Clone BO15161 Report

Search the DGRC for BO15161

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG31472-RA
Protein status:BO15161.pep: validated full length
Sequenced Size:772

Clone Sequence Records

BO15161.3prime Sequence

770 bp (732 high quality bases) assembled on 2006-06-16

> BO15161.3prime
ATGGTCTAGAAAGCTTGCAGGAGCCAGCCGTTCGTACACCCAACCATCCT
CTCCTTTGTGAACCAGTTTGCTGTCGACTTCGGATTCTACTCCTCCACCT
CGTCTAAAGCGGATGCGATCGTGGAGCCGATCGGTCTGACCCTGCCAGAA
CTCAATGAGGTCGGGACGCACCAAGTAGCCACCCCAGTTGGGCAGCGGCA
CCTCGCCATCGGGACCCAGTTCTAGCTTAATTGCCGCCTCCACGTCGTCC
AAGTAGCTGCGCGACGGAATCCGCTGGCTCTGCGGACTGGCAGCGGCTCC
GATTTGGCTGGCTCTTGGTCGCTGGTGGAAGTACTTGAGGGAGTCTTCCA
CCGAGATCTTCTCAGCCACGCCCTCGATGCGGACACTTCGCCGCAAAGGG
AGCCAGTAGAAGGATATGGCTACATAGGGATTGGACTTGATGTCCTCAGC
CTTGCGGCTACCGTAGTTCGTGAAGAAGGTGAATCCCTCGGCGGTGGCTT
CTTTAACCAGCACATAGCGATTGGAAGGCCTACCCTCCGCACTCACGGTA
GCCAGGGCGGCGGCATTGGGCTCCAAGATCTCCGGGGTTTTCAGCGCCAA
CTCCAGCCAGTCTCGGAATACACAGAAGGGATTCTTCACCTTGATGTTAT
CCTCCAGGAAGGCGTCCTTGCGCTCACAGTACTTCAGACGAAGTGCCGAA
AGTGGCACCTCCGAGGCACCTTGGCTCATCCTTCGAATTGTTTGCAGCAA
CTTCATGTCGACTGATAACT

BO15161.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31472-PA 741 CG31472-RA 1..738 756..19 3690 100 Minus
CG31472-PB 714 CG31472-RB 1..711 729..19 3555 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
sgll-RA 1253 CG31472-RA 137..874 756..19 3690 100 Minus
sgll-RB 1314 CG31472-RB 199..935 755..19 3685 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:29:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7810856..7811533 696..19 3390 100 Minus
3R 32079331 3R 7810730..7810789 755..696 300 100 Minus
Blast to na_te.dros performed on 2015-02-06 10:29:11 has no hits.

BO15161.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:42 Download gff for BO15161.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31472-PA 1..741 18..756 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:42:05 Download gff for BO15161.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 106..848 13..756 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:26:46 Download gff for BO15161.3prime
Subject Subject Range Query Range Percent Splice Strand
sgll-RA 137..879 13..756 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:26:46 Download gff for BO15161.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 7810726..7810789 696..758 98 -> Minus
3R 7810857..7811538 13..695 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:42:05 Download gff for BO15161.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3636448..3636511 696..758 98 -> Minus
arm_3R 3636579..3637260 13..695 99   Minus

BO15161.5prime Sequence

712 bp (711 high quality bases) assembled on 2006-06-16

> BO15161.5prime
GAAGTTATCAGTCGACATGAAGTTGCTGCAAACAATTCGAAGGATGAGCC
AAGGTGCCTCGGAGGTGCCACTTTCGGCACTTCGTCTGAAGTACTGTGAG
CGCAAGGACGCCTTCCTGGAGGATAACATCAAGGTGAAGAATCCCTTCTG
TGTATTCCGAGACTGGCTGGAGTTGGCGCTGAAAACCCCGGAGATCTTGG
AGCCCAATGCCGCCGCCCTGGCTACCGTGAGTGCGGAGGGTAGGCCTTCC
AATCGCTATGTGCTGGTTAAAGAAGCCACCGCCGAGGGATTCACCTTCTT
CACGAACTACGGTAGCCGCAAGGCTGAGGACATCAAGTCCAATCCCTATG
TAGCCATATCCTTCTACTGGCTCCCTTTGCGGCGAAGTGTCCGCATCGAG
GGCGTGGCTGAGAAGATCTCGGTGGAAGACTCCCTCAAGTACTTCCACCA
GCGACCAAGAGCCAGCCAAATCGGAGCCGCTGCCAGTCCGCAGAGCCAGC
GGATTCCGTCGCGCAGCTACTTGGACGACGTGGAGGCGGCAATTAAGCTA
GAACTGGGTCCCGATGGCGAGGTGCCGCTGCCCAACTGGGGTGGCTACTT
GGTGCGTCCCGACCTCATTGAGTTCTGGCAGGGTCAGACCGATCGGCTCC
ACGATCGCATCCGCTTTAGACGAGGTGGAGGAGTAGAATCCGAAGTCGAC
AGCAAACTGGTT

BO15161.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31472-PA 741 CG31472-RA 1..687 17..703 3435 100 Plus
CG31472-PB 714 CG31472-RB 1..660 44..703 3300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
sgll-RA 1253 CG31472-RA 137..832 17..712 3480 100 Plus
sgll-RB 1314 CG31472-RB 199..893 18..712 3475 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7810856..7811491 77..712 3180 100 Plus
3R 32079331 3R 7810730..7810789 18..77 300 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:14:19 has no hits.

BO15161.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:54 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31472-PA 1..687 17..703 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:24 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31472-PA 1..687 17..703 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:44:51 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 106..801 17..712 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:07:48 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
sgll-RA 137..832 17..712 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:07:48 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7810726..7810789 15..77 98 -> Plus
3R 7810857..7811491 78..712 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:44:51 Download gff for BO15161.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3636448..3636511 15..77 98 -> Plus
arm_3R 3636579..3637213 78..712 100   Plus

BO15161.complete Sequence

772 bp (772 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633370

> BO15161.complete
GAAGTTATCAGTCGACATGAAGTTGCTGCAAACAATTCGAAGGATGAGCC
AAGGTGCCTCGGAGGTGCCACTTTCGGCACTTCGTCTGAAGTACTGTGAG
CGCAAGGACGCCTTCCTGGAGGATAACATCAAGGTGAAGAATCCCTTCTG
TGTATTCCGAGACTGGCTGGAGTTGGCGCTGAAAACCCCGGAGATCTTGG
AGCCCAATGCCGCCGCCCTGGCTACCGTGAGTGCGGAGGGTAGGCCTTCC
AATCGCTATGTGCTGGTTAAAGAAGCCACCGCCGAGGGATTCACCTTCTT
CACGAACTACGGTAGCCGCAAGGCTGAGGACATCAAGTCCAATCCCTATG
TAGCCATATCCTTCTACTGGCTCCCTTTGCGGCGAAGTGTCCGCATCGAG
GGCGTGGCTGAGAAGATCTCGGTGGAAGACTCCCTCAAGTACTTCCACCA
GCGACCAAGAGCCAGCCAAATCGGAGCCGCTGCCAGTCCGCAGAGCCAGC
GGATTCCGTCGCGCAGCTACTTGGACGACGTGGAGGCGGCAATTAAGCTA
GAACTGGGTCCCGATGGCGAGGTGCCGCTGCCCAACTGGGGTGGCTACTT
GGTGCGTCCCGACCTCATTGAGTTCTGGCAGGGTCAGACCGATCGGCTCC
ACGATCGCATCCGCTTTAGACGAGGTGGAGGAGTAGAATCCGAAGTCGAC
AGCAAACTGGTTCACAAAGGAGAGGATGGTTGGGTGTACGAACGGCTGGC
TCCTGCAAGCTTTCTAGACCAT

BO15161.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
sgll-RA 741 CG31472-PA 1..738 17..754 3690 100 Plus
sgll-RB 714 CG31472-PB 1..711 44..754 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
sgll-RA 1253 CG31472-RA 137..874 17..754 3690 100 Plus
sgll-RB 1314 CG31472-RB 199..935 18..754 3685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7810856..7811533 77..754 3390 100 Plus
3R 32079331 3R 7810730..7810789 18..77 300 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:33:54 has no hits.

BO15161.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:55 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 1..741 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:09 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 106..848 17..760 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:01 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 106..843 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:55 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
CG31472-RA 106..848 17..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:56 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
sgll-RA 137..874 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:56 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7810728..7810789 17..77 98 -> Plus
3R 7810857..7811533 78..756 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:01 Download gff for BO15161.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3636450..3636511 17..77 98 -> Plus
arm_3R 3636579..3637255 78..756 99   Plus

BO15161.pep Sequence

Translation from 16 to 772

> BO15161.pep
MKLLQTIRRMSQGASEVPLSALRLKYCERKDAFLEDNIKVKNPFCVFRDW
LELALKTPEILEPNAAALATVSAEGRPSNRYVLVKEATAEGFTFFTNYGS
RKAEDIKSNPYVAISFYWLPLRRSVRIEGVAEKISVEDSLKYFHQRPRAS
QIGAAASPQSQRIPSRSYLDDVEAAIKLELGPDGEVPLPNWGGYLVRPDL
IEFWQGQTDRLHDRIRFRRGGGVESEVDSKLVHKGEDGWVYERLAPASFL
DH

BO15161.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
sgll-PA 246 CG31472-PA 1..246 1..246 1279 100 Plus
sgll-PB 237 CG31472-PB 1..237 10..246 1237 100 Plus
CG31473-PA 257 CG31473-PA 39..252 35..242 289 33.6 Plus