Clone Sequence Records
BO15164.3prime Sequence
731 bp (703 high quality bases) assembled on 2006-05-29
> BO15164.3prime
ATGGTCTAGAAAGCTTGCCTGAATAATGTTATCCTTCTTCAGCTTGGCCA
GCTCATCCGGCCCGTAACCCAGTAGTTCGCCCAGCACTTCATCCGTGTGC
TGGCCAAGAATCGGAGGAGCTGTCCGGGCATCGTTTCGCGCTTCGCTGAA
GGTCACAGGAGGACCAACCACCTTGACTGTTTCGTCCTTGGGATGCCGCA
GGCTTTTCACCAGGCCAATGGCTTTTATATGCTCGTCCTCGAAGACCTCG
GGAATGGAGTTAACAGGTCCCACGGGAAAGGAGGCGCCCTCGAAAAGTTT
CATCCAGTTGCGCGAGGTGTCCTCGGATAGCATTTGCTCTAGGATTCCCA
GCAGCTCCACTCGATTGGTCACACGATCCTTGTTGGTCTTGAATTTGGGA
TTCTGCGCCAAATGTTCCACTTTTAGGCGGCGACACAGGTCCACAAACTG
AACATCACTGCCAGTGCCCAGGGTGAGATAGCCGTCCTTCGTCTTGAAGC
TCTGATACGGAACGATGCTGGAGTGTGCGGTGCCCATCCTTCCTGCTTCG
ACCCCGGAATTCAGGTAGTTGCTACCCACGTTGAGCAGCAGGGAGCAGCA
GGTGGACAACAGGTCGACTTCGATCTTCTGGCCACGTTGCGTGCGGGTCC
TTTGATAGAGGGCTGCCAAAATTGCTCCATGGGCGTACAGTCCTGTGGAC
ATATCCGTCACAGCCACGCCCACCTTGCTGG
BO15164.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 1326 | CG10877-RA | 611..1323 | 731..19 | 3565 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:20:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 709..1421 | 731..19 | 3565 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20562647..20563359 | 19..731 | 3565 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 11:20:51 has no hits.
BO15164.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:57 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 611..1326 | 15..731 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:28 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 611..1326 | 15..731 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:50:57 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 709..1424 | 15..731 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:33:15 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 709..1424 | 15..731 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:33:15 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562644..20563359 | 15..731 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:50:57 Download gff for
BO15164.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388366..16389081 | 15..731 | 99 | | Plus |
BO15164.5prime Sequence
786 bp (685 high quality bases) assembled on 2006-06-16
> BO15164.5prime
GAAGTTATCAGTCGACATGTTGTCACAGAATTTACGCCTCGTCCGGGGAT
TGCTTAATTACGGAGTTTGCCGCCCGAGCTTGAGAAACTTCGCAGCCGTT
GGCGATAAAAACAACGCAGCCGATAATGCTAATGCCAGCGATGTGGACGA
ACGCCACCCGCTGCATGGTATCCGGATTTTGGACCTATCGCGCATCATCG
CCGGCCCCTATTGCACCATGGTTCTGGCGGATCTCGGCGCGGAAGTTATC
AAGGTGGAGCGTCCACACTTTGGCGATGAGGCGCGTAAGTGGGGACCACC
CTTTCTAAAGAACAGCAACGATGCCGCCTACTTCCTGGCTCCCAATCGCA
ATAAACGGAGCATCTGCATCGATATCAAGCGCGGCACGCAACTCCTTCAT
CGCCTGGCCGAGATTAGCGACGTGCTGGTGGAGAATTATGTGCCCGGCAC
CTTGGAGCGTTACGGCCTGGGCTACGAGCAGTTGCGTAAGGTGAATCCCA
AACTGATCTATTGCTCAATGACGGGTTATGGCTCTGTGGGACCGTATGCC
AAGCGACCCGGCTACGATGTGATTGCCTCCTCGGTTGGAGGACTGATGCA
CATCACCGGCGAGCGGGATGGACCGCCCAGCAAGGTGGGCGTGGCTGTGA
CGGATATGTCCACAGGACTGTACGCCCATGGAGCAATTTTGGCAGCCCTC
TATCAAAGGACCCGCACGCCACGTGGCCAGAAGATCGAAGTCGACCTGTT
GTCCACCTGCTGCTCCCTGCTGCTCAACGTGGGGTA
BO15164.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 1326 | CG10877-RA | 1..767 | 17..783 | 3810 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..865 | 16..783 | 3825 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:37:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20563203..20563970 | 783..16 | 3825 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:37:01 has no hits.
BO15164.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:58 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 1..768 | 17..785 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:30 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-PA | 1..768 | 17..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:02:13 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..866 | 16..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:12:18 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..866 | 16..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:12:18 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20563202..20563970 | 16..785 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:02:13 Download gff for
BO15164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388924..16389692 | 16..785 | 99 | | Minus |
BO15164.complete Sequence
1357 bp (1357 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633372
> BO15164.complete
GAAGTTATCAGTCGACATGTTGTCACAGAATTTACGCCTCGTCCGGGGAT
TGCTTAATTACGGAGTTTGCCGCCCGAGCTTGAGAAACTTCGCAGCCGTT
GGCGATAAAAACAACGCAGCCGATAATGCTAATGCCAGCGATGTGGACGA
ACGCCACCCGCTGCATGGTATCCGGATTTTGGACCTATCGCGCATCATCG
CCGGCCCCTATTGCACCATGGTTCTGGCGGATCTCGGCGCGGAAGTTATC
AAGGTGGAGCGTCCACACTTTGGCGATGAGGCGCGTAAGTGGGGACCACC
CTTTCTAAAGAACAGCAACGATGCCGCCTACTTCCTGGCTCCCAATCGCA
ATAAACGGAGCATCTGCATCGATATCAAGCGCGGCACGCAACTCCTTCAT
CGCCTGGCCGAGATTAGCGACGTGCTGGTGGAGAATTATGTGCCCGGCAC
CTTGGAGCGTTACGGCCTGGGCTACGAGCAGTTGCGTAAGGTGAATCCCA
AACTGATCTATTGCTCAATGACGGGTTATGGCTCTGTGGGACCGTATGCC
AAGCGACCCGGCTACGATGTGATTGCCTCCTCGGTTGGAGGACTGATGCA
CATCACCGGCGAGCGGGATGGACCGCCCAGCAAGGTGGGCGTGGCTGTGA
CGGATATGTCCACAGGACTGTACGCCCATGGAGCAATTTTGGCAGCCCTC
TATCAAAGGACCCGCACGCAACGTGGCCAGAAGATCGAAGTCGACCTGTT
GTCCACCTGCTGCTCCCTGCTGCTCAACGTGGGTAGCAACTACCTGAATT
CCGGGGTCGAAGCAGGAAGGATGGGCACCGCACACTCCAGCATCGTTCCG
TATCAGAGCTTCAAGACGAAGGACGGCTATCTCACCCTGGGCACTGGCAG
TGATGTTCAGTTTGTGGACCTGTGTCGCCGCCTAAAAGTGGAACATTTGG
CGCAGAATCCCAAATTCAAGACCAACAAGGATCGTGTGACCAATCGAGTG
GAGCTGCTGGGAATCCTAGAGCAAATGCTATCCGAGGACACCTCGCGCAA
CTGGATGAAACTTTTCGAGGGCGCCTCCTTTCCCGTGGGACCTGTTAACT
CCATTCCCGAGGTCTTCGAGGACGAGCATATAAAAGCCATTGGCCTGGTG
AAAAGCCTGCGGCATCCCAAGGACGAAACAGTCAAGGTGGTTGGTCCTCC
TGTGACCTTCAGCGAAGCGCGAAACGATGCCCGGACAGCTCCTCCGATTC
TTGGCCAGCACACGGATGAAGTGCTGGGCGAACTACTGGGTTACGGGCCG
GATGAGCTGGCCAAGCTGAAGAAGGATAACATTATTCAGGCAAGCTTTCT
AGACCAT
BO15164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:46:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1326 | CG10877-PA | 1..1323 | 17..1339 | 6615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..1421 | 16..1339 | 6620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20562647..20563970 | 1339..16 | 6620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:46:29 has no hits.
BO15164.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:58 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 1..1326 | 17..1343 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:13 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1424 | 16..1343 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:23 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1421 | 22..1341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:58 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1424 | 16..1343 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:35 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 104..1421 | 22..1341 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:26:35 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562645..20563964 | 22..1341 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:23 Download gff for
BO15164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388367..16389686 | 22..1341 | 99 | | Minus |
BO15164.pep Sequence
Translation from 16 to 1357
> BO15164.pep
MLSQNLRLVRGLLNYGVCRPSLRNFAAVGDKNNAADNANASDVDERHPLH
GIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNS
NDAAYFLAPNRNKRSICIDIKRGTQLLHRLAEISDVLVENYVPGTLERYG
LGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGER
DGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQRGQKIEVDLLSTCCS
LLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDGYLTLGTGSDVQFV
DLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWMKLF
EGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSE
ARNDARTAPPILGQHTDEVLGELLGYGPDELAKLKKDNIIQASFLDH
BO15164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-PA | 441 | CG10877-PA | 1..441 | 1..441 | 2294 | 100 | Plus |
| CG9319-PB | 373 | CG9319-PB | 2..305 | 48..371 | 297 | 27.8 | Plus |
| CG9319-PA | 373 | CG9319-PA | 2..305 | 48..371 | 297 | 27.8 | Plus |
