Clone Sequence Records
BO15153.5prime Sequence
548 bp (548 high quality bases) assembled on 2006-06-16
> BO15153.5prime
GAAGTTATCAGTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCGCAAGCTTTCTAGACC
BO15153.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 519 | CG11103-RB | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:32:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..712 | 16..532 | 2585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:32:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783170 | 16..532 | 2585 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:32:12 has no hits.
BO15153.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:44 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..533 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:11 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 17..533 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:30 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..712 | 8..532 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:46:54 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..712 | 8..532 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:46:54 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782649..13783170 | 8..532 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:30 Download gff for
BO15153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676682..13677203 | 8..532 | 99 | | Plus |
BO15153.3prime Sequence
548 bp (548 high quality bases) assembled on 2006-06-16
> BO15153.3prime
ATGGTCTAGAAAGCTTGCGACATAGGGATTCCAATTGCTGCCGTCCTCGG
GCAGCAAATTGTTGGTGATCAGGAGGATGACGTCGATGATCCACCAAACG
CCCACGCCGCCCATGGTAAGCAGTTTGCCCACAGCCGTGCCCGTTTGACC
GAGACAGAAGCGATCCATACCGAGGAAACCCAGCAGCATGCTGTAGATCA
GTGTGGTCACAAAGTAGTGATCCGTGTAGCGGACACAGGGCACTCCGGCG
CGCAGAAAGGTGCGATTACCGTAGCACTCGATGTCGGCAAACACGGTGCA
CCAGACCATGGCGTGCTCCACCTCTTCGTACGTGGAACCACCGAACTTCA
GGCATCCGTATTTCTTTTCCTGCTGCGCCGTGGCGTTCTCCCGATGATCG
ACGGGATCCTTGCAATCGAGAAAGTCGCGCGGCAGAAACGAGCACATCAC
ATTCGGTCCCAGTGGATAGAAGGCCGAGTTTCCAGCTCCGCCCGAGGCGG
AAGATGCCGAAGATGACGATGAGGAGGGTCCCATGTCGACTGATAACT
BO15153.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 519 | CG11103-RB | 1..516 | 534..19 | 2580 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:54:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..712 | 535..19 | 2585 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783170 | 535..19 | 2585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:54:55 has no hits.
BO15153.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:42 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 18..534 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:10 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-PB | 1..519 | 18..534 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:19 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..712 | 19..543 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:21:09 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 191..712 | 19..543 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:21:09 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782649..13783170 | 19..543 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:19 Download gff for
BO15153.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676682..13677203 | 19..543 | 99 | | Minus |
BO15153.complete Sequence
550 bp (550 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633365
> BO15153.complete
GAAGTTATCAGTCGACATGGGACCCTCCTCATCGTCATCTTCGGCATCTT
CCGCCTCGGGCGGAGCTGGAAACTCGGCCTTCTATCCACTGGGACCGAAT
GTGATGTGCTCGTTTCTGCCGCGCGACTTTCTCGATTGCAAGGATCCCGT
CGATCATCGGGAGAACGCCACGGCGCAGCAGGAAAAGAAATACGGATGCC
TGAAGTTCGGTGGTTCCACGTACGAAGAGGTGGAGCACGCCATGGTCTGG
TGCACCGTGTTTGCCGACATCGAGTGCTACGGTAATCGCACCTTTCTGCG
CGCCGGAGTGCCCTGTGTCCGCTACACGGATCACTACTTTGTGACCACAC
TGATCTACAGCATGCTGCTGGGTTTCCTCGGTATGGATCGCTTCTGTCTC
GGTCAAACGGGCACGGCTGTGGGCAAACTGCTTACCATGGGCGGCGTGGG
CGTTTGGTGGATCATCGACGTCATCCTCCTGATCACCAACAATTTGCTGC
CCGAGGACGGCAGCAATTGGAATCCCTATGTCGCAAGCTTTCTAGACCAT
BO15153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:40:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 519 | CG11103-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-RB | 923 | CG11103-RB | 196..712 | 16..532 | 2585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13782654..13783170 | 16..532 | 2585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:40:42 has no hits.
BO15153.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:12 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 1..519 | 17..533 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:31 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 137..658 | 8..532 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:56 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 197..712 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:12 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 137..658 | 8..532 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:49 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11103-RB | 197..712 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:49 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13782655..13783170 | 17..534 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:56 Download gff for
BO15153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13676688..13677203 | 17..534 | 99 | | Plus |
BO15153.pep Sequence
Translation from 16 to 550
> BO15153.pep
MGPSSSSSSASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHREN
ATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVFADIECYGNRTFLRAGVPC
VRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWII
DVILLITNNLLPEDGSNWNPYVASFLDH
BO15153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11103-PB | 172 | CG11103-PB | 1..172 | 1..172 | 939 | 100 | Plus |
amx-PB | 284 | CG12127-PB | 195..281 | 79..166 | 184 | 45.5 | Plus |
amx-PA | 284 | CG12127-PA | 195..281 | 79..166 | 184 | 45.5 | Plus |
CG10795-PA | 178 | CG10795-PA | 34..150 | 41..166 | 173 | 35.9 | Plus |