Clone Sequence Records
BO15146.3prime Sequence
485 bp (485 high quality bases) assembled on 2006-06-16
> BO15146.3prime
ATGGTCTAGAAAGCTTGCAAATTTACAAAACCGTTTAGGACAATACTCAC
GACAGCAACAATTGATGCCGCATTTGTAATTCATGCCCTCGCATTTCTGC
TTGCCCCACGAAAATGAAAGAAGACGGGCATATCCAGCTGCCTGGCGAGC
TTCATTTTCCTTTATCAGTTCACAATCTGACTTGCATACGAAGTAGAAGG
CTACGCCTTTGCCACAATGTGAGTCCAGGATGCAACGATTCACGGGTTTG
CTGTCGCAGGGACCGGGATTTTGACAACTTGGACCATTGTAGACGCAATG
GGCACCGCAGCAGGCGTTATCCCGAGGTGGAAGTTTGGGCTCCTTATAGC
CATTACCATTGCACTTGTTCAGGCCAATGAACGGATGGCAGGACCCCTGG
TTGCAGCCCGATATTACGGCCATTAGACAAGCCAGCAGTTGGAAAATCAG
CAGAACTCGTATTGCTCTCATGTCGACTGATAACT
BO15146.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-PA | 456 | CG31698-RA | 1..453 | 471..19 | 2265 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-RB | 569 | CG31698-RB | 14..468 | 473..19 | 2275 | 100 | Minus |
| CG31698-RA | 491 | CG31698-RA | 14..468 | 473..19 | 2275 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:39:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3173478..3173827 | 124..473 | 1750 | 100 | Plus |
| 2L | 23513712 | 2L | 3173306..3173412 | 19..125 | 535 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:39:45 has no hits.
BO15146.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:34 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-PA | 1..456 | 15..471 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:59 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-PA | 1..456 | 15..471 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:41:14 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..457 | 15..472 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:04 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 5..471 | 15..482 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:04 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3173299..3173412 | 13..125 | 96 | <- | Plus |
| 2L | 3173480..3173836 | 126..482 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:41:14 Download gff for
BO15146.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3173299..3173412 | 13..125 | 96 | <- | Plus |
| arm_2L | 3173480..3173836 | 126..482 | 98 | | Plus |
BO15146.5prime Sequence
485 bp (485 high quality bases) assembled on 2006-06-16
> BO15146.5prime
GAAGTTATCAGTCGACATGAGAGCAATACGAGTTCTGCTGATTTTCCAAC
TGCTGGCTTGTCTAATGGCCGTAATATCGGGCTGCAACCAGGGGTCCTGC
CATCCGTTCATTGGCCTGAACAAGTGCAATGGTAATGGCTATAAGGAGCC
CAAACTTCCACCTCGGGATAACGCCTGCTGCGGTGCCCATTGCGTCTACA
ATGGTCCAAGTTGTCAAAATCCCGGTCCCTGCGACAGCAAACCCGTGAAT
CGTTGCATCCTGGACTCACATTGTGGCAAAGGCGTAGCCTTCTACTTCGT
ATGCAAGTCAGATTGTGAACTGATAAAGGAAAATGAAGCTCGCCAGGCAG
CTGGATATGCCCGTCTTCTTTCATTTTCGTGGGGCAAGCAGAAATGCGAG
GGCATGAATTACAAATGCGGCATCAATTGTTGCTGTCGTGAGTATTGTCC
TAAACGGTTTTGTAAATTTGCAAGCTTTCTAGACC
BO15146.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-PA | 456 | CG31698-RA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-RB | 569 | CG31698-RB | 14..468 | 15..469 | 2275 | 100 | Plus |
| CG31698-RA | 491 | CG31698-RA | 14..468 | 15..469 | 2275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3173478..3173827 | 364..15 | 1750 | 100 | Minus |
| 2L | 23513712 | 2L | 3173306..3173412 | 469..363 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:32:53 has no hits.
BO15146.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:35 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-PA | 1..456 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:01 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-PA | 1..456 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:10:32 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..457 | 16..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:18:57 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 5..471 | 6..473 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:18:57 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3173303..3173412 | 363..473 | 98 | <- | Minus |
| 2L | 3173480..3173836 | 6..362 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:10:32 Download gff for
BO15146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3173303..3173412 | 363..473 | 98 | <- | Minus |
| arm_2L | 3173480..3173836 | 6..362 | 98 | | Minus |
BO15146.complete Sequence
487 bp (487 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633361
> BO15146.complete
GAAGTTATCAGTCGACATGAGAGCAATACGAGTTCTGCTGATTTTCCAAC
TGCTGGCTTGTCTAATGGCCGTAATATCGGGCTGCAACCAGGGGTCCTGC
CATCCGTTCATTGGCCTGAACAAGTGCAATGGTAATGGCTATAAGGAGCC
CAAACTTCCACCTCGGGATAACGCCTGCTGCGGTGCCCATTGCGTCTACA
ATGGTCCAAGTTGTCAAAATCCCGGTCCCTGCGACAGCAAACCCGTGAAT
CGTTGCATCCTGGACTCACATTGTGGCAAAGGCGTAGCCTTCTACTTCGT
ATGCAAGTCAGATTGTGAACTGATAAAGGAAAATGAAGCTCGCCAGGCAG
CTGGATATGCCCGTCTTCTTTCATTTTCGTGGGGCAAGCAGAAATGCGAG
GGCATGAATTACAAATGCGGCATCAATTGTTGCTGTCGTGAGTATTGTCC
TAAACGGTTTTGTAAATTTGCAAGCTTTCTAGACCAT
BO15146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-RB | 456 | CG31698-PB | 1..453 | 17..469 | 2265 | 100 | Plus |
| CG31698-RA | 456 | CG31698-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:14:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-RB | 569 | CG31698-RB | 14..468 | 15..469 | 2275 | 100 | Plus |
| CG31698-RA | 491 | CG31698-RA | 14..468 | 15..469 | 2275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:14:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3173478..3173827 | 364..15 | 1750 | 100 | Minus |
| 2L | 23513712 | 2L | 3173306..3173412 | 469..363 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:14:17 has no hits.
BO15146.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:08 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..456 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:50:03 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 2..454 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:38 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 2..454 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:08 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..457 | 16..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:13:50 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 16..468 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:13:50 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3173304..3173412 | 363..471 | 98 | <- | Minus |
| 2L | 3173480..3173825 | 17..362 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:38 Download gff for
BO15146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3173304..3173412 | 363..471 | 98 | <- | Minus |
| arm_2L | 3173480..3173825 | 17..362 | 100 | | Minus |
BO15146.pep Sequence
Translation from 16 to 487
> BO15146.pep
MRAIRVLLIFQLLACLMAVISGCNQGSCHPFIGLNKCNGNGYKEPKLPPR
DNACCGAHCVYNGPSCQNPGPCDSKPVNRCILDSHCGKGVAFYFVCKSDC
ELIKENEARQAAGYARLLSFSWGKQKCEGMNYKCGINCCCREYCPKRFCK
FASFLDH
BO15146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-PB | 151 | CG31698-PB | 1..151 | 1..151 | 874 | 100 | Plus |
| CG31698-PA | 151 | CG31698-PA | 1..151 | 1..151 | 874 | 100 | Plus |
