Clone BO15150 Report

Search the DGRC for BO15150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG9989-RA
Protein status:BO15150.pep: validated full length
Sequenced Size:1144

Clone Sequence Records

BO15150.3prime Sequence

760 bp (717 high quality bases) assembled on 2006-05-29

> BO15150.3prime
ATGGTCTAGAAAGCTTGCGCAAACACCAGTTAAGTGTGGAGCGTTTATGG
TAATAAAACGGTACGGATCGCAGCAGACAGTGTGTCCAACGTCCTTCGTA
TTAAGGTTAAGACCCGGATGACAGGGTATCACATGGCAGATCTGGTTTAA
TGCCTGCTGATTGGGTAGACTTACGTCGTTGTAGGTCAGCATTACCCATT
TATCTCCGGAGAGATGGCTAACTATCTTGTACATCCACTCTGGCACGGGA
ATTTTGTTATTATCCAACAGGTAAATTGGTATCATATTGTTATTGGTATT
ATGTCTTAGTCTATGCACTCCCAATGCCCCAATGCAAACCTTAAGGACAT
CGTAAGTACGCGGTATTTGTACATTATTGATGATTGGATTATCATACAGT
CCCCTAACCATATTGTTCACCCAGGTCTCAACGGCCTTCCATTTGCCACG
ATTAACTCCTCGATATTGGGGGATAGCGTTTAGATACCTGAACGTTGACT
TCTTCAGCTCTGTGGATATAAATGCAGAAGCCGGTGTCATGTGGCCACGA
TCAAATTTACACTGCGGCTGTACTGCGCCCAGGTTAGTGAGCAAACAAGC
TTGTGTTGCTCTTCCCTCGTAGGCATTGTCAAATCCACCACTTAATTGAT
CCGACTGCCAAGTGGGATTGGGACGTGGAACGGTGTTTACGTAGCGATAA
GCCTTGTAGATGGAATGTTGNAACGCCAAGCTGTAGCCATCAAAACAATT
GCGAATAAGT

BO15150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-PA 1113 CG9989-RA 375..1110 754..19 3661 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-RA 1214 CG9989-RA 409..1144 754..19 3669 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28671287..28671951 683..19 3325 100 Minus
3R 32079331 3R 28671166..28671236 754..684 344 98.6 Minus
Blast to na_te.dros performed on 2015-02-10 22:55:47 has no hits.

BO15150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:41 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-PA 369..1113 15..760 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:07 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-PA 369..1113 15..760 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:24 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 403..1148 14..760 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:08:40 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 403..1148 14..760 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:08:40 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 28671160..28671236 684..760 96 -> Minus
3R 28671287..28671955 14..683 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:24 Download gff for BO15150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24496882..24496958 684..760 96 -> Minus
arm_3R 24497009..24497677 14..683 99   Minus

BO15150.5prime Sequence

867 bp (789 high quality bases) assembled on 2006-06-16

> BO15150.5prime
GAAGTTATCAGTCGACATGCCCGATCTGAAGTATATGTTGACGATTCTAA
GCCTGTATTTCTTTGTAGGAAGTGTTCAAGCGAATTGCTTAATCGACTTG
GCTCATTTGAATGCCAATTATGTGTACTTAAGCCAAAATAACGGAGTCTA
TGATATTCAGCGCAGTGATATTGTGGAAATCCACCAGACGTTGTATCTGC
TGTGCAATGGAGGACTTCATCGCACCACATTCCTGTGTCGATATGACAGT
GTTTTCAGTCCAGCGCTAAGCTCAGCAGCATGTGCACCACCCGATCCTGT
CGTGGTAAAAGTACCAGATACATCTTGTTCCATTCCGAGTGCTACGTTCG
CCGTAGGATTTTCCTTCAATGGACGCTTTATGGAACTGTATCGCAATTGT
TTTGATGGCTACAGCTTGGCGTTTCAACATTCCATCTACAAGGCTTATCG
CTACGTAAACACCGTTCCACGTCCCAATCCCACTTGGCAGTCGGATCAAT
TAAGTGGTGGATTTGACAATGCCTACGAGGGAAGAGCAACACAAGCTTGT
TTGCTCACTAACCTGGGCGCAGTACAGCCGCAGTGTAAATTTGATCGTGG
CCACATGACACCGGCTTCTGCATTTATATCCACAGAGCTGAAGAAGTCAA
CGTTCAGGTATCTAAACGCTATCCCCCAATATCGAGGAGTTAATCGTGGC
AAATGGAAGGCCGTTGAGACCTGAGTGAACAATATGGTTAGGGGACTGTA
TGATAATCCAATCATCAATAATGTACAAATACCGCGTACTTACGATGTCC
TTAAGGTTTGCATTGGGGCATTGGGAGTGCATAGACTAAGACATAATACC
AATAACAATATGATACC

BO15150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-PA 1113 CG9989-RA 1..851 17..867 4230 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-RA 1214 CG9989-RA 35..885 17..867 4240 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:50:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28671287..28671692 462..867 2015 99.8 Plus
3R 32079331 3R 28670838..28671236 63..461 1995 100 Plus
3R 32079331 3R 28670738..28670783 17..62 230 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:50:32 has no hits.

BO15150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:42 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:08 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:51:13 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 29..885 11..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:14 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 29..885 11..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:14 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28670732..28670783 11..62 94 -> Plus
3R 28670838..28671236 63..461 100 -> Plus
3R 28671287..28671692 462..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:51:13 Download gff for BO15150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24496454..24496505 11..62 94 -> Plus
arm_3R 24496560..24496958 63..461 100 -> Plus
arm_3R 24497009..24497414 462..867 99   Plus

BO15150.complete Sequence

1144 bp (1144 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633364

> BO15150.complete
GAAGTTATCAGTCGACATGCCCGATCTGAAGTATATGTTGACGATTCTAA
GCCTGTATTTCTTTGTAGGAAGTGTTCAAGCGAATTGCTTAATCGACTTG
GCTCATTTGAATGCCAATTATGTGTACTTAAGCCAAAATAACGGAGTCTA
TGATATTCAGCGCAGTGATATTGTGGAAATCCACCAGACGTTGTATCTGC
TGTGCAATGGAGGACTTCATCGCACCACATTCCTGTGTCGATATGACAGT
GTTTTCAGTCCAGCGCTAAGCTCAGCAGCATGTGCACCACCCGATCCTGT
CGTGGTAAAAGTACCAGATACATCTTGTTCCATTCCGAGTGCTACGTTCG
CCGTAGGATTTTCCTTCAATGGACGCTTTATGGAACTGTATCGCAATTGT
TTTGATGGCTACAGCTTGGCGTTTCAACATTCCATCTACAAGGCTTATCG
CTACGTAAACACCGTTCCACGTCCCAATCCCACTTGGCAGTCGGATCAAT
TAAGTGGTGGATTTGACAATGCCTACGAGGGAAGAGCAACACAAGCTTGT
TTGCTCACTAACCTGGGCGCAGTACAGCCGCAGTGTAAATTTGATCGTGG
CCACATGACACCGGCTTCTGCATTTATATCCACAGAGCTGAAGAAGTCAA
CGTTCAGGTATCTAAACGCTATCCCCCAATATCGAGGAGTTAATCGTGGC
AAATGGAAGGCCGTTGAGACCTGGGTGAACAATATGGTTAGGGGACTGTA
TGATAATCCAATCATCAATAATGTACAAATACCGCGTACTTACGATGTCC
TTAAGGTTTGCATTGGGGCATTGGGAGTGCATAGACTAAGACATAATACC
AATAACAATATGATACCAATTTACCTGTTGGATAATAACAAAATTCCCGT
GCCAGAGTGGATGTACAAGATAGTTAGCCATCTCTCCGGAGATAAATGGG
TAATGCTGACCTACAACGACGTAAGTCTACCCAATCAGCAGGCATTAAAC
CAGATCTGCCATGTGATACCCTGTCATCCGGGTCTTAACCTTAATACGAA
GGACGTTGGACACACTGTCTGCTGCGATCCGTACCGTTTTATTACCATAA
ACGCTCCACACTTAACTGGTGTTTGCGCAAGCTTTCTAGACCAT

BO15150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-RA 1113 CG9989-PA 1..1110 17..1126 5550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-RA 1214 CG9989-RA 35..1144 17..1126 5550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28671287..28671951 462..1126 3325 100 Plus
3R 32079331 3R 28670838..28671236 63..461 1995 100 Plus
3R 32079331 3R 28670738..28670783 17..62 230 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:30:36 has no hits.

BO15150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:10 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 1..1113 17..1130 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:30 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 1..1116 15..1131 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:36 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 35..1144 17..1128 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:11 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 1..1116 15..1131 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:42 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9989-RA 35..1144 17..1128 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:42 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28670738..28670783 17..62 100 -> Plus
3R 28670838..28671236 63..461 100 -> Plus
3R 28671287..28671951 462..1128 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:36 Download gff for BO15150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24496460..24496505 17..62 100 -> Plus
arm_3R 24496560..24496958 63..461 100 -> Plus
arm_3R 24497009..24497673 462..1128 99   Plus

BO15150.pep Sequence

Translation from 16 to 1144

> BO15150.pep
MPDLKYMLTILSLYFFVGSVQANCLIDLAHLNANYVYLSQNNGVYDIQRS
DIVEIHQTLYLLCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVP
DTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSIYKAYRYVNTV
PRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQPQCKFDRGHMTPA
SAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPII
NNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMY
KIVSHLSGDKWVMLTYNDVSLPNQQALNQICHVIPCHPGLNLNTKDVGHT
VCCDPYRFITINAPHLTGVCASFLDH

BO15150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG9989-PA 370 CG9989-PA 1..370 1..370 2015 100 Plus
CG33346-PB 364 CG33346-PB 3..357 1..370 489 33.2 Plus
CG12917-PB 356 CG12917-PB 7..354 3..358 335 27.7 Plus
CG14062-PB 346 CG14062-PB 5..344 10..358 304 28 Plus