep Sequence
Translation from 16 to 1111
> BO15117.pep
MLKLQKKTEDSKFAVFLDHKTLINEAYDEFKLKSELFQFHAKKTDKGIEE
DKTRKRKRKAGVEDASSLEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDG
YNVPQLHGANESGRMQRFLRVDGSRGVYLIPNQSRFFNHNVDNLPALLHQ
LLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLSNEQLSHIPLSKLTHP
RSLVAIWCTNSTLHQLALEQQLLPSWNLRLLHKLRWYKLSTDHELIAPPQ
SDLTQKQPYEMLYVACRSDASENYGKDIQQTELIFSVPSIVHSHKPPLLS
WLREHLLLDKDQLEPNCLELFARYLHPHFTSIGLEVLKLMDERLYEVRKV
EHCNQEEVNASFLDH
BO15117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-PC | 359 | CG14906-PC | 1..359 | 1..359 | 1899 | 100 | Plus |
