Clone BO15130 Report

Search the DGRC for BO15130

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG9769-RA
Protein status:BO15130.pep: validated full length
Sequenced Size:874

Clone Sequence Records

BO15130.3prime Sequence

848 bp (808 high quality bases) assembled on 2006-06-16

> BO15130.3prime
ATGGTCTAGAAAGCTTGCGGCGGTGGGCAGGAAGGTGAGCTTTTCGTTAA
GCTGCAGCTGGGTTTTGATGAGCTGGGAGAGCGTGATGACCAGCAGAAGG
TTGCGTACGTTGGCGTTGAACATCTGAGTGAACTGCTCGTGGGTCATGTG
CGGCACGGAGTGGATAAGGTCTAGCAGCTGGCGTCCGACGGCGTTGTCGG
GGGTTACCTTGTGAGCGATCACGTCGTCAACGTACTTGAGAATAAGATCC
AGCAGGGACTGCAGCTTCGTGGAGGCCTCCGAGATTTGGGCCAGGTCCAG
CATTGGCGGAACGGTCTTGGGACGGTGAGCGGGCGAAACGCCTACGGTCT
TCTGAAGCAGCTTGAGCCCAAATGTCTCCGGCTCGTAGCTGGTCAGCTCG
ACAGGAATGGGCGTGAACATGCAGCCGCTCTTGCCGCCGGGAACTCCTAG
TTGAATGCAGACATAAGCACGCAGACCCATACGTCCGCCCTGCAGCGAAG
TGTCCACGGTGAGGTGAACCGGGTTGTTGCATTCGCGGGCGTAATACTCG
TGGATCACCGAGCTGTGGTTGGTAACGTCGTTGCCGGTGGCCCACCAGCC
TACCACGCTCTCGTTGGAGTTCACCTTGCGGTTGAGGTCGTACATGTCCA
GGGCGTAGCTCAGCTCTGCCTCCACCTGGTCATCGTGCTCCTTGTGCGGC
ACACAGAAACAGTTGGTAACCTCCACCACACCTTTGTCCACAGAGCCGAG
CAGGGTGCCGATGACGCGGTGCGAGTCCGCGTTCCGCCGCTCGAAGGCGT
CCACCACCTGGAAAAGCACCACCGGGTGCACGCGCACGGTCAGATTGA

BO15130.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-PA 843 CG9769-RA 11..840 848..19 4150 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-RA 1301 CG9769-RA 108..937 848..19 4150 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4713246..4714075 19..848 4150 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:00:03 has no hits.

BO15130.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:34 Download gff for BO15130.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-PA 12..843 18..847 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:21:55 Download gff for BO15130.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 109..937 19..847 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:06:21 Download gff for BO15130.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 109..937 19..847 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:21 Download gff for BO15130.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4713246..4714074 19..847 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:21:55 Download gff for BO15130.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 538968..539796 19..847 100   Plus

BO15130.5prime Sequence

872 bp (818 high quality bases) assembled on 2006-06-16

> BO15130.5prime
GAAGTTATCAGTCGACATGTCGGCTCTCAATCTGACCGTGCGCGTGCACC
CGGTGGTGCTTTTCCAGGTGGTGGACGCCTTCGAGCGGCGGAACGCGGAC
TCGCACCGCGTCATCGGCACCCTGCTCGGCTCTGTGGACAAAGGTGTGGT
GGAGGTTACCAACTGTTTCTGTGTGCCGCACAAGGAGCACGATGACCAGG
TGGAGGCAGAGCTGAGCTACGCCCTGGACATGTACGACCTCAACCGCAAG
GTGAACTCCAACGAGAGCGTGGTAGGCTGGTGGGCCACCGGCAACGACGT
TACCAACCACAGCTCGGTGATCCACGAGTATTACGCCCGCGAATGCAACA
ACCCGGTTCACCTCACCGTGGACACTTCGCTGCAGGGCGGACGTATGGGT
CTGCGTGCTTATGTCTGCATTCAACTAGGAGTTCCCGGCGGCAAGAGCGG
CTGCATGTTCACGCCCATTCCTGTCGAGCTGACCAGCTACGAGCCGGAGA
CATTTGGGCTCAAGCTGCTTCAGAAGACCGTAGGCGTTTCGCCCGCTCAC
CGTCCCAAGACCGTTCCGCCAATGCTGGACCTGGCCCAAATCTCGGAGGC
CTCCACGAAGCTGCAGTCCCTGCTGGATCTTATTCTCAAGTACGTTGACG
ACGTGATCGCTCACAAGGTAACCCCCGACAACGCCGTCGGACGCCAGCTG
CTAGACCTTATCCACTCCGTGCCGCACATGACCCACGAGCAGTTCACTCA
GATGTTCAACGCCAACGTACGCAACCTTCTGCTGGTCATCACGCTCTCCC
AGCTCATCAAAACCCAGCTGCAGCTTAACGAAAAGCTCACCTTCCTGCCC
ACCGCCGCAAGCTTTCTAAACC

BO15130.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-PA 843 CG9769-RA 1..808 17..824 3990 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-RA 1301 CG9769-RA 97..937 16..856 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4713246..4714086 856..16 4205 100 Minus
Blast to na_te.dros performed on 2015-02-04 01:59:04 has no hits.

BO15130.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:21 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-PA 1..808 17..824 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:43 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-PA 1..808 17..824 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:41:32 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 97..937 16..856 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:18:50 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 97..937 16..856 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:18:50 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4713246..4714086 16..856 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:41:32 Download gff for BO15130.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 538968..539808 16..856 100   Minus

BO15130.complete Sequence

874 bp (874 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633352

> BO15130.complete
GAAGTTATCAGTCGACATGTCGGCTCTCAATCTGACCGTGCGCGTGCACC
CGGTGGTGCTTTTCCAGGTGGTGGACGCCTTCGAGCGGCGGAACGCGGAC
TCGCACCGCGTCATCGGCACCCTGCTCGGCTCTGTGGACAAAGGTGTGGT
GGAGGTTACCAACTGTTTCTGTGTGCCGCACAAGGAGCACGATGACCAGG
TGGAGGCAGAGCTGAGCTACGCCCTGGACATGTACGACCTCAACCGCAAG
GTGAACTCCAACGAGAGCGTGGTAGGCTGGTGGGCCACCGGCAACGACGT
TACCAACCACAGCTCGGTGATCCACGAGTATTACGCCCGCGAATGCAACA
ACCCGGTTCACCTCACCGTGGACACTTCGCTGCAGGGCGGACGTATGGGT
CTGCGTGCTTATGTCTGCATTCAACTAGGAGTTCCCGGCGGCAAGAGCGG
CTGCATGTTCACGCCCATTCCTGTCGAGCTGACCAGCTACGAGCCGGAGA
CATTTGGGCTCAAGCTGCTTCAGAAGACCGTAGGCGTTTCGCCCGCTCAC
CGTCCCAAGACCGTTCCGCCAATGCTGGACCTGGCCCAAATCTCGGAGGC
CTCCACGAAGCTGCAGTCCCTGCTGGATCTTATTCTCAAGTACGTTGACG
ACGTGATCGCTCACAAGGTAACCCCCGACAACGCCGTCGGACGCCAGCTG
CTAGACCTTATCCACTCCGTGCCGCACATGACCCACGAGCAGTTCACTCA
GATGTTCAACGCCAACGTACGCAACCTTCTGCTGGTCATCACGCTCTCCC
AGCTCATCAAAACCCAGCTGCAGCTTAACGAAAAGCTCACCTTCCTGCCC
ACCGCCGCAAGCTTTCTAGACCAT

BO15130.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-RA 843 CG9769-PA 1..840 17..856 4200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-RA 1301 CG9769-RA 97..937 16..856 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4713246..4714086 856..16 4205 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:32:23 has no hits.

BO15130.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:21 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 1..843 17..857 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:44 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 111..951 16..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:57:34 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 98..937 17..858 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:21 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 111..951 16..856 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:48 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
CG9769-RA 98..937 17..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:48 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4713244..4714085 17..858 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:57:34 Download gff for BO15130.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 538966..539807 17..858 99   Minus

BO15130.pep Sequence

Translation from 16 to 874

> BO15130.pep
MSALNLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNC
FCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSS
VIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTP
IPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQ
SLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNAN
VRNLLLVITLSQLIKTQLQLNEKLTFLPTAASFLDH

BO15130.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG9769-PA 280 CG9769-PA 1..280 1..280 1453 100 Plus
CG8335-PA 286 CG8335-PA 7..281 3..275 596 40.1 Plus
Rpn8-PC 338 CG3416-PC 11..276 8..271 259 28.7 Plus
Rpn8-PA 338 CG3416-PA 11..276 8..271 259 28.7 Plus
Rpn8-PB 358 CG3416-PB 11..276 8..271 259 28.7 Plus