Clone BO15139 Report

Search the DGRC for BO15139

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptCG2157-RA
Protein status:BO15139.pep: validated full length
Sequenced Size:769

Clone Sequence Records

BO15139.3prime Sequence

767 bp (730 high quality bases) assembled on 2006-06-16

> BO15139.3prime
ATGGTCTAGAAAGCTTGCGTAGACGGTTCCCGAGATTCCGGAACCGTAGT
TATAGCCCGATCCGATGGGCGGCACTCCGCCCAAAGCGCCCAAGCCGCCG
CCCACCACGCTGTTGCCATAGTTGCTCGTATAGTAACTGGATGGATAGCC
ACCAGCGCCGAATCGGGTGTTGTAGTACGGATACCCAGTGCCGGCTCCAG
CGCCCAGCCTGCTGTTGTAGTATGACAGGGCGTATGGATTCGAGTTGTAG
GAGCCACCATAACCACTAAGTCCCGATCCATAGCCACCAAGAGCGGATCC
ATAGCCACCCAAAGCGGATCCATAGCCGCCCAGAGTGGATCCATAGCCTC
CGTATCCGGCCACTGCAGCACCATCTAATCCACCCAGAGCTCGCGAGCTG
TACGGATTGTAGTAGCTGTCCACGCCAACGCCGACGCCACTGCCGTACGC
TCCTCCATAGCCGGCTCCCAGGCCAGAGGCATAGCCGCCGTATCCTGCGC
CATATCCGGCGCCATAGCCGCCGTATCCCGCGCCGTAGCCCGCTCCGTAG
CCACCGTATCCACCAACATAGCGCTTCTCCTGCTTCTTATCCTGCAGCGG
GGCATAGCTGCTGGCGGCGCTCACCTGATCCTCCACGGCCACCGCATCCG
GTGCCGATGCGGATGCCACCTGCTCCAGGTCAGAATCCGCCGCGTCCTGG
GCATAGGCACTCAGCACCAGACTGGTTGCTATCAGGATAAAAAAGCACTT
CATGTCGACTGATAACT

BO15139.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-PA 738 CG2157-RA 1..735 753..19 3675 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-RA 965 CG2157-RA 95..831 755..19 3685 100 Minus
CG2157-RB 1004 CG2157-RB 95..837 755..19 3615 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10869737..10870103 741..375 1835 100 Minus
X 23542271 X 10870181..10870538 376..19 1790 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:57:55 has no hits.

BO15139.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:39 Download gff for BO15139.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-PA 1..738 18..753 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:32:49 Download gff for BO15139.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 91..831 19..761 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:55:31 Download gff for BO15139.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 91..831 19..761 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:55:31 Download gff for BO15139.3prime
Subject Subject Range Query Range Percent Splice Strand
X 10869737..10870103 375..741 100 -> Minus
X 10870183..10870538 19..374 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:32:49 Download gff for BO15139.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10763770..10764136 375..741 100 -> Minus
arm_X 10764216..10764571 19..374 100   Minus

BO15139.5prime Sequence

767 bp (737 high quality bases) assembled on 2006-06-16

> BO15139.5prime
GAAGTTATCAGTCGACATGAAGTGCTTTTTTATCCTGATAGCAACCAGTC
TGGTGCTGAGTGCCTATGCCCAGGACGCGGCGGATTCTGACCTGGAGCAG
GTGGCATCCGCATCGGCACCGGATGCGGTGGCCGTGGAGGATCAGGTGAG
CGCCGCCAGCAGCTATGCCCCGCTGCAGGATAAGAAGCAGGAGAAGCGCT
ATGTTGGTGGATACGGTGGCTACGGAGCGGGCTACGGCGCGGGATACGGC
GGCTATGGCGCCGGATATGGCGCAGGATACGGCGGCTATGCCTCTGGCCT
GGGAGCCGGCTATGGAGGAGCGTACGGCAGTGGCGTCGGCGTTGGCGTGG
ACAGCTACTACAATCCGTACAGCTCGCGAGCTCTGGGTGGATTAGATGGT
GCTGCAGTGGCCGGATACGGAGGCTATGGATCCACTCTGGGCGGCTATGG
ATCCGCTTTGGGTGGCTATGGATCCGCTCTTGGTGGCTATGGATCGGGAC
TTAGTGGTTATGGTGGCTCCTACAACTCGAATCCATACGCCCTGTCATAC
TACAACAGCAGGCTGGGCGCTGGAGCCGGCACTGGGTATCCGTACTACAA
CACCCGATTCGGCGCTGGTGGCTATCCATCCAGTTACTATACGAGCAACT
ATGGCAACAGCGTGGTGGGCGGCGGCTTGGGCGCTTTGGGCGGAGTGCCG
CCCATCGGATCGGGCTATAACTACGGTTCCGGAATCTCGGGAACCGTCTA
CGCAAGCTTTCTAGACC

BO15139.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-PA 738 CG2157-RA 1..735 17..751 3600 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-RA 965 CG2157-RA 95..831 15..751 3685 100 Plus
CG2157-RB 1004 CG2157-RB 95..837 15..751 3615 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10869737..10870103 29..395 1835 100 Plus
X 23542271 X 10870181..10870538 394..751 1790 100 Plus
Blast to na_te.dros performed on 2015-02-12 00:18:27 has no hits.

BO15139.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:29 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-PA 1..738 17..756 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:53 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-PA 1..738 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:58:05 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 91..831 9..751 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:03 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 91..831 9..751 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:03 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10869737..10870103 29..395 100 -> Plus
X 10870183..10870538 396..751 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:58:05 Download gff for BO15139.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10763770..10764136 29..395 100 -> Plus
arm_X 10764216..10764571 396..751 100   Plus

BO15139.complete Sequence

769 bp (769 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633358

> BO15139.complete
GAAGTTATCAGTCGACATGAAGTGCTTTTTTATCCTGATAGCAACCAGTC
TGGTGCTGAGTGCCTATGCCCAGGACGCGGCGGATTCTGACCTGGAGCAG
GTGGCATCCGCATCGGCACCGGATGCGGTGGCCGTGGAGGATCAGGTGAG
CGCCGCCAGCAGCTATGCCCCGCTGCAGGATAAGAAGCAGGAGAAGCGCT
ATGTTGGTGGATACGGTGGCTACGGAGCGGGCTACGGCGCGGGATACGGC
GGCTATGGCGCCGGATATGGCGCAGGATACGGCGGCTATGCCTCTGGCCT
GGGAGCCGGCTATGGAGGAGCGTACGGCAGTGGCGTCGGCGTTGGCGTGG
ACAGCTACTACAATCCGTACAGCTCGCGAGCTCTGGGTGGATTAGATGGT
GCTGCAGTGGCCGGATACGGAGGCTATGGATCCACTCTGGGCGGCTATGG
ATCCGCTTTGGGTGGCTATGGATCCGCTCTTGGTGGCTATGGATCGGGAC
TTAGTGGTTATGGTGGCTCCTACAACTCGAATCCATACGCCCTGTCATAC
TACAACAGCAGGCTGGGCGCTGGAGCCGGCACTGGGTATCCGTACTACAA
CACCCGATTCGGCGCTGGTGGCTATCCATCCAGTTACTATACGAGCAACT
ATGGCAACAGCGTGGTGGGCGGCGGCTTGGGCGCTTTGGGCGGAGTGCCG
CCCATCGGATCGGGCTATAACTACGGTTCCGGAATCTCGGGAACCGTCTA
CGCAAGCTTTCTAGACCAT

BO15139.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-RA 738 CG2157-PA 1..735 17..751 3675 100 Plus
CG2157-RB 744 CG2157-PB 1..741 17..751 3580 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-RA 965 CG2157-RA 95..831 15..751 3685 100 Plus
CG2157-RB 1004 CG2157-RB 95..837 15..751 3590 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10869737..10870103 29..395 1835 100 Plus
X 23542271 X 10870181..10870538 394..751 1790 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:48:19 has no hits.

BO15139.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:05 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 1..738 17..752 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:21 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 69..809 9..751 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:09 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 97..831 17..753 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:05 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 69..809 9..751 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:15 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
CG2157-RA 97..831 17..753 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:15 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
X 10870183..10870538 396..753 99   Plus
X 10869737..10870103 29..395 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:09 Download gff for BO15139.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10763770..10764136 29..395 100 -> Plus
arm_X 10764216..10764571 396..753 99   Plus

BO15139.pep Sequence

Translation from 16 to 769

> BO15139.pep
MKCFFILIATSLVLSAYAQDAADSDLEQVASASAPDAVAVEDQVSAASSY
APLQDKKQEKRYVGGYGGYGAGYGAGYGGYGAGYGAGYGGYASGLGAGYG
GAYGSGVGVGVDSYYNPYSSRALGGLDGAAVAGYGGYGSTLGGYGSALGG
YGSALGGYGSGLSGYGGSYNSNPYALSYYNSRLGAGAGTGYPYYNTRFGA
GGYPSSYYTSNYGNSVVGGGLGALGGVPPIGSGYNYGSGISGTVYASFLD
H

BO15139.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG2157-PA 245 CG2157-PA 1..245 1..245 1306 100 Plus
CG2157-PB 247 CG2157-PB 1..247 1..245 1293 99.2 Plus
CG17108-PA 342 CG17108-PA 139..331 62..247 231 35.3 Plus
Cpr47Ef-PD 601 CG13214-PD 250..414 64..242 219 38 Plus
Cpr47Ef-PC 612 CG13214-PC 250..414 64..242 219 38 Plus
Cpr47Ef-PD 601 CG13214-PD 306..478 64..242 211 35.7 Plus
Cpr47Ef-PD 601 CG13214-PD 262..424 65..242 206 38.7 Plus
CG17108-PA 342 CG17108-PA 17..171 64..242 205 36.3 Plus
CG17108-PA 342 CG17108-PA 211..340 64..191 200 39.6 Plus
CG17108-PA 342 CG17108-PA 46..195 64..243 198 37.2 Plus
CG17108-PA 342 CG17108-PA 68..236 65..242 196 34.8 Plus
CG17108-PA 342 CG17108-PA 79..266 65..241 190 32.8 Plus
Cpr47Ef-PD 601 CG13214-PD 342..532 64..242 190 34.5 Plus
Cpr47Ef-PD 601 CG13214-PD 235..356 70..239 177 39.5 Plus
Cpr47Ef-PD 601 CG13214-PD 429..601 64..236 176 34.6 Plus
CG17108-PA 342 CG17108-PA 233..341 65..170 151 38.8 Plus