Clone BO15163 Report

Search the DGRC for BO15163

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG31694-RA
Protein status:BO15163.pep: validated full length
Sequenced Size:1309

Clone Sequence Records

BO15163.3prime Sequence

786 bp (716 high quality bases) assembled on 2006-05-29

> BO15163.3prime
ATGGTCTAGAAAGCTTGCAGTGACGACGGCCGATCGCTTGTCACGATTCT
TTCCACGTGTTATGGAGCGTGCCTTGAATGCAGCAGCATTCACAAGGTGC
CGCTCCAGCTTGGTCGGCTTGACCTTGGCGTTTCCATTGATGCCTGTGTT
CGTGGGTCGTGGTCCCAGCTGGAAGATGTCACGGATGAACTCGTTCTCCT
GCAGCTGCGAGGTCATCCCGGGACCCATGACAGTGCACATGGCCGAATAC
TGATGATGGATGGACCAGGAATCTAGTGTCAGCGACTCGGTACCGAAACG
AATGCTAATCTCTGGGGAAATGTCCTCCTCCAGGTATCGCAGCACATCAC
GGAAGGTGGCACGCTGGGCCTTGCGATCGCGCTTGGCGCGGTACTTATGC
GAATCCGTGGCCAGCTGCTTGACGGCCTCCGATAACTCAGCGATGTCATC
TTCTAGGAAATCCTCTTCGTGAGCACGTCCCGACTCCAGAATTAAAGCAA
TGGTCTCGCCAGCGGCCATGCGGACGTCCAAATGTGTAGATTGCAAGAGA
CCCAAGAACTTCTTAATAGATGGAAACATGTTTTGGCCAGTGGTCATCAA
CGAAACAAAATCCCCCGAAGGTATAAGTGTTAGTAGAAGCCCCCAGGCGT
TCAAGGCCTCCGCATGGAAAGTCCCAGCTTCGGCGGTGACGGATACCGGT
GTCTTGTCATCGCCACGCAAATAACTGCCTGCAAAGATGGCCTCGAAGCT
CTGCATCAGGTGTACCCACTCCCCAACATCCTCGCA

BO15163.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-PA 1278 CG31694-RA 508..1275 786..19 3790 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-RA 2639 CG31694-RA 1325..2092 786..19 3810 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2870688..2870932 327..571 1225 100 Plus
2L 23513712 2L 2869323..2869552 100..329 1150 100 Plus
2L 23513712 2L 2871004..2871218 572..786 1045 99.1 Plus
2L 23513712 2L 2869174..2869255 19..100 410 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:48:57 has no hits.

BO15163.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:55 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-PA 509..1278 15..785 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:25 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-PA 509..1278 15..785 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:07:28 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 1326..2099 12..785 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:48:51 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 1326..2099 12..785 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:48:51 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2869167..2869254 12..99 96 <- Plus
2L 2869323..2869550 100..327 100 <- Plus
2L 2870689..2870932 328..571 100 <- Plus
2L 2871004..2871217 572..785 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:07:28 Download gff for BO15163.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2869167..2869254 12..99 96 <- Plus
arm_2L 2869323..2869550 100..327 100 <- Plus
arm_2L 2870689..2870932 328..571 100 <- Plus
arm_2L 2871004..2871217 572..785 99   Plus

BO15163.5prime Sequence

838 bp (728 high quality bases) assembled on 2006-06-16

> BO15163.5prime
GAAGTTATCAGTCGACATGCCGCGACGCAACAAGAAATCAGCAGCAGGCA
GAGGCCGCACCAATGACTCCAATTCTGAGGACGAGTCCTTTGACAATGTG
AGCGTTTACTCTCATATGTCCGAAGTCGCATCCTCGGAGGCCACCGACGA
GCTGGCCAATGAGCGTTTCGAGGAGAAGTTCGAGAAGGCCCTGGAACAGG
CCACCGAGAAGTCGGCCCAGACACGTGTGCAGGCTCTGCAAGCGATTTGC
GAACTGCTCATGCACCGCTACATGCCGGACTTCGTGGAGGACCGCAAGAT
GACCCTGATGGATTTCGTGGAGAAGAGCATCCGTCGAGGCAAGGGCCAGG
AGCAGGTGTGGGGCGCACGACTCGCGCCCCTGCTGGTGCTCCAAATGGGC
GGGGATGAAGGCATATCCAAGGCGATGAATCAATTCCTGTTGAACACCGT
TCAGGACAAGTCCGTGGGCTTCGATGCCCGTGCCAAGTGCTGCACAGCTG
TGGGATTGTTGAGCTTCCTGGGCTGCGAGGATGTTGGGGAGTTGGTACAC
CTGATGCAGAGCTTCGAGGCCATCTTCGCAGGCAGTTATTTGCGTGGCGA
TGACAAGACACCGGTATCCGTCACCGCCGAAGCTGGGACTTTCCATGCGG
AGGCCTTGAACGCCTGGGGGCTTCTACTAACACTTATACCTTCGGGGGAT
TTTGTTTCGTTGATGACCACTGGCCAAAACATGTTTCCATCTATTAAGAA
GTTCTTGGGTCTCTTGCAATCTACACATTTGGGACGTCCGCATGGGCGCT
GGCGAGACCATTGCTTTAATTCTGGGAGCCGGACGTGC

BO15163.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-PA 1278 CG31694-RA 1..766 17..782 3830 100 Plus
CG31694-PA 1278 CG31694-RA 765..808 782..825 195 97.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 10:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-RA 2639 CG31694-RA 816..1638 15..838 4020 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 10:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2871004..2871690 738..52 3435 100 Minus
2L 23513712 2L 2870834..2870932 838..739 375 94 Minus
2L 23513712 2L 2873635..2873674 54..15 200 100 Minus
Blast to na_te.dros performed on 2015-02-09 10:57:46 has no hits.

BO15163.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:56 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-PA 1..821 17..838 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:27 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-PA 1..821 17..838 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:39:34 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 811..1638 9..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:41:01 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 811..1638 9..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:41:01 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2870834..2870932 739..838 95 <- Minus
2L 2871004..2871688 54..738 100 <- Minus
2L 2873636..2873679 9..53 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:39:34 Download gff for BO15163.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2870834..2870932 739..838 95 <- Minus
arm_2L 2871004..2871688 54..738 100 <- Minus
arm_2L 2873636..2873679 9..53 95   Minus

BO15163.complete Sequence

1309 bp (1309 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633371

> BO15163.complete
GAAGTTATCAGTCGACATGCCGCGACGCAACAAGAAATCAGCAGCAGGCA
GAGGCCGCACCAATGACTCCAATTCTGAGGACGAGTCCTTTGACAATGTG
AGCGTTTACTCTCATATGTCCGAAGTCGCATCCTCGGAGGCCACCGACGA
GCTGGCCAATGAGCGTTTCGAGGAGAAGTTCGAGAAGGCCCTGGAACAGG
CCACCGAGAAGTCGGCCCAGACACGTGTGCAGGCTCTGCAAGCGATTTGC
GAACTGCTCATGCACCGCTACATGCCGGACTTCGTGGAGGACCGCAAGAT
GACCCTGATGGATTTCGTGGAGAAGAGCATCCGTCGAGGCAAGGGCCAGG
AGCAGGTGTGGGGCGCACGACTCGCGCCCCTGCTGGTGCTCCAAATGGGC
GGGGATGAAGGCATATCCAAGGCGATGAATCAATTCCTGTTGAACACCGT
TCAGGACAAGTCCGTGGGCTTCGATGCCCGTGCCAAGTGCTGCACAGCTG
TGGGATTGTTGAGCTTCCTGGGCTGCGAGGATGTTGGGGAGTTGGTACAC
CTGATGCAGAGCTTCGAGGCCATCTTCGCAGGCAGTTATTTGCGTGGCGA
TGACAAGACACCGGTATCCGTCACCGCCGAAGCTGGGACTTTCCATGCGG
AGGCCTTGAACGCCTGGGGGCTTCTACTAACACTTATACCTTCGGGGGAT
TTTGTTTCGTTGATGACCACTGGCCAAAACATGTTTCCATCTATTAAGAA
GTTCTTGGGTCTCTTGCAATCTACACATTTGGACGTCCGCATGGCCGCTG
GCGAGACCATTGCTTTAATTCTGGAGTCGGGACGTGCTCACGAAGAGGAT
TTCCTAGAAGATGACATCGCTGAGTTATCGGAGGCCGTCAAGCAGCTGGC
CACGGATTCGCATAAGTACCGCGCCAAGCGCGATCGCAAGGCCCAGCGTG
CCACCTTCCGTGATGTGCTGCGATACCTGGAGGAGGACATTTCCCCAGAG
ATTAGCATTCGTTTCGGTACCGAGTCGCTGACACTAGATTCCTGGTCCAT
CCATCATCAGTATTCGGCCATGTGCACTGTCATGGGTCCCGGGATGACCT
CGCAGCTGCAGGAGAACGAGTTCATCCGTGACATCTTCCAGCTGGGACCA
CGACCCACGAACACAGGCATCAATGGAAACGCCAAGGTCAAGCCGACCAA
GCTGGAGCGGCACCTTGTGAATGCTGCTGCATTCAAGGCACGCTCCATAA
CACGTGGAAAGAATCGTGACAAGCGATCGGCCGTCGTCACTGCAAGCTTT
CTAGACCAT

BO15163.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-RA 1278 CG31694-PA 1..1275 17..1291 6375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-RA 2639 CG31694-RA 816..2092 15..1291 6385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2871004..2871690 738..52 3435 100 Minus
2L 23513712 2L 2870688..2870932 983..739 1225 100 Minus
2L 23513712 2L 2869323..2869552 1210..981 1150 100 Minus
2L 23513712 2L 2869174..2869255 1291..1210 410 100 Minus
2L 23513712 2L 2873635..2873674 54..15 200 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:55:24 has no hits.

BO15163.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:56 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 1..1278 17..1295 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:11 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 840..2128 9..1298 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:41 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 818..2092 17..1293 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:57 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 840..2128 9..1298 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:52 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
CG31694-RA 818..2092 17..1293 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:52 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2869172..2869254 1211..1293 97 <- Minus
2L 2869323..2869550 983..1210 100 <- Minus
2L 2870689..2870932 739..982 100 <- Minus
2L 2871004..2871688 54..738 100 <- Minus
2L 2873636..2873672 17..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:41 Download gff for BO15163.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2869172..2869254 1211..1293 97 <- Minus
arm_2L 2869323..2869550 983..1210 100 <- Minus
arm_2L 2870689..2870932 739..982 100 <- Minus
arm_2L 2871004..2871688 54..738 100 <- Minus
arm_2L 2873636..2873672 17..53 100   Minus

BO15163.pep Sequence

Translation from 16 to 1309

> BO15163.pep
MPRRNKKSAAGRGRTNDSNSEDESFDNVSVYSHMSEVASSEATDELANER
FEEKFEKALEQATEKSAQTRVQALQAICELLMHRYMPDFVEDRKMTLMDF
VEKSIRRGKGQEQVWGARLAPLLVLQMGGDEGISKAMNQFLLNTVQDKSV
GFDARAKCCTAVGLLSFLGCEDVGELVHLMQSFEAIFAGSYLRGDDKTPV
SVTAEAGTFHAEALNAWGLLLTLIPSGDFVSLMTTGQNMFPSIKKFLGLL
QSTHLDVRMAAGETIALILESGRAHEEDFLEDDIAELSEAVKQLATDSHK
YRAKRDRKAQRATFRDVLRYLEEDISPEISIRFGTESLTLDSWSIHHQYS
AMCTVMGPGMTSQLQENEFIRDIFQLGPRPTNTGINGNAKVKPTKLERHL
VNAAAFKARSITRGKNRDKRSAVVTASFLDH

BO15163.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31694-PA 425 CG31694-PA 1..425 1..425 2160 100 Plus