Clone BO15137 Report

Search the DGRC for BO15137

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG4367-RA
Protein status:BO15137.pep: validated full length
Sequenced Size:691

Clone Sequence Records

BO15137.3prime Sequence

689 bp (689 high quality bases) assembled on 2006-06-16

> BO15137.3prime
ATGGTCTAGAAAGCTTGCCTTCGATTCCGCCACCTCCACGGGCACCTCCT
GGATAATACTTCTCGCTGAGGATAGTACACTGATATCAGCGCAGTTAATA
AAGGTTTCCTGCGCCCCACAACCCATGGCGCCCGTCCCATCCTCACAAAC
ACCCCAATTATTTCCCGCCGTGTAAGTCCAGCGCAAAACGCAATGAATGC
AGTTGAGATCACTGGGCAGTTTCACGGTTACTGGGATATCGCCAGTGGTG
GTGTTAATGTAGTACTTCTGGCTACCGTCGGTGAAATTCAAAGGATATTG
GTTAAAGCAATCCTCCGACTCGCTGCCATTTTCGTCCAAATCGCAGATGT
GGAAGCGGAAGTAGCCCAGATGATTGGCTGTGATCTTAACATTAATTTCC
GCTTCATCTACTCCGGCAAAGCTCTTTACAATCACTCCACTGCCATATTT
TCCACCCAACTCATTGGGTCGCGGCTGCTCCAAGCTCCAGTCGTCTCCGC
ACAGTCCACATTTGCCATCATTTTCGGTTTGTTTCCAAAATCCACCGCAA
TATAATGCATTGTCATCGTAGTTTGTTGGCGCCGAGTTATCGTAGCGCCA
ACGCGAGGATCTTCCGGTTGGACTTAACATCATACCGTGGCCCTCCAGTT
CACCCATCCGGTTTAAAAAACCCATGTCGACTGATAACT

BO15137.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-PA 660 CG4367-RA 1..657 675..19 3285 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-RB 939 CG4367-RB 32..689 676..19 3290 100 Minus
CG4367-RA 816 CG4367-RA 32..689 676..19 3290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:44:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20304205..20304725 19..539 2590 99.8 Plus
3R 32079331 3R 20304782..20304923 535..676 710 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:44:45 has no hits.

BO15137.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:37 Download gff for BO15137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-PA 1..660 16..675 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:17 Download gff for BO15137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 19..684 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:09 Download gff for BO15137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 19..684 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:09 Download gff for BO15137.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 20304205..20304720 19..534 100 <- Plus
3R 20304782..20304929 535..684 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:17 Download gff for BO15137.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16129927..16130442 19..534 100 <- Plus
arm_3R 16130504..16130651 535..684 97   Plus

BO15137.5prime Sequence

689 bp (671 high quality bases) assembled on 2006-06-16

> BO15137.5prime
GAAGTTATCAGTCGACATGGGTTTTTTAAACCGGATGGGTGAACTGGAGG
GCCACGGTATGATGTTAAGTCCAACCGGAAGATCCTCGCGTTGGCGCTAC
GATAACTCGGCGCCAACAAACTACGATGACAATGCATTATATTGCGGTGG
ATTTTGGAAACAAACCGAAAATGATGGCAAATGTGGACTGTGCGGAGACG
ACTGGAGCTTGGAGCAGCCGCGACCCAATGAGTTGGGTGGAAAATATGGC
AGTGGAGTGATTGTAAAGAGCTTTGCCGGAGTAGATGAAGCGGAAATTAA
TGTTAAGATCACAGCCAATCATCTGGGCTACTTCCGCTTCCACATCTGCG
ATTTGGACGAAAATGGCAGCGAGTCGGAGGATTGCTTTAACCAATATCCT
TTGAATTTCACCGACGGTAGCCAGAAGTACTACATTAACACCACCACTGG
CGATATCCCAGTAACCGTGAAACTGCCCAGTGATCTCAACTGCATTCATT
GCGTTTTGCGCTGGACTTACACGGCGGGAAATAATTGGGGTGTTTGTGAG
GATGGGACGGGCGCCATGGGTTGTGGGGCGCAGGAAACCTTTATTAACTG
CGCTGATATCAGTGTACTATCCTCAGCGAGAAGTATTATCCAGGAGGTGC
CCGTGGAGGTGGCGGAATCGAAGGCAAGCTTTCTAGACC

BO15137.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-PA 660 CG4367-RA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-RB 939 CG4367-RB 32..689 16..673 3290 100 Plus
CG4367-RA 816 CG4367-RA 32..689 16..673 3290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20304205..20304725 673..153 2590 99.8 Minus
3R 32079331 3R 20304782..20304923 157..16 710 100 Minus
Blast to na_te.dros performed on 2015-01-31 10:14:54 has no hits.

BO15137.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:37 Download gff for BO15137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-PA 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:35:40 Download gff for BO15137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 8..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:44:51 Download gff for BO15137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 8..673 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:44:51 Download gff for BO15137.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 20304205..20304720 158..673 100 <- Minus
3R 20304782..20304929 8..157 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:35:40 Download gff for BO15137.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16129927..16130442 158..673 100 <- Minus
arm_3R 16130504..16130651 8..157 97   Minus

BO15137.complete Sequence

691 bp (691 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633356

> BO15137.complete
GAAGTTATCAGTCGACATGGGTTTTTTAAACCGGATGGGTGAACTGGAGG
GCCACGGTATGATGTTAAGTCCAACCGGAAGATCCTCGCGTTGGCGCTAC
GATAACTCGGCGCCAACAAACTACGATGACAATGCATTATATTGCGGTGG
ATTTTGGAAACAAACCGAAAATGATGGCAAATGTGGACTGTGCGGAGACG
ACTGGAGCTTGGAGCAGCCGCGACCCAATGAGTTGGGTGGAAAATATGGC
AGTGGAGTGATTGTAAAGAGCTTTGCCGGAGTAGATGAAGCGGAAATTAA
TGTTAAGATCACAGCCAATCATCTGGGCTACTTCCGCTTCCACATCTGCG
ATTTGGACGAAAATGGCAGCGAGTCGGAGGATTGCTTTAACCAATATCCT
TTGAATTTCACCGACGGTAGCCAGAAGTACTACATTAACACCACCACTGG
CGATATCCCAGTAACCGTGAAACTGCCCAGTGATCTCAACTGCATTCATT
GCGTTTTGCGCTGGACTTACACGGCGGGAAATAATTGGGGTGTTTGTGAG
GATGGGACGGGCGCCATGGGTTGTGGGGCGCAGGAAACCTTTATTAACTG
CGCTGATATCAGTGTACTATCCTCAGCGAGAAGTATTATCCAGGAGGTGC
CCGTGGAGGTGGCGGAATCGAAGGCAAGCTTTCTAGACCAT

BO15137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-RB 660 CG4367-PB 1..657 17..673 3285 100 Plus
CG4367-RA 660 CG4367-PA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-RB 939 CG4367-RB 32..689 16..673 3290 100 Plus
CG4367-RA 816 CG4367-RA 32..689 16..673 3290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20304205..20304725 673..153 2590 99.8 Minus
3R 32079331 3R 20304782..20304923 157..16 710 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:26:58 has no hits.

BO15137.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:59 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:45 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 8..673 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:08 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 33..689 17..675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:00 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 26..689 8..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:41 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4367-RA 33..689 17..675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:41 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20304202..20304720 158..675 99 <- Minus
3R 20304782..20304922 17..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:08 Download gff for BO15137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16129924..16130442 158..675 99 <- Minus
arm_3R 16130504..16130644 17..157 100   Minus

BO15137.pep Sequence

Translation from 16 to 691

> BO15137.pep
MGFLNRMGELEGHGMMLSPTGRSSRWRYDNSAPTNYDDNALYCGGFWKQT
ENDGKCGLCGDDWSLEQPRPNELGGKYGSGVIVKSFAGVDEAEINVKITA
NHLGYFRFHICDLDENGSESEDCFNQYPLNFTDGSQKYYINTTTGDIPVT
VKLPSDLNCIHCVLRWTYTAGNNWGVCEDGTGAMGCGAQETFINCADISV
LSSARSIIQEVPVEVAESKASFLDH

BO15137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4367-PB 219 CG4367-PB 1..219 1..219 1211 100 Plus
CG4367-PA 219 CG4367-PA 1..219 1..219 1211 100 Plus
CG4362-PA 233 CG4362-PA 17..233 9..216 635 53.2 Plus
CG42598-PB 340 CG42598-PB 29..224 12..200 452 42 Plus
CG42749-PB 285 CG15786-PA 29..248 7..223 448 37.2 Plus