Clone BO15135 Report

Search the DGRC for BO15135

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG18745-RA
Protein status:BO15135.pep: validated full length
Sequenced Size:1333

Clone Sequence Records

BO15135.3prime Sequence

805 bp (714 high quality bases) assembled on 2006-05-29

> BO15135.3prime
ATGGTCTAGAAAGCTTGCTAGCCACGTTCCCTTGTCTTTGTCCACATCCA
TGGCCGGATTGACAAAGGCCCTCTCTGCCATATAATTCTGCGTATAATCC
GTCGGCGGCGGAGCTGAGGGACTGGGTATGTCGAAGACCGGATAGAGTGG
CTTATAAGCACCGCCATCCAAACTGAGAGTATTGGGCGGTACTGGTTCCG
GGTCGTCTAAGTCGTCTGACCTCGTTGCAGCCGTGCTGCGCATGTGAACA
GCCTCCTGATAGTTGGGCGGAGGAATGGATGCGTCGACAGACCATGGACT
TGAAGAGTTTGGAGCAGTGGCTACTTCTTCAACAGCCAGCTCATTAACAT
TCAGCTGGGGGACGAAACCCCGAGGCTGGATTGGTACGTGTTGTGCAAGA
GGGACACTGCCAATGGTCAGCGGAATGGTGACAACCTCGTTGTTGTGGCA
ACCCTTCACCCTGGCCTCCACCTCCACTTGGTAGGCGATCTGGATGATGC
CGCACAGGTTGAAGCAGGTGGGCGGAGTGGCCGGGACTCTGATCTCATAG
CTAAATAGCTTCTTGCAGTTCCTTTGCACAGCGTCCCCCTTGAAGGTGTT
TACCACCAACCTCTCGGACGTGGTATTGGGCATCGAAGGTGGCTTACTGT
GGTATGTCACCAGCATCACAAAACTAATGAGGAGCTGCTCCACCGGAATG
TGGCTATCGTTTGTGACCGGCACGCTAAGGGGAACATTCTGGCCAGGTAA
CAATCCTGTCTGTGGAACGGTCAGTTGGAGGGCCAACGGATCTGATCGGC
AGGGC

BO15135.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-PA 1302 CG18745-RA 517..1299 801..19 3840 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:14:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-RA 1567 CG18745-RA 679..1465 805..19 3875 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7784264..7784796 273..805 2605 99.2 Plus
3R 32079331 3R 7783945..7784198 19..272 1270 100 Plus
Blast to na_te.dros performed on 2015-02-11 18:14:29 has no hits.

BO15135.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:23 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-PA 513..1302 16..805 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:46 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-PA 513..1302 16..805 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:30:52 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 679..1465 19..805 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:39:49 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 679..1465 19..805 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:39:49 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 7783945..7784198 19..272 100 <- Plus
3R 7784264..7784796 273..805 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:30:52 Download gff for BO15135.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3609667..3609920 19..272 100 <- Plus
arm_3R 3609986..3610518 273..805 99   Plus

BO15135.5prime Sequence

778 bp (703 high quality bases) assembled on 2006-06-16

> BO15135.5prime
GAAGTTATCAGTCGACATGACTGTTACCTGTGAAATTGATTTCGATAACA
ATCCCCATGGCACCTACTTTGGGGGCGAGGTACTCACTGGCAGAGTTACG
TTGAAGCTGGACAAGATGAAGTTGGTAAAAGCCATCACCTTGAATATAAC
CGGATACGCAGAGACGCGTTGGATTGAAAGGGTGACCACAAACAGAAGGA
GGAGACGTCGCACATTCTGCGGCCGCGAGGATTACATAGCGTCCAAAACA
TTTTTGGTGGGATCCAATCTGAGCAGCCAAGTATCCATTGAAGCGGGAAT
TCACACTTACAACTTCGTGTGCCTGATTCCCACCGAATGTCCTTCGTCCT
TCGAGGGATCACACGGCAGGGTGCGGTACATGGCAACCGTAACCCTCGTC
AGGCCCTGGAAATTCGATCAGAGCTATACCCGATGCTTTACGGTGCTAAA
AGTGATGGACTTGAACTTCGATAGTCCACTGCTAAGGGTACCCGCCCACA
GTGAAACCTCGAAGACCTACTGCTGCTGGCCTTGCCGATCAGATCCGTTG
GCCCTCCAACTGACCGTTCCACAGACAGGATTTGTACCTGGCCAGAATGT
TCCCCTTAGCGTGCTGGTCACAAACGATAGCCACATTCCGGTGGAGCAGC
TCCTCATTAGTTTTGTGATGCTGGTGACATACCACAGTAAGCCACCTTCG
ATGCCCAATACCACGTCCGAGAGGTTGGTGGTAAACACCTTCAAGGGGGA
CGCTGTGCAAAGGAACTGCAAGAAGCTA

BO15135.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-PA 1302 CG18745-RA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-RA 1567 CG18745-RA 167..928 17..778 3810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7784547..7784838 778..487 1460 100 Minus
3R 32079331 3R 7784901..7785116 491..276 1080 100 Minus
3R 32079331 3R 7785173..7785319 276..130 735 100 Minus
3R 32079331 3R 7785839..7785953 131..17 575 100 Minus
Blast to na_te.dros performed on 2015-02-09 22:41:45 has no hits.

BO15135.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:25 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-PA 1..761 17..777 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:47 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-PA 1..761 17..777 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:22:37 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..927 17..777 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:47:40 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..927 17..777 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:47:40 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7784548..7784837 488..777 100 <- Minus
3R 7784905..7785116 276..487 100 <- Minus
3R 7785174..7785317 132..275 100 <- Minus
3R 7785839..7785953 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:22:37 Download gff for BO15135.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3610270..3610559 488..777 100 <- Minus
arm_3R 3610627..3610838 276..487 100 <- Minus
arm_3R 3610896..3611039 132..275 100 <- Minus
arm_3R 3611561..3611675 17..131 100   Minus

BO15135.complete Sequence

1333 bp (1333 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633354

> BO15135.complete
GAAGTTATCAGTCGACATGACTGTTACCTGTGAAATTGATTTCGATAACA
ATCCCCATGGCACCTACTTTGGGGGCGAGGTACTCACTGGCAGAGTTACG
TTGAAGCTGGACAAGATGAAGTTGGTAAAAGCCATCACCTTGAATATAAC
CGGATACGCAGAGACGCGTTGGATTGAAAGGGTGACCACAAACAGAAGGA
GGAGACGTCGCACATTCTGCGGCCGCGAGGATTACATAGCGTCCAAAACA
TTTTTGGTGGGATCCAATCTGAGCAGCCAAGTATCCATTGAAGCGGGAAT
TCACACTTACAACTTCGTGTGCCTGATTCCCACCGAATGTCCTTCGTCCT
TCGAGGGATCACACGGCAGGGTGCGGTACATGGCAACCGTAACCCTCGTC
AGGCCCTGGAAATTCGATCAGAGCTATACCCGATGCTTTACGGTGCTAAA
AGTGATGGACTTGAACTTCGATAGTCCACTGCTAAGGGTACCCGCCCACA
GTGAAACCTCGAAGACCTACTGCTGCTGGCCTTGCCGATCAGATCCGTTG
GCCCTCCAACTGACCGTTCCACAGACAGGATTTGTACCTGGCCAGAATGT
TCCCCTTAGCGTGCTGGTCACAAACGATAGCCACATTCCGGTGGAGCAGC
TCCTCATTAGTTTTGTGATGCTGGTGACATACCACAGTAAGCCACCTTCG
ATGCCCAATACCACGTCCGAGAGGTTGGTGGTAAACACCTTCAAGGGGGA
CGCTGTGCAAAGGAACTGCAAGAAGCTATTTAGCTATGAGATCAGAGTCC
CGGCCACTCCGCCCACCTGCTTCAACCTGTGCGGCATCATCCAGATCGCC
TACCAAGTGGAGGTGGAGGCCAGGGTGAAGGGTTGCCACAACAACGAGGT
TGTCACCATTCCGCTGACCATTGGCAGTGTCCCTCTTGCACAACACGTAC
CAATCCAGCCTCGGGGTTTCGTCCCCCAGCTGAATGTTAATGAGCTGGCT
GTTGAAGAAGTAGCCACTGCTCCAAACTCTTCAAGTCCATGGTCTGTCGA
CGCATCCATTCCTCCGCCCAACTATCAGGAGGCTGTTCACATGCGCAGCA
CGGCTGCAACGAGGTCAGACGACTTAGACGACCCGGAACCAGTACCGCCC
AATACTCTCAGTTTGGATGGCGGTGCTTATAAGCCACTCTATCCGGTCTT
CGACATACCCAGTCCCTCAGCTCCGCCGCCGACGGATTATACGCAGAATT
ATATGGCAGAGAGGGCCTTTGTCAATCCGGCCATGGATGTGGACAAAGAC
AAGGGAACGTGGCTAGCAAGCTTTCTAGACCAT

BO15135.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-RA 1302 CG18745-PA 1..1299 17..1315 6495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-RA 1567 CG18745-RA 167..1465 17..1315 6495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7784264..7784838 1061..487 2875 100 Minus
3R 32079331 3R 7783945..7784198 1315..1062 1270 100 Minus
3R 32079331 3R 7784901..7785116 491..276 1080 100 Minus
3R 32079331 3R 7785173..7785319 276..130 735 100 Minus
3R 32079331 3R 7785839..7785953 131..17 575 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:23:14 has no hits.

BO15135.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:22 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 1..1302 17..1318 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:46 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..1465 17..1315 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:29:20 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..1465 17..1317 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:22 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..1465 17..1315 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:17:18 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
CG18745-RA 167..1465 17..1317 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:17:18 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7783942..7784198 1062..1317 99 <- Minus
3R 7784264..7784837 488..1061 100 <- Minus
3R 7784905..7785116 276..487 100 <- Minus
3R 7785174..7785317 132..275 100 <- Minus
3R 7785839..7785953 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:29:20 Download gff for BO15135.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3609664..3609920 1062..1317 99 <- Minus
arm_3R 3609986..3610559 488..1061 100 <- Minus
arm_3R 3610627..3610838 276..487 100 <- Minus
arm_3R 3610896..3611039 132..275 100 <- Minus
arm_3R 3611561..3611675 17..131 100   Minus

BO15135.pep Sequence

Translation from 16 to 1333

> BO15135.pep
MTVTCEIDFDNNPHGTYFGGEVLTGRVTLKLDKMKLVKAITLNITGYAET
RWIERVTTNRRRRRRTFCGREDYIASKTFLVGSNLSSQVSIEAGIHTYNF
VCLIPTECPSSFEGSHGRVRYMATVTLVRPWKFDQSYTRCFTVLKVMDLN
FDSPLLRVPAHSETSKTYCCWPCRSDPLALQLTVPQTGFVPGQNVPLSVL
VTNDSHIPVEQLLISFVMLVTYHSKPPSMPNTTSERLVVNTFKGDAVQRN
CKKLFSYEIRVPATPPTCFNLCGIIQIAYQVEVEARVKGCHNNEVVTIPL
TIGSVPLAQHVPIQPRGFVPQLNVNELAVEEVATAPNSSSPWSVDASIPP
PNYQEAVHMRSTAATRSDDLDDPEPVPPNTLSLDGGAYKPLYPVFDIPSP
SAPPPTDYTQNYMAERAFVNPAMDVDKDKGTWLASFLDH

BO15135.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG18745-PA 433 CG18745-PA 1..433 1..433 2310 100 Plus
CG18746-PA 438 CG18746-PA 2..438 3..433 940 42.4 Plus
CG18748-PC 409 CG18748-PC 1..390 1..397 880 42.4 Plus
CG18747-PB 418 CG18747-PB 1..399 1..401 879 41.9 Plus
CG18748-PB 359 CG18748-PB 1..340 1..397 720 37.3 Plus