Clone Sequence Records
BO15154.3prime Sequence
338 bp (338 high quality bases) assembled on 2006-06-16
> BO15154.3prime
ATGGTCTAGAAAGCTTGCGTTGGTTGGTGCCATTGCAGAACATTCATCTG
GAACTTCAGACCGGCACATTTTCAAATTGGGATCAAAGTACTGGTTCACT
TTGCAGCTCTTAATCAACGACAAAACTGATCCATTGACCACGTAACAATA
AACGTAGGTTCTACAAGTTGGATCAGCCTGGTTTTCCATTATGGTGGTGG
TTGTAACTTCGCTGCAGGCTTCTTCCGCACTCCAAGTCTTCGAGTTGTGG
TCGTCAAACTCTGGAGCTGGCAAAGCCGTGAGGCAATGAGCCAGCAACAG
TAAAAACATTATACGCAGCCACATGTCGACTGATAACT
BO15154.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-PA | 309 | CG32284-RA | 1..306 | 324..19 | 1530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:58:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-RA | 457 | CG32284-RA | 7..313 | 325..19 | 1535 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3186759..3186899 | 298..158 | 705 | 100 | Minus |
3L | 28110227 | 3L | 3186963..3187101 | 157..19 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:58:53 has no hits.
BO15154.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:45 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-PA | 1..309 | 15..324 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:13 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-PA | 1..309 | 15..324 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:00:43 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 15..327 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:31:14 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 15..327 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:31:14 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3186670..3186697 | 298..325 | 100 | -> | Minus |
3L | 3186760..3186899 | 158..297 | 100 | -> | Minus |
3L | 3186963..3187104 | 15..157 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:00:43 Download gff for
BO15154.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3186670..3186697 | 298..325 | 100 | -> | Minus |
arm_3L | 3186760..3186899 | 158..297 | 100 | -> | Minus |
arm_3L | 3186963..3187104 | 15..157 | 98 | | Minus |
BO15154.5prime Sequence
338 bp (338 high quality bases) assembled on 2006-06-16
> BO15154.5prime
GAAGTTATCAGTCGACATGTGGCTGCGTATAATGTTTTTACTGTTGCTGG
CTCATTGCCTCACGGCTTTGCCAGCTCCAGAGTTTGACGACCACAACTCG
AAGACTTGGAGTGCGGAAGAAGCCTGCAGCGAAGTTACAACCACCACCAT
AATGGAAAACCAGGCTGATCCAACTTGTAGAACCTACGTTTATTGTTACG
TGGTCAATGGATCAGTTTTGTCGTTGATTAAGAGCTGCAAAGTGAACCAG
TACTTTGATCCCAATTTGAAAATGTGCCGGTCTGAAGTTCCAGATGAATG
TTCTGCAATGGCACCAACCAACGCAAGCTTTCTAGACC
BO15154.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-PA | 309 | CG32284-RA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-RA | 457 | CG32284-RA | 7..313 | 16..322 | 1535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3186759..3186899 | 43..183 | 705 | 100 | Plus |
3L | 28110227 | 3L | 3186963..3187101 | 184..322 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:53:44 has no hits.
BO15154.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:46 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-PA | 1..309 | 17..326 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:14 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-PA | 1..309 | 17..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:32:16 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 14..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:03:38 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 14..326 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:03:38 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3186670..3186697 | 16..43 | 100 | -> | Plus |
3L | 3186760..3186899 | 44..183 | 100 | -> | Plus |
3L | 3186963..3187104 | 184..326 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:32:16 Download gff for
BO15154.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3186670..3186697 | 16..43 | 100 | -> | Plus |
arm_3L | 3186760..3186899 | 44..183 | 100 | -> | Plus |
arm_3L | 3186963..3187104 | 184..326 | 98 | | Plus |
BO15154.complete Sequence
340 bp (340 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633366
> BO15154.complete
GAAGTTATCAGTCGACATGTGGCTGCGTATAATGTTTTTACTGTTGCTGG
CTCATTGCCTCACGGCTTTGCCAGCTCCAGAGTTTGACGACCACAACTCG
AAGACTTGGAGTGCGGAAGAAGCCTGCAGCGAAGTTACAACCACCACCAT
AATGGAAAACCAGGCTGATCCAACTTGTAGAACCTACGTTTATTGTTACG
TGGTCAATGGATCAGTTTTGTCGTTGATTAAGAGCTGCAAAGTGAACCAG
TACTTTGATCCCAATTTGAAAATGTGCCGGTCTGAAGTTCCAGATGAATG
TTCTGCAATGGCACCAACCAACGCAAGCTTTCTAGACCAT
BO15154.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-RA | 309 | CG32284-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-RA | 457 | CG32284-RA | 7..313 | 16..322 | 1535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3186759..3186899 | 43..183 | 705 | 100 | Plus |
3L | 28110227 | 3L | 3186963..3187101 | 184..322 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:57:32 has no hits.
BO15154.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:13 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..309 | 17..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:33 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 14..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:40 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 8..313 | 17..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:13 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 1..316 | 14..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:45 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32284-RA | 8..313 | 17..324 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:45 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3186671..3186697 | 17..43 | 100 | -> | Plus |
3L | 3186760..3186899 | 44..183 | 100 | -> | Plus |
3L | 3186963..3187101 | 184..324 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:40 Download gff for
BO15154.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3186671..3186697 | 17..43 | 100 | -> | Plus |
arm_3L | 3186760..3186899 | 44..183 | 100 | -> | Plus |
arm_3L | 3186963..3187101 | 184..324 | 98 | | Plus |
BO15154.pep Sequence
Translation from 16 to 340
> BO15154.pep
MWLRIMFLLLLAHCLTALPAPEFDDHNSKTWSAEEACSEVTTTTIMENQA
DPTCRTYVYCYVVNGSVLSLIKSCKVNQYFDPNLKMCRSEVPDECSAMAP
TNASFLDH
BO15154.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32284-PA | 102 | CG32284-PA | 1..102 | 1..102 | 555 | 100 | Plus |
CG14957-PA | 96 | CG14957-PA | 1..95 | 1..95 | 254 | 50.5 | Plus |
CG42494-PC | 283 | CG42494-PC | 215..283 | 28..96 | 232 | 55.1 | Plus |
CG42494-PB | 283 | CG42494-PB | 215..283 | 28..96 | 232 | 55.1 | Plus |
CG42494-PA | 283 | CG42494-PA | 215..283 | 28..96 | 232 | 55.1 | Plus |
CG42494-PC | 283 | CG42494-PC | 123..197 | 31..104 | 165 | 40 | Plus |
CG42494-PB | 283 | CG42494-PB | 123..197 | 31..104 | 165 | 40 | Plus |