Clone BO15138 Report

Search the DGRC for BO15138

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptCG5131-RA
Protein status:BO15138.pep: validated full length
Sequenced Size:883

Clone Sequence Records

BO15138.3prime Sequence

841 bp (728 high quality bases) assembled on 2006-06-16

> BO15138.3prime
ATGGTCTAGAAAGCTTGCATATACATCATAGCCATACATGGGTGCCTCCA
TGTAAGCCTTCTGCTGGTCCGTGGAATTGCGACGGATTCTCCGGCCAATG
GGCTCCAAGTCTGCATAGCATTTGGGAAAGACACGTTCCACAGCAGCGAC
GGCATCTGCTTTGCTAATATTGCGAACAGCGAGCACGGAAGCTAGGGCTT
TGGACTTGACGCAGTTCTGATGCGCTTCCTTGACATTAAATGGCGAGGCA
TCTCCTTGGAACATGGCGCTCAAGAAGGAGCAATGCGCCAGGTTTGCCGC
CCTGATCTCTGTGCAGGCCAGGTGGTCCACGTTGCGGAAGTCCATGTCGT
TATTGCAGTAGTCGAACATGTGAATCATCTCGTGCGTTAGCACTCCATGG
ACCATGCTCTTGTTCCTGGCCATATTCTGGCAGACCACGATCTGGTTGAG
CTTGGGATCGTAACCGCCGGTGACTGTGGGGTCGCACACCTCGCATGAGA
TGTGTCGGCGCAGATCGATGGGACAACCGGAACTTTTCAGTGCTCCCATC
ATCAGTTTGACCAGCGGACCATTTTTGACACACCAGTACACATTCTCCTC
GCACTTGAAACGATCAATGTTCTCCTGCCCCTCCAAGCCGAACAGGACTC
GTGTCCATTTGGGCTTGAAGGTTTCGCCCCTTCGCTCCGGATAAAGGTCG
TAGCCCCAATCCTTTTGAGCAGTGGTGGTTTCTTCGGTGCTCGTCTCCTT
ACTGGCAGATGCTTTTTCAGTCTTTGCATTTTGTTTTTCTTGCGCTGCGC
CGGTGATGGCTTCTATTGCCTCGGGCGCTGTTGCCTCTTTG

BO15138.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-PA 852 CG5131-RA 5..849 863..19 4200 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-RA 1051 CG5131-RA 104..926 841..19 4115 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17484604..17485228 841..217 3125 100 Minus
2L 23513712 2L 17485298..17485499 220..19 1010 100 Minus
Blast to na_te.dros performed on 2015-01-31 10:51:31 has no hits.

BO15138.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:28 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-PA 1..852 15..867 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:52 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-PA 1..852 15..867 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:43:54 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 104..937 10..841 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:51:25 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 104..937 10..841 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:51:25 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 17484604..17485228 217..841 100 -> Minus
2L 17485302..17485510 10..216 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:43:54 Download gff for BO15138.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17484604..17485228 217..841 100 -> Minus
arm_2L 17485302..17485510 10..216 98   Minus

BO15138.5prime Sequence

821 bp (785 high quality bases) assembled on 2006-06-16

> BO15138.5prime
GAAGTTATCAGTCGACATGGAGTTCCTGACTAAAGTGTGGGCCAAAGAGG
CAACAGCGCCCGAGGCAATAGAAGCCATCACCGGCGCAGCGCAAGAAAAA
CAAAATGCAAAGACTGAAAAAGCATCTGCCAGTAAGGAGACGAGCACCGA
AGAAACCACCACTGCTCAAAAGGATTGGGGCTACGACCTTTATCCGGAGC
GAAGGGGCGAAACCTTCAAGCCCAAATGGACACGAGTCCTGTTCGGCTTG
GAGGGGCAGGAGAACATTGATCGTTTCAAGTGCGAGGAGAATGTGTACTG
GTGTGTCAAAAATGGTCCGCTGGTCAAACTGATGATGGGAGCACTGAAAA
GTTCCGGTTGTCCCATCGATCTGCGCCGACACATCTCATGCGAGGTGTGC
GACCCCACAGTCACCGGCGGTTACGATCCCAAGCTCAACCAGATCGTGGT
CTGCCAGAATATGGCCAGGAACAAGAGCATGGTCCATGGAGTGCTAACGC
ACGAGATGATTCACATGTTCGACTACTGCAATAACGACATGGACTTCCGC
AACGTGGACCACCTGGCCTGCACAGAGATCAGGGCGGCAAACCTGGCGCA
TTGCTCCTTCTTGAGCGCCATGTTCCAAGGAGATGCCTCGCCATTTAATG
TCAAGGAAGCGCATCAGAACTGCGTCAAGTCCAAAGCCCTAGCTTCCGTG
CTCGCTGTTCGCAATATTAGCAAAGCAGATGCCGTCGCTGCTGTGGAACG
TGTCTTTTCCAAATGCTATGCAGACTTGGAGCCCATTGGCCGGAGAATCC
GTCGCAATTCCACGGACCAGC

BO15138.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-PA 852 CG5131-RA 1..805 17..821 4000 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-RA 1051 CG5131-RA 78..882 17..821 4010 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17484578..17485228 17..667 3255 100 Plus
2L 23513712 2L 17485298..17485455 664..821 775 99.4 Plus
Blast to na_te.dros performed on 2015-02-02 18:22:22 has no hits.

BO15138.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:39 Download gff for BO15138.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-PA 1..805 17..821 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:42:22 Download gff for BO15138.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 78..882 17..821 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:15:04 Download gff for BO15138.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 78..882 17..821 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:15:04 Download gff for BO15138.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 17484578..17485228 17..667 100 -> Plus
2L 17485302..17485455 668..821 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:42:22 Download gff for BO15138.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17484578..17485228 17..667 100 -> Plus
arm_2L 17485302..17485455 668..821 99   Plus

BO15138.complete Sequence

883 bp (883 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633357

> BO15138.complete
GAAGTTATCAGTCGACATGGAGTTCCTGACTAAAGTGTGGGCCAAAGAGG
CAACAGCGCCCGAGGCAATAGAAGCCATCACCGGCGCAGCGCAAGAAAAA
CAAAATGCAAAGACTGAAAAAGCATCTGCCAGTAAGGAGACGAGCACCGA
AGAAACCACCACTGCTCAAAAGGATTGGGGCTACGACCTTTATCCGGAGC
GAAGGGGCGAAACCTTCAAGCCCAAATGGACACGAGTCCTGTTCGGCTTG
GAGGGGCAGGAGAACATTGATCGTTTCAAGTGCGAGGAGAATGTGTACTG
GTGTGTCAAAAATGGTCCGCTGGTCAAACTGATGATGGGAGCACTGAAAA
GTTCCGGTTGTCCCATCGATCTGCGCCGACACATCTCATGCGAGGTGTGC
GACCCCACAGTCACCGGCGGTTACGATCCCAAGCTCAACCAGATCGTGGT
CTGCCAGAATATGGCCAGGAACAAGAGCATGGTCCATGGAGTGCTAACGC
ACGAGATGATTCACATGTTCGACTACTGCAATAACGACATGGACTTCCGC
AACGTGGACCACCTGGCCTGCACAGAGATCAGGGCGGCAAACCTGGCGCA
TTGCTCCTTCTTGAGCGCCATGTTCCAAGGAGATGCCTCGCCATTTAATG
TCAAGGAAGCGCATCAGAACTGCGTCAAGTCCAAAGCCCTAGCTTCCGTG
CTCGCTGTTCGCAATATTAGCAAAGCAGATGCCGTCGCTGCTGTGGAACG
TGTCTTTCCCAAATGCTATGCAGACTTGGAGCCCATTGGCCGGAGAATCC
GTCGCAATTCCACGGACCAGCAGAAGGCTTACATGGAGGCACCCATGTAT
GGCTATGATGTATATGCAAGCTTTCTAGACCAT

BO15138.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-RA 852 CG5131-PA 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-RA 1051 CG5131-RA 78..926 17..865 4245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17484578..17485228 17..667 3255 100 Plus
2L 23513712 2L 17485298..17485499 664..865 1010 100 Plus
Blast to na_te.dros performed on 2014-11-27 11:05:04 has no hits.

BO15138.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:03 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 1..852 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:19 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 61..920 17..874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:14:11 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 78..926 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:03 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 61..920 17..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:38:26 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
CG5131-RA 78..926 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:38:26 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17484578..17485228 17..667 100 -> Plus
2L 17485302..17485499 668..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:14:11 Download gff for BO15138.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17484578..17485228 17..667 100 -> Plus
arm_2L 17485302..17485499 668..867 99   Plus

BO15138.pep Sequence

Translation from 16 to 883

> BO15138.pep
MEFLTKVWAKEATAPEAIEAITGAAQEKQNAKTEKASASKETSTEETTTA
QKDWGYDLYPERRGETFKPKWTRVLFGLEGQENIDRFKCEENVYWCVKNG
PLVKLMMGALKSSGCPIDLRRHISCEVCDPTVTGGYDPKLNQIVVCQNMA
RNKSMVHGVLTHEMIHMFDYCNNDMDFRNVDHLACTEIRAANLAHCSFLS
AMFQGDASPFNVKEAHQNCVKSKALASVLAVRNISKADAVAAVERVFPKC
YADLEPIGRRIRRNSTDQQKAYMEAPMYGYDVYASFLDH

BO15138.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5131-PA 283 CG5131-PA 1..283 1..283 1509 100 Plus