Clone BO15153 Report

Search the DGRC for BO15153

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG11103-RB
Protein status:BO15153.pep: validated full length
Sequenced Size:550

Clone Sequence Records

BO15153.5prime Sequence

548 bp (548 high quality bases) assembled on 2006-06-16

> BO15153.5prime
GAAGTTATCAGTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCGCAAGCTTTCTAGACC

BO15153.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-PB 519 CG11103-RB 1..516 17..532 2580 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-RB 923 CG11103-RB 196..712 16..532 2585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:32:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13782654..13783170 16..532 2585 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:32:12 has no hits.

BO15153.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:44 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-PB 1..519 17..533 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:11 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-PB 1..519 17..533 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:30 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 8..532 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:46:54 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 8..532 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:46:54 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13782649..13783170 8..532 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:30 Download gff for BO15153.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13676682..13677203 8..532 99   Plus

BO15153.3prime Sequence

548 bp (548 high quality bases) assembled on 2006-06-16

> BO15153.3prime
ATGGTCTAGAAAGCTTGCGACATAGGGATTCCAATTGCTGCCGTCCTCGG
GCAGCAAATTGTTGGTGATCAGGAGGATGACGTCGATGATCCACCAAACG
CCCACGCCGCCCATGGTAAGCAGTTTGCCCACAGCCGTGCCCGTTTGACC
GAGACAGAAGCGATCCATACCGAGGAAACCCAGCAGCATGCTGTAGATCA
GTGTGGTCACAAAGTAGTGATCCGTGTAGCGGACACAGGGCACTCCGGCG
CGCAGAAAGGTGCGATTACCGTAGCACTCGATGTCGGCAAACACGGTGCA
CCAGACCATGGCGTGCTCCACCTCTTCGTACGTGGAACCACCGAACTTCA
GGCATCCGTATTTCTTTTCCTGCTGCGCCGTGGCGTTCTCCCGATGATCG
ACGGGATCCTTGCAATCGAGAAAGTCGCGCGGCAGAAACGAGCACATCAC
ATTCGGTCCCAGTGGATAGAAGGCCGAGTTTCCAGCTCCGCCCGAGGCGG
AAGATGCCGAAGATGACGATGAGGAGGGTCCCATGTCGACTGATAACT

BO15153.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-PB 519 CG11103-RB 1..516 534..19 2580 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-RB 923 CG11103-RB 196..712 535..19 2585 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13782654..13783170 535..19 2585 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:54:55 has no hits.

BO15153.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:42 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-PB 1..519 18..534 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:10 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-PB 1..519 18..534 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:19 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 19..543 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:21:09 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 19..543 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:21:09 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13782649..13783170 19..543 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:19 Download gff for BO15153.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13676682..13677203 19..543 99   Minus

BO15153.complete Sequence

550 bp (550 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633365

> BO15153.complete
GAAGTTATCAGTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCGCAAGCTTTCTAGACCAT

BO15153.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-RB 519 CG11103-PB 1..516 17..532 2580 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-RB 923 CG11103-RB 196..712 16..532 2585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13782654..13783170 16..532 2585 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:40:42 has no hits.

BO15153.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:12 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 1..519 17..533 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:31 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 137..658 8..532 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:56 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 197..712 17..534 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:12 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 137..658 8..532 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:49 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 197..712 17..534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:49 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
X 13782655..13783170 17..534 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:56 Download gff for BO15153.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13676688..13677203 17..534 99   Plus

BO15153.pep Sequence

Translation from 16 to 550

> BO15153.pep
MGPSSSSSSASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHREN
ATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVFADIECYGNRTFLRAGVPC
VRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWII
DVILLITNNLLPEDGSNWNPYVASFLDH

BO15153.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-PB 172 CG11103-PB 1..172 1..172 939 100 Plus
amx-PB 284 CG12127-PB 195..281 79..166 184 45.5 Plus
amx-PA 284 CG12127-PA 195..281 79..166 184 45.5 Plus
CG10795-PA 178 CG10795-PA 34..150 41..166 173 35.9 Plus