Clone BO15136 Report

Search the DGRC for BO15136

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG7142-RA
Protein status:BO15136.pep: validated full length
Sequenced Size:1036

Clone Sequence Records

BO15136.3prime Sequence

774 bp (692 high quality bases) assembled on 2006-05-29

> BO15136.3prime
ATGGTCTAGAAAGCTTGCCATAATGTGGGTGGCCGTGCTGATGACCTGGT
TGATCCACTCCGTGAAGGCGGAGACGCGAACAAAGACCGAGGGCGCGTTC
TTCTGGCCGCATGGCATCTTGCCCCAGGACACAATGCCGATGACAATGTT
GGCCTGCTCGAAGTGCTCCTCGCAGCACTGCTGAATCAATGGTCCGCCGG
AGTCGGCGGTGCAGATGCTAACGCCTCCTGTCAGCGGGCCAGTGCACAGA
TTGGTCTCGTGCAATGGGAGTCCGGAGCGGGCGAGAATCTGTTCGCATAA
CTCCATGTCCAGTATGGGCATGTTGGCCTCCTGCAGGCGGTGCGGATAAT
TGGGTACCGCAGTCATCGAGACATTGCCCCAGCCGTACAAAGTTCCATAT
CCCTCCGGCTGGGCATCCTGCTCCGGCAGCGTTGCTGGCTGGACATAGGT
GTCAAAGACCAGGGGCTCCTTGGTGTAAATTAGCGCGATGTCGTAGGGAT
TCACTCCGCCGAGATAGAGCTCGTGTCGCACGTAGTAGTCGATGTGTCGC
ATTTGAATGTTGCTCGCCTCGCCCTTCTGATCGTGAATATCGTGGCTGCC
CGCCACAATGACCGAGTTCTCCACCGCCTGCGGTGAGCTGAGGCAGTGGG
CCGCCGTCAGGATCCAGTGCTCGTTGATGATGGTGCCGGCACAGTAGTGG
ACCAGTCCCTGATCGGGTGTCATCATCTGGATGCTGACCACATACGGCGC
CCAATGGGGAGTCGCCTCCCGCTT

BO15136.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-PA 1005 CG7142-RA 247..1002 774..19 3755 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-RA 1342 CG7142-RA 484..1239 774..19 3765 99.9 Minus
Phae1-RB 1248 CG16996-RB 838..904 256..190 185 85.1 Minus
Phae1-RA 904 CG16996-RA 636..702 256..190 185 85.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18278284..18279039 19..774 3765 99.9 Plus
2L 23513712 2L 12110254..12110320 256..190 185 85.1 Minus
Blast to na_te.dros performed on 2015-02-12 03:39:57 has no hits.

BO15136.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:26 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-PA 247..1005 15..774 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:49 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-PA 247..1005 15..774 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:41:19 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 492..1251 14..774 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:21 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 484..1243 14..774 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:21 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 18278280..18279039 14..774 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:41:19 Download gff for BO15136.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14104002..14104761 14..774 99   Plus

BO15136.5prime Sequence

827 bp (706 high quality bases) assembled on 2006-06-16

> BO15136.5prime
GAAGTTATCAGTCGACATGCTCTTATCCTACCGATGCATCTACTCGGTGC
TGCTGTCCACCATAGCCAGTATTATGGTGGTACTAAGCTCTGCATCCTCC
GGCTCCATACAGCTGCCCACTGTGCGCAAGTGCGGCGGTGGCAGATCTGC
GGGAGCAGCCCACACAATGGCCATGAATTTGGCGGCCTACGGGCTGCTGG
AGAATCGGATTAGCACTCTGGAAGCACCGCGACAAACGCACTGGACGAAA
AAGTTCCTGGCCAAGCGGGAGGCGACTCCCCATTCGGCGCCGTATGTGGT
CAGCATCCAGATGATGACACCCGATCAGGGACTGGTCCACTACTGTGCCG
GCACCATCATCAACGAGCACTGGATCCTGACGGCGGCCCACTGCCTCAGC
TCACCGCAGGCGGTGGAGAACTCGGTCATTGTGGCGGGCAGCCACGATAT
TCACGATCAGAAGGGCGAGGCGAGCAACATTCAAATGCGACACATCGACT
ACTACGTGCGACACGAGCTCTATCTCGGCGGAGTGAATCCCTACGACATC
GCGCTAATTTACACCAAGGAGCCCCTGGTCTTTGACACCTATGTCCAGCC
AGCAACGCTGCCGGAGCAGGATGCCCAGCCGGAGGGATATGGAACTTTGT
ACGGCTGGGGCAATGTCTCGATGACTGCGGTACCCAATTATCCGCACCGC
CTGCAGGAGGCCAACATGCCCATACTGGACATGGAGTTATGCGAACAGAT
TCTCGCCCGCTCCGGACTCCCATTGCACGAGACCAATCTGTGCACTGGCC
CGCTGACAGGAGGCGTTAGCATCTGCA

BO15136.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-PA 1005 CG7142-RA 1..811 17..827 4055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-RA 1342 CG7142-RA 237..1048 16..827 4060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18278475..18279286 827..16 4060 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:32:25 has no hits.

BO15136.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:27 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-PA 1..810 17..826 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:50 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-PA 1..810 17..826 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:31 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 245..1055 16..826 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:47:27 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 237..1047 16..826 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:47:27 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18278476..18279286 16..826 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:31 Download gff for BO15136.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14104198..14105008 16..826 100   Minus

BO15136.complete Sequence

1036 bp (1036 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633355

> BO15136.complete
GAAGTTATCAGTCGACATGCTCTTATCCTACCGATGCATCTACTCGGTGC
TGCTGTCCACCATAGCCAGTATTATGGTGGTACTAAGCTCTGCATCCTCC
GGCTCCATACAGCTGCCCACTGTGCGCAAGTGCGGCGGTGGCAGATCTGC
GGGAGCAGCCCACACAATGGCCATGAATTTGGCGGCCTACGGGCTGCTGG
AGAATCGGATTAGCACTCTGGAAGCACCGCGACAAACGCACTGGACGAAA
AAGTTCCTGGCCAAGCGGGAGGCGACTCCCCATTCGGCGCCGTATGTGGT
CAGCATCCAGATGATGACACCCGATCAGGGACTGGTCCACTACTGTGCCG
GCACCATCATCAACGAGCACTGGATCCTGACGGCGGCCCACTGCCTCAGC
TCACCGCAGGCGGTGGAGAACTCGGTCATTGTGGCGGGCAGCCACGATAT
TCACGATCAGAAGGGCGAGGCGAGCAACATTCAAATGCGACACATCGACT
ACTACGTGCGACACGAGCTCTATCTCGGCGGAGTGAATCCCTACGACATC
GCGCTAATTTACACCAAGGAGCCCCTGGTCTTTGACACCTATGTCCAGCC
AGCAACGCTGCCGGAGCAGGATGCCCAGCCGGAGGGATATGGAACTTTGT
ACGGCTGGGGCAATGTCTCGATGACTGCGGTACCCAATTATCCGCACCGC
CTGCAGGAGGCCAACATGCCCATACTGGACATGGAGTTATGCGAACAGAT
TCTCGCCCGCTCCGGACTCCCATTGCACGAGACCAATCTGTGCACTGGCC
CGCTGACAGGAGGCGTTAGCATCTGCACCGCCGACTCCGGCGGACCATTG
ATTCAGCAGTGCTGCGAGGAGCACTTCGAGCAGGCCAACATTGTCATCGG
CATTGTGTCCTGGGGCAAGATGCCATGCGGCCAGAAGAACGCGCCCTCGG
TCTTTGTTCGCGTCTCCGCCTTCACGGAGTGGATCAACCAGGTCATCAGC
ACGGCCACCCACATTATGGCAAGCTTTCTAGACCAT

BO15136.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-RA 1005 CG7142-PA 1..1002 17..1018 5010 100 Plus
Phae1-RB 813 CG16996-PB 612..678 781..847 185 85.1 Plus
Phae1-RA 813 CG16996-PA 612..678 781..847 185 85.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-RA 1342 CG7142-RA 237..1239 16..1018 5015 100 Plus
Phae1-RB 1248 CG16996-RB 838..904 781..847 185 85.1 Plus
Phae1-RA 904 CG16996-RA 636..702 781..847 185 85.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18278284..18279286 1018..16 5015 100 Minus
2L 23513712 2L 12110254..12110320 781..847 185 85.1 Plus
Blast to na_te.dros performed on 2014-11-27 15:36:41 has no hits.

BO15136.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:23 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 1..1005 17..1022 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:47 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 245..1251 16..1023 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:28 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 246..1247 17..1020 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:24 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 245..1251 16..1023 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:03 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
CG7142-RA 238..1239 17..1020 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:03 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18278282..18279285 17..1020 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:28 Download gff for BO15136.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14104004..14105007 17..1020 99   Minus

BO15136.pep Sequence

Translation from 16 to 1036

> BO15136.pep
MLLSYRCIYSVLLSTIASIMVVLSSASSGSIQLPTVRKCGGGRSAGAAHT
MAMNLAAYGLLENRISTLEAPRQTHWTKKFLAKREATPHSAPYVVSIQMM
TPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIVAGSHDIHDQKG
EASNIQMRHIDYYVRHELYLGGVNPYDIALIYTKEPLVFDTYVQPATLPE
QDAQPEGYGTLYGWGNVSMTAVPNYPHRLQEANMPILDMELCEQILARSG
LPLHETNLCTGPLTGGVSICTADSGGPLIQQCCEEHFEQANIVIGIVSWG
KMPCGQKNAPSVFVRVSAFTEWINQVISTATHIMASFLDH

BO15136.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7142-PA 334 CG7142-PA 1..334 1..334 1768 100 Plus
Phae1-PB 270 CG16996-PB 42..270 86..328 607 50.4 Plus
Phae1-PA 270 CG16996-PA 42..270 86..328 607 50.4 Plus
Phae2-PC 265 CG16997-PC 36..259 84..323 597 49.4 Plus
Phae2-PB 265 CG16997-PB 36..259 84..323 597 49.4 Plus