Clone Sequence Records
BO15155.5prime Sequence
772 bp (707 high quality bases) assembled on 2006-06-16
> BO15155.5prime
GAAGTTATCAGTCGACATGGCGAACGTTAATTTGCAGATGCCGCTGATTG
CAGCAGCCACCACCATACTGACAATTGTCAGTGGGGCCACCGCCAGCACC
ACATCCTCGACAGAGACGGCCAAGAACCAGCCATTGTATCACAATATGGG
GTCTTTGTTCGAGAATCGATGGCTGCCAATGGATCAGCCGATGCAGCATC
ATCCCAATCATCGGTATGGCTCGTCCAAAATTCCACGGGCAAATGCGGGT
GAAAGGAGGGCCTTTAGCAGCGGCCATTCCTCAGGCTCCCGGCAAGGATT
GGCCCATATGCTCAACGGACTAACAAATCTCTCGGGCCTGGGACACATTT
CCAATGGGTATGGCTCGGTGGCGCCCACCCATACGGAGGCACTGGCCCTG
GGCTCCACCAAACAGGAGATACCGATTTACGAGGACCACAATGAAGATGC
CACCGCGGTGGCTGCCGTTGCAGCAGCTGGAGCCCATGATTTTGGCTCGG
GAAATGAACAATCTGGCGGTGGATTGGAGAACAATCAAGAACATTCGCCG
ATTTACAATTATCCCGGTGCCGCACATAATGGTGGATTTTTGCCAGCCTA
CGGTTCAGCTGGATCTGGTCACGAGCAGGACTACGCACAGTGGTCATCAT
CGGCGCCGGAGGAGCAGCAGCCGGAACAGCAGGCGGCTCATCCCTATGCG
TACGATAAATTTTCAATGGGAAATTTCCTGCCGCCGTACATGCAGGACTC
TGGATACCATGACCAGCAGGGG
BO15155.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7031-PA | 1428 | CG7031-RA | 1..756 | 17..772 | 3730 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7031-RB | 2597 | CG7031-RB | 66..821 | 17..772 | 3750 | 99.7 | Plus |
CG7031-RA | 1796 | CG7031-RA | 66..821 | 17..772 | 3750 | 99.7 | Plus |
CG7031-RC | 2594 | CG7031-RC | 66..818 | 17..772 | 3695 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22804776..22805514 | 34..772 | 3665 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:18:23 has no hits.
BO15155.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:47 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-PA | 1..756 | 17..772 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:15 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-PA | 1..756 | 17..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:29:20 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..821 | 17..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:12:30 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..821 | 17..772 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:12:30 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22804356..22804373 | 17..34 | 100 | -> | Plus |
3R | 22804777..22805514 | 35..772 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:29:20 Download gff for
BO15155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18630078..18630095 | 17..34 | 100 | -> | Plus |
arm_3R | 18630499..18631236 | 35..772 | 99 | | Plus |
BO15155.complete Sequence
1459 bp (1459 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633367
> BO15155.complete
GAAGTTATCAGTCGACATGGCGAACGTTAATTTGCAGATGCCGCTGATTG
CAGCAGCCACCACCATACTGACAATTGTCAGTGGGGCCACCGCCAGCACC
ACATCCTCGACAGAGACGGCCAAGAACCAGCCATTGTATCACAATATGGG
GTCTTTGTTCGAGAATCGATGGCTGCCAATGGATCAGCCGATGCAGCATC
ATCCCAATCATCGGTATGGCTCGTCCAAAATTCCACGGGCAAATGCGGGT
GAAAGGAGGGCCTTTAGCAGCGGCCATTCCTCAGGCTCCCGGCAAGGATT
GGCCCATATGCTCAACGGACTAACAAATCTCTCGGGCCTGGGACACATTT
CCAATGGGTATGGCTCGGTGGCGCCCACCCATACGGAGGCACTGGCCCTG
GGCTCCACCAAACAGGAGATACCGATTTACGAGGACCACAATGAAGATGC
CACCGCGGTGGCTGCCGTTGCAGCAGCTGGAGCCCATGATTTTGGCTCGG
GAAATGAACAATCTGGCGGTGGATTGGAGAACAATCAAGAACATTCGCCG
ATTTACAATTATCCCGGTGCCGCACATAATGGTGGATTTTTGCCAGCCTA
CGGTTCAGCTGGATCTGGTCACGAGCAGGACTACGCACAGTGGTCATCAT
CGGCGCCGGAGGAGCAGCAGCCGGAACAGCAGGCGGCTCATCCCTATGCG
TACGATAAAATTTCAATGGGAAATTTCCTGCCGCCGTACATGCAGGACTC
TGGATACGATGACCAGCAGGGGCAGCTTTACCACCAGCAGTTGCAACACC
AACAACAGCAGCAACAGCAACAGCATCTGCAGCAGCTGCAGCAGCAACAG
CAGCAACTGTACCACCAACAGCAGCAGCAGCAGCAGCAGCGCCAGGAACA
GGAACAGCACTCTTCGTATTTCGGCCACCATGAACCATCCATTTCTGGAT
CCGCTGCATCATCGGCTTCATCTGCCTCGAGCGGATCTGGTGCTGATGAC
TTTGAGGAGCATCCCGATGCTGGGCAGGAGCAGAGCTCCAACTACTTGTC
GGAGGCAAGTGGTCATGGCCAGGGACACACCCATCACTCGCATCATGTGG
ATATCATTAACTATGTGCCGGTGAAGCATGTGAAGAAGCAGCACGTGCCG
GTGGAGAAGGAGGTGAAGATACCCATATCGCATGCGGTCATCATACCGGT
TCGCAAGCCAGTGCCCATTCACATACCGATCACCAAGAATGTTCACGTGC
CGGTGGAGAAGGAATTAAAGGTTCCAGTGGAGCGACTGATTCCTGTGCCC
GTGGAGAAACACATCCCAGTACCGGTGGAGAAGCATGTGCCCTATCATGT
GGTCAAATATGTGCCCATCAAGGTGCCCAAGCCGTTTCCCGTGAAGGTGC
CCGTCTTCAAGACAGTGCTGCACAAGGTCAAGAGCTGGTGGGCAAGCTTT
CTAGACCAT
BO15155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:30:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7031-RB | 1428 | CG7031-PB | 1..1425 | 17..1441 | 7125 | 100 | Plus |
CG7031-RA | 1428 | CG7031-PA | 1..1425 | 17..1441 | 7125 | 100 | Plus |
CG7031-RC | 1425 | CG7031-PC | 1..1422 | 17..1441 | 7045 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:30:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7031-RB | 2597 | CG7031-RB | 66..1490 | 17..1441 | 7125 | 100 | Plus |
CG7031-RA | 1796 | CG7031-RA | 66..1490 | 17..1441 | 7125 | 100 | Plus |
CG7031-RC | 2594 | CG7031-RC | 66..1487 | 17..1441 | 7045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:30:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22804776..22806183 | 34..1441 | 7040 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:30:01 has no hits.
BO15155.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:54 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 1..1428 | 17..1442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:07 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..1490 | 17..1441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:16 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..1490 | 17..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:54 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..1490 | 17..1441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:21 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7031-RA | 66..1490 | 17..1443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:21 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22804356..22804373 | 17..34 | 100 | -> | Plus |
3R | 22804777..22806183 | 35..1443 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:16 Download gff for
BO15155.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18630078..18630095 | 17..34 | 100 | -> | Plus |
arm_3R | 18630499..18631905 | 35..1443 | 99 | | Plus |
BO15155.pep Sequence
Translation from 16 to 1459
> BO15155.pep
MANVNLQMPLIAAATTILTIVSGATASTTSSTETAKNQPLYHNMGSLFEN
RWLPMDQPMQHHPNHRYGSSKIPRANAGERRAFSSGHSSGSRQGLAHMLN
GLTNLSGLGHISNGYGSVAPTHTEALALGSTKQEIPIYEDHNEDATAVAA
VAAAGAHDFGSGNEQSGGGLENNQEHSPIYNYPGAAHNGGFLPAYGSAGS
GHEQDYAQWSSSAPEEQQPEQQAAHPYAYDKISMGNFLPPYMQDSGYDDQ
QGQLYHQQLQHQQQQQQQQHLQQLQQQQQQLYHQQQQQQQQRQEQEQHSS
YFGHHEPSISGSAASSASSASSGSGADDFEEHPDAGQEQSSNYLSEASGH
GQGHTHHSHHVDIINYVPVKHVKKQHVPVEKEVKIPISHAVIIPVRKPVP
IHIPITKNVHVPVEKELKVPVERLIPVPVEKHIPVPVEKHVPYHVVKYVP
IKVPKPFPVKVPVFKTVLHKVKSWWASFLDH
BO15155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7031-PB | 475 | CG7031-PB | 1..475 | 1..475 | 2535 | 100 | Plus |
CG7031-PA | 475 | CG7031-PA | 1..475 | 1..475 | 2535 | 100 | Plus |
CG7031-PC | 474 | CG7031-PC | 1..474 | 1..475 | 2518 | 99.8 | Plus |
CG13840-PC | 466 | CG13840-PC | 29..447 | 54..470 | 336 | 27.5 | Plus |
CG33299-PC | 172 | CG33299-PC | 15..172 | 318..474 | 252 | 34.4 | Plus |