Clone BO15133 Report

Search the DGRC for BO15133

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG2444-RA
Protein status:BO15133.pep: validated full length
Sequenced Size:376

Clone Sequence Records

BO15133.5prime Sequence

374 bp (374 high quality bases) assembled on 2006-06-16

> BO15133.5prime
GAAGTTATCAGTCGACATGTCGCAGTTTAGCACCGTTGCCGCATTCCTAC
TCCTCGGCCTGGTCGTCATCCTTGGCGGCCACGTTGGCCAGGCGGCCGTT
GCCAAGGTCAAACTGAACAATTCATCGCATCCCGGCAAGTGTGTGCTGGA
CACGAACACGATCCTGTCGCCCGGGGAGACGGGTCTGGCGCCGGATCTGC
CATGCGTGCGGGCCGAATGCCATGCGGATGGCTTGGTGACCTTCAAAACC
TGCGATGCAGTCGCTCCGCCACCGGGCTGCAAGCAGCGCGACTTTGTGAA
CATCAATCGCGAATTTCCCGCTTGCTGCGAGCGGAAATACAATTGCGACA
AGCACATCGCAAGCTTTCTAGACC

BO15133.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-PA 345 CG2444-RA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-RB 913 CG2444-RB 373..714 17..358 1710 100 Plus
CG2444-RA 638 CG2444-RA 98..439 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11704509..11704741 358..126 1165 100 Minus
X 23542271 X 11704820..11704928 125..17 545 100 Minus
Blast to na_te.dros performed on 2015-02-12 17:03:09 has no hits.

BO15133.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:22 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-PA 1..345 17..362 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:44 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-PA 1..345 17..362 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:27:33 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 94..442 9..362 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:04:40 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 94..442 9..362 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:04:40 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11704506..11704741 126..362 99 <- Minus
X 11704820..11704932 9..125 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:27:33 Download gff for BO15133.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11598539..11598774 126..362 99 <- Minus
arm_X 11598853..11598965 9..125 96   Minus

BO15133.3prime Sequence

374 bp (374 high quality bases) assembled on 2006-06-16

> BO15133.3prime
ATGGTCTAGAAAGCTTGCGATGTGCTTGTCGCAATTGTATTTCCGCTCGC
AGCAAGCGGGAAATTCGCGATTGATGTTCACAAAGTCGCGCTGCTTGCAG
CCCGGTGGCGGAGCGACTGCATCGCAGGTTTTGAAGGTCACCAAGCCATC
CGCATGGCATTCGGCCCGCACGCATGGCAGATCCGGCGCCAGACCCGTCT
CCCCGGGCGACAGGATCGTGTTCGTGTCCAGCACACACTTGCCGGGATGC
GATGAATTGTTCAGTTTGACCTTGGCAACGGCCGCCTGGCCAACGTGGCC
GCCAAGGATGACGACCAGGCCGAGGAGTAGGAATGCGGCAACGGTGCTAA
ACTGCGACATGTCGACTGATAACT

BO15133.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-PA 345 CG2444-RA 1..342 360..19 1710 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-RB 913 CG2444-RB 373..714 360..19 1710 100 Minus
CG2444-RA 638 CG2444-RA 98..439 360..19 1710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11704509..11704741 19..251 1165 100 Plus
X 23542271 X 11704820..11704928 252..360 545 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:03:38 has no hits.

BO15133.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:36 Download gff for BO15133.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-PA 1..345 15..360 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:10:04 Download gff for BO15133.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 94..442 15..368 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:42:03 Download gff for BO15133.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 94..442 15..368 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:42:03 Download gff for BO15133.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11704506..11704741 15..251 99 <- Plus
X 11704820..11704932 252..368 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:10:04 Download gff for BO15133.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11598539..11598774 15..251 99 <- Plus
arm_X 11598853..11598965 252..368 96   Plus

BO15133.complete Sequence

376 bp (376 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633353

> BO15133.complete
GAAGTTATCAGTCGACATGTCGCAGTTTAGCACCGTTGCCGCATTCCTAC
TCCTCGGCCTGGTCGTCATCCTTGGCGGCCACGTTGGCCAGGCGGCCGTT
GCCAAGGTCAAACTGAACAATTCATCGCATCCCGGCAAGTGTGTGCTGGA
CACGAACACGATCCTGTCGCCCGGGGAGACGGGTCTGGCGCCGGATCTGC
CATGCGTGCGGGCCGAATGCCATGCGGATGGCTTGGTGACCTTCAAAACC
TGCGATGCAGTCGCTCCGCCACCGGGCTGCAAGCAGCGCGACTTTGTGAA
CATCAATCGCGAATTTCCCGCTTGCTGCGAGCGGAAATACAATTGCGACA
AGCACATCGCAAGCTTTCTAGACCAT

BO15133.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:11:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-RB 345 CG2444-PB 1..342 17..358 1710 100 Plus
CG2444-RA 345 CG2444-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-RB 913 CG2444-RB 373..714 17..358 1710 100 Plus
CG2444-RA 638 CG2444-RA 98..439 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11704509..11704741 358..126 1165 100 Minus
X 23542271 X 11704820..11704928 125..17 545 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:11:08 has no hits.

BO15133.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:39 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 1..345 17..362 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:56 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 80..428 9..362 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:47 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 98..439 17..360 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:40 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 80..428 9..362 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:51 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
CG2444-RA 98..439 17..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:51 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
X 11704507..11704741 126..360 99 <- Minus
X 11704820..11704928 17..125 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:47 Download gff for BO15133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11598540..11598774 126..360 99 <- Minus
arm_X 11598853..11598961 17..125 100   Minus

BO15133.pep Sequence

Translation from 16 to 376

> BO15133.pep
MSQFSTVAAFLLLGLVVILGGHVGQAAVAKVKLNNSSHPGKCVLDTNTIL
SPGETGLAPDLPCVRAECHADGLVTFKTCDAVAPPPGCKQRDFVNINREF
PACCERKYNCDKHIASFLDH

BO15133.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG2444-PB 114 CG2444-PB 1..114 1..114 616 100 Plus
CG2444-PA 114 CG2444-PA 1..114 1..114 616 100 Plus
CG34178-PC 112 CG34178-PC 8..112 10..111 146 32.4 Plus
CG34178-PB 112 CG34178-PB 8..112 10..111 146 32.4 Plus
CG34178-PA 112 CG34178-PA 8..112 10..111 146 32.4 Plus