Clone BO15157 Report

Search the DGRC for BO15157

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG3604-RA
Protein status:BO15157.pep: validated full length
Sequenced Size:430

Clone Sequence Records

BO15157.3prime Sequence

428 bp (428 high quality bases) assembled on 2006-06-16

> BO15157.3prime
ATGGTCTAGAAAGCTTGCAGACGAGGTGCTAGTTTCTGTGGCCACTTCGC
TGTTTTGTTCGGTTGTTGAGTCCGTGGAGGAAACCGCAGACTTTACCAAA
CATGCCTGTTCGCACTGCTCCTTGGATTCGAAGTTGTTCTTGTTGCCGGC
ACATCCACCGTAAACGAACTCCTCGCAGGATTGTGTATCCACGTTGTAGG
CGTAGCGATAGAACAGAGCGAAACAGCGACCGGTTTCCTTGGGCTGATGA
CAGTCCTCCGGAACAGTGAGCTCACTGGCATCAGGCAGGGGTTTGGCCAC
CGCGGGCTCCTCCGCCTTCTCCACGACGACATCCGAGGGAGCTGCACGAA
TTCCGGCTGCCAGGAGCAGAACAGCCGCGAATACTATGAAACTGAAGCTA
TATCTAAAGCACATGTCGACTGATAACT

BO15157.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-PA 399 CG3604-RA 1..396 414..19 1980 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-RB 631 CG3604-RB 97..497 419..19 1990 99.8 Minus
CG3604-RA 571 CG3604-RA 37..437 419..19 1990 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3697376..3697776 19..419 1990 99.8 Plus
Blast to na_te.dros performed on 2015-01-30 17:56:07 has no hits.

BO15157.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:41 Download gff for BO15157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-PA 1..399 15..414 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:52:07 Download gff for BO15157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 15..419 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:06:35 Download gff for BO15157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 15..419 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:06:35 Download gff for BO15157.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 3697378..3697776 21..419 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:52:07 Download gff for BO15157.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3697378..3697776 21..419 99   Plus

BO15157.5prime Sequence

428 bp (428 high quality bases) assembled on 2006-06-16

> BO15157.5prime
GAAGTTATCAGTCGACATGTGCTTTAGATATAGCTTCAGTTTCATAGTAT
TCGCGGCTGTTCTGCTCCTGGCAGCCGGAATTCGTGCAGCTCCCTCGGAT
GTCGTCGTGGAGAAGGCGGAGGAGCCCGCGGTGGCCAAACCCCTGCCTGA
TGCCAGTGAGCTCACTGTTCCGGAGGACTGTCATCAGCCCAAGGAAACCG
GTCGCTGTTTCGCTCTGTTCTATCGCTACGCCTACAACGTGGATACACAA
TCCTGCGAGGAGTTCGTTTACGGTGGATGTGCCGGCAACAAGAACAACTT
CGAATCCAAGGAGCAGTGCGAACAGGCATGTTTGGTAAAGTCTGCGGTTT
CCTCCACGGACTCAACAACCGAACAAAACAGCGAAGTGGCCACAGAAACT
AGCACCTCGTCTGCAAGCTTTCTAGACC

BO15157.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-PA 399 CG3604-RA 1..396 17..412 1980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-RB 631 CG3604-RB 97..497 12..412 1990 99.8 Plus
CG3604-RA 571 CG3604-RA 37..437 12..412 1990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3697376..3697776 412..12 1990 99.8 Minus
Blast to na_te.dros performed on 2015-02-12 05:14:33 has no hits.

BO15157.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:48 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-PA 1..399 17..416 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:17 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-PA 1..399 17..416 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:55:09 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 12..416 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:36:40 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 12..416 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:36:40 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3697378..3697776 12..410 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:55:09 Download gff for BO15157.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3697378..3697776 12..410 99   Minus

BO15157.complete Sequence

430 bp (430 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633368

> BO15157.complete
GAAGTTATCAGTCGACATGTGCTTTAGATATAGCTTCAGTTTCATAGTAT
TCGCGGCTGTTCTGCTCCTGGCAGCCGGAATTCGTGCAGCTCCCTCGGAT
GTCGTCGTGGAGAAGGCGGAGGAGCCCGCGGTGGCCAAACCCCTGCCTGA
TGCCAGTGAGCTCACTGTTCCGGAGGACTGTCATCAGCCCAAGGAAACCG
GTCGCTGTTTCGCTCTGTTCTATCGCTACGCCTACAACGTGGATACACAA
TCCTGCGAGGAGTTCGTTTACGGTGGATGTGCCGGCAACAAGAACAACTT
CGAATCCAAGGAGCAGTGCGAACAGGCATGTTTGGTAAAGTCTGCGGTTT
CCTCCACGGACTCAACAACCGAACAAAACAGCGAAGTGGCCACAGAAACT
AGCACCTCGTCTGCAAGCTTTCTAGACCAT

BO15157.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:47:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-RB 399 CG3604-PB 1..396 17..412 1980 100 Plus
CG3604-RA 399 CG3604-PA 1..396 17..412 1980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:47:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-RB 631 CG3604-RB 97..497 12..412 1990 99.8 Plus
CG3604-RA 571 CG3604-RA 37..437 12..412 1990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3697376..3697776 412..12 1990 99.8 Minus
Blast to na_te.dros performed on 2014-11-27 16:47:10 has no hits.

BO15157.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:10 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 1..399 17..416 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:46 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 97..500 12..416 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:15 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 42..437 17..414 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:11 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 2..405 12..416 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:53 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 42..437 17..414 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:26:53 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3697374..3697771 17..414 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:15 Download gff for BO15157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3697374..3697771 17..414 99   Minus

BO15157.pep Sequence

Translation from 16 to 430

> BO15157.pep
MCFRYSFSFIVFAAVLLLAAGIRAAPSDVVVEKAEEPAVAKPLPDASELT
VPEDCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESKEQ
CEQACLVKSAVSSTDSTTEQNSEVATETSTSSASFLDH

BO15157.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:20:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-PB 132 CG3604-PB 1..132 1..132 685 100 Plus
CG3604-PA 132 CG3604-PA 1..132 1..132 685 100 Plus
CG10031-PA 129 CG10031-PA 56..128 36..108 155 39.7 Plus
CG2816-PB 84 CG2816-PB 31..81 55..105 152 51 Plus
CG13748-PA 113 CG13748-PA 8..110 9..105 146 35 Plus