Clone BO15167 Report

Search the DGRC for BO15167

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG5347-RA
Protein status:BO15167.pep: validated full length
Sequenced Size:889

Clone Sequence Records

BO15167.3prime Sequence

864 bp (701 high quality bases) assembled on 2006-06-16

> BO15167.3prime
ATGGTCTAGAAAGCTTGCGTCTGAATTGACGGCATTTGATTGTGTCTGGT
TATCGTCACAACGACGATGGTGCCTGTAGAAGCACTTGTTTCCAAAGGGA
CATTTGCCCAAGCCCCCATTGAAGTACTTGCAATCCTTGGCGCCCATTGC
CGCGCGATATTCGCTTAGCAACTTGTCCTTCTCCTCCTTTGTATCCACCC
AGTAGGCACTAGGGCACACGAATTCCGAAAAGACGCGACATTCGGGGCAA
CCACGCGTCACAGTGGCCTCAAATTGATGGGCCTGACGCCATGTGCGAAT
GCACGTCAAACAGAATATGTGCTTGCACTTGGACAAGATGCCAAAGCGAC
GTTCACGTCCCTTCTTCTCCACGACGGTATCGAAACAAATGCCGCACATC
TTGTCCTTGGATCTGGCTATTGCAAAAGATAGCTCCATCGCCTGCTCGTG
CTGCTCCAGACACTCACGATTGTGCGCACGGCGTTGGTTCTGATCCATCG
GGTGGAGGCAGTAAAGGTCGCACATCTTGCAAATCTCCATGTGAAGTGGA
TACGAGCACTTACTGCCCCAGATACAGCTGCCACCATATGGACAAATATC
CTGGACACCTTCAGTTGCTTGGAAATCGGCAGAATTGGCTTTGTACCTGG
GAACAAACTCTGGTGCATTTGCCCAGGTCATCTGGCGACTGTAGCTACTG
GTGGAGGCCACCACTTGCTCATTCTCCACGACTTCATCCGCGATTTCCGA
TATCTGCGGACTCTGGTTGTCATTTGGTGTCGTCTCGTCGTGCGAGAATC
GGCATAAATCACCAAAACGACAAATTCCAAGCAAATGGAAGCGACAGATT
GTTTGACTAACGCG

BO15167.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 858 CG5347-RA 113..855 761..19 3690 99.8 Minus
CG5334-PA 633 CG5334-RA 381..553 262..90 815 98.8 Minus
CG5334-PA 633 CG5334-RA 209..363 434..280 450 91.6 Minus
CG7184-PA 1161 Mkrn1-RA 709..756 327..280 140 91.6 Minus
CG7184-PB 1161 Mkrn1-RB 709..756 327..280 140 91.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 119..959 859..19 4205 100 Minus
CG5334-RA 992 CG5334-RA 251..619 443..75 1425 92.4 Minus
Mkrn1-RC 2229 CG7184-RC 696..1171 545..70 745 77.4 Minus
CG5334-RA 992 CG5334-RA 81..202 850..726 245 82.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776892..14777732 859..19 4205 100 Minus
X 23542271 X 14775558..14775926 443..75 1425 92.4 Minus
3L 28110227 3L 21532353..21532630 268..545 460 77.7 Plus
3L 28110227 3L 21531848..21532028 70..250 320 78.5 Plus
3L 28110227 3L 18722609..18722851 175..417 270 74.1 Plus
Blast to na_te.dros performed on 2015-02-10 18:38:01 has no hits.

BO15167.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:42:59 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 113..858 16..761 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:31 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 113..858 16..761 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:50:36 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 114..959 19..864 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:52:22 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 114..959 19..864 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:52:22 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14776887..14777732 19..864 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:50:36 Download gff for BO15167.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670920..14671765 19..864 99   Minus

BO15167.5prime Sequence

859 bp (708 high quality bases) assembled on 2006-06-16

> BO15167.5prime
GAAGTTATCAGTCGACATGTCGTATCGCCGTAGTCAAACAATCTGTCGCT
TCCATTTGCTTGGAATTTGTCGTTTTGGTGATTTATGCCGATTCTCGCAC
GACGAGACGACACCAAATGACAACCAGAGTCCGCAGATATCGGAAATCGC
GGATGAAGTCGTGGAGAATGAGCAAGTGGTGGCCTCCACCAGTAGCTACA
GTCGCCAGATGACCTGGGCAAATGCACCAGAGTTTGTTCCCAGGTACAAA
GCCAATTCTGCCGATTTCCAAGCAACTGAAGGTGTCCAGGATATTTGTCC
ATATGGTGGCAGCTGTATCTGGGGCAGTAAGTGCTCGTATCCACTTCACA
TGGAGATTTGCAAGATGTGCGACCTTTACTGCCTCCACCCGATGGATCAG
AACCAACGCCGTGCGCACAATCGTGAGTGTCTGGAGCAGCACGAGCAGGC
GATGGAGCTATCTTTTGCAATAGCCAGATCCAAGGACAAGATGTGCGGCA
TTTGTTTCGATACCGTCGTGGAGAAGAAGGGACGTGAACGTCGCTTTGGC
ATCTTGTCCAAGTGCAAGCACATATTCTGTTTGACGTGCATTCGCACATG
GCGTCAGGCCCATCAATTTGAGGCCACTGTGACGCGTGGTTGCCCCGAAT
GTCGCGTCTTTTCGGAATTCGTGTGCCCTAGTGCCTACTGGGTGGATACA
AAGGAGGAGAAGGACAAGTTGCTAAGCGAATATCGCGCGGCAATGGGCGC
CAAGGATTGCAAGTACTTCAATGGGGGCTTGGGCAAATGTCCCTTTTGGA
AACAAGTGCTTCTACAGGCACCATCGTCGTTGTGACGATAACCAGACACA
ATCAAATGG

BO15167.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 858 CG5347-RA 1..709 17..725 3495 99.7 Plus
CG5334-PA 633 CG5334-RA 209..363 456..610 450 91.6 Plus
CG5334-PA 633 CG5334-RA 381..478 628..725 390 95.9 Plus
CG7184-PA 1161 Mkrn1-RA 709..756 563..610 140 91.6 Plus
CG7184-PB 1161 Mkrn1-RB 709..756 563..610 140 91.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 105..945 17..858 4185 99.9 Plus
CG5334-RA 992 CG5334-RA 251..619 447..816 1405 92.2 Plus
Mkrn1-RC 2229 CG7184-RC 696..1171 345..821 725 77.2 Plus
CG5334-RA 992 CG5334-RA 81..202 40..164 245 82.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776878..14777718 17..858 4160 99.9 Plus
X 23542271 X 14775558..14775926 447..816 1380 92.2 Plus
3L 28110227 3L 21532353..21532630 622..345 460 77.7 Minus
3L 28110227 3L 21531848..21532028 821..640 275 78 Minus
3L 28110227 3L 18722609..18722851 715..473 270 74.1 Minus
Blast to na_te.dros performed on 2015-02-13 09:17:58 has no hits.

BO15167.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:00 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 1..712 17..728 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:33 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-PA 1..712 17..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:29:16 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 99..945 7..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:10:58 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 99..945 7..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:10:58 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14776872..14777718 7..859 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:29:16 Download gff for BO15167.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670905..14671751 7..859 99   Plus

BO15167.complete Sequence

889 bp (889 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633373

> BO15167.complete
GAAGTTATCAGTCGACATGTCGTATCGCCGTAGTCAAACAATCTGTCGCT
TCCATTTGCTTGGAATTTGTCGTTTTGGTGATTTATGCCGATTCTCGCAC
GACGAGACGACACCAAATGACAACCAGAGTCCGCAGATATCGGAAATCGC
GGATGAAGTCGTGGAGAATGAGCAAGTGGTGGCCTCCACCAGTAGCTACA
GTCGCCAGATGACCTGGGCAAATGCACCAGAGTTTGTTCCCAGGTACAAA
GCCAATTCTGCCGATTTCCAAGCAACTGAAGGTGTCCAGGATATTTGTCC
ATATGGTGGCAGCTGTATCTGGGGCAGTAAGTGCTCGTATCCACTTCACA
TGGAGATTTGCAAGATGTGCGACCTTTACTGCCTCCACCCGATGGATCAG
AACCAACGCCGTGCGCACAATCGTGAGTGTCTGGAGCAGCACGAGCAGGC
GATGGAGCTATCTTTTGCAATAGCCAGATCCAAGGACAAGATGTGCGGCA
TTTGTTTCGATACCGTCGTGGAGAAGAAGGGACGTGAACGTCGCTTTGGC
ATCTTGTCCAAGTGCAAGCACATATTCTGTTTGACGTGCATTCGCACATG
GCGTCAGGCCCATCAATTTGAGGCCACTGTGACGCGTGGTTGCCCCGAAT
GTCGCGTCTTTTCGGAATTCGTGTGCCCTAGTGCCTACTGGGTGGATACA
AAGGAGGAGAAGGACAAGTTGCTAAGCGAATATCGCGCGGCAATGGGCGC
CAAGGATTGCAAGTACTTCAATGGGGGCTTGGGCAAATGTCCCTTTGGAA
ACAAGTGCTTCTACAGGCACCATCGTCGTTGTGACGATAACCAGACACAA
TCAAATGCCGTCAATTCAGACGCAAGCTTTCTAGACCAT

BO15167.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 858 CG5347-PA 1..855 17..871 4275 100 Plus
CG5334-RA 633 CG5334-PA 200..568 447..815 1425 92.4 Plus
Mkrn1-RC 1161 CG7184-PC 491..966 345..820 745 77.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-RA 1210 CG5347-RA 105..959 17..871 4275 100 Plus
CG5334-RA 992 CG5334-RA 251..619 447..815 1425 92.4 Plus
Mkrn1-RC 2229 CG7184-RC 696..1171 345..820 745 77.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14776878..14777732 17..871 4275 100 Plus
X 23542271 X 14775558..14775926 447..815 1425 92.4 Plus
3L 28110227 3L 21532353..21532630 622..345 460 77.7 Minus
3L 28110227 3L 21531848..21532028 820..640 320 78.5 Minus
3L 28110227 3L 18722609..18722851 715..473 270 74.1 Minus
Blast to na_te.dros performed on 2014-11-28 01:02:50 has no hits.

BO15167.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:00 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 1..858 17..874 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:14 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 99..959 7..871 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:22 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..959 17..873 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:00 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 99..959 7..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:05 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
CG5347-RA 105..959 17..873 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:05 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
X 14776878..14777732 17..873 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:22 Download gff for BO15167.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14670911..14671765 17..873 99   Plus

BO15167.pep Sequence

Translation from 16 to 889

> BO15167.pep
MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVE
NEQVVASTSSYSRQMTWANAPEFVPRYKANSADFQATEGVQDICPYGGSC
IWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMELSF
AIARSKDKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQ
FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKY
FNGGLGKCPFGNKCFYRHHRRCDDNQTQSNAVNSDASFLDH

BO15167.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG5347-PA 285 CG5347-PA 1..285 1..285 1588 100 Plus
Mkrn1-PC 386 CG7184-PC 14..322 1..268 901 56.6 Plus
Mkrn1-PB 386 CG7184-PB 14..322 1..268 901 56.6 Plus
Mkrn1-PA 386 CG7184-PA 14..322 1..268 901 56.6 Plus
CG5334-PA 210 CG5334-PA 67..208 144..285 611 76.1 Plus