Clone BO15177 Report

Search the DGRC for BO15177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG2070-RA
Protein status:BO15177.pep: validated full length
Sequenced Size:1009

Clone Sequence Records

BO15177.3prime Sequence

744 bp (689 high quality bases) assembled on 2006-05-29

> BO15177.3prime
ATGGTCTAGAAAGCTTGCTATATTAATTCCCGTCCACTTTTCACTTTCCG
CCCATAGGAATTGGGCATCATCGTCATACTGGGCGGCCGAGCCCACGTGC
TTCTGCTTGCAATCGCTGAAGTATCTTCCAGATACTTTTTCCAAACTGGG
ATCCAGGGCAGCGTACAGGGTCGTCTGTGCGCCATTCCTAGCCGTCTTTA
TGAATATCCATATAATAGGGGCTATGAGCAATTTTCCAAACCACGAACCC
AAAAAGGGTGTATTGCGGAACAGTTCCGTGTTTACTACTCCGGGATGTAG
GGCATTTACCGTGACCCCTGTTCCGCTCAGGCGTTTCGCCAACTCCCTGG
TGAAGAGGACGTTGGCCAATTTGCTCTGACAGTAGGCCATCTTTCTGTCA
TAGGACTTTTCGCTGTTCAGGTCGTCACGCTTAATCCTTCCGAAGCGGTG
AGCAATGCTGGACAGGACCACAACGCGACTGGGCGCGGAACTCTTCAGGA
CATCGAGAAGCAGAAGTGTGAGGAGGAAGTGGCCCATGTGATTCACTCCG
ATTTGCATTTCAAATCCGTCCTCCGTCAGCATTTTGGGGCAGTCCATAAT
GCCGGCGTTGTTGATAAGAATGTGAAGCTTGTTTTGCTCCCGCTTAAAGC
CAGCAGCGAAGTTCCTAATGGACTTCATGGAGCACAGGTCCAATTGGCGT
GCGAAGATGTTCTGGTTGTTGGTCGCCTTTGATGATCTCCCGAC

BO15177.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PA 978 CG2070-RA 268..975 726..19 3540 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:19:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 433..1157 744..19 3605 99.9 Minus
CG2070-RA 1105 CG2070-RA 306..1030 744..19 3605 99.9 Minus
CG2065-RB 1233 CG2065-RB 368..822 724..270 385 72.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 650..233 2090 100 Minus
2R 25286936 2R 7662971..7663184 232..19 1070 100 Minus
2R 25286936 2R 7662336..7662429 744..650 425 98.9 Minus
2R 25286936 2R 7664643..7664797 424..270 235 76.8 Minus
2R 25286936 2R 7666755..7666908 424..271 185 74.7 Minus
2R 25286936 2R 7656260..7656316 388..332 180 87.7 Minus
Blast to na_te.dros performed on 2015-02-12 18:19:37 has no hits.

BO15177.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:09 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 251..978 16..744 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:45 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 251..978 16..744 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:51:13 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 306..1041 10..744 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:03 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 306..1041 10..744 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:03 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7662336..7662429 650..744 98 -> Minus
2R 7662499..7662915 233..649 100 -> Minus
2R 7662971..7663195 10..232 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:51:13 Download gff for BO15177.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549841..3549934 650..744 98 -> Minus
arm_2R 3550004..3550420 233..649 100 -> Minus
arm_2R 3550476..3550700 10..232 98   Minus

BO15177.5prime Sequence

858 bp (787 high quality bases) assembled on 2006-06-16

> BO15177.5prime
GAAGTTATCAGTCGACATGAGTGCACCCACGGATTACCTGTTCTGCCCGC
TGGCATATGGGTCAGCTCTTTCGGCCATCGGAATCTATCTGCTCCGACAA
TATATGCAGGGAGGTCAGTTCACCACGAAAACGAATGAGACCGGCAGAGT
GGCGATTGTGACCGGCTGCAACCAGGGGATTGGCAAGGAGACCGTTCTGG
AGCTGGCCCGCAGGGGAGCTACCGTGTACATGGCTTGTCGGGACATGAAG
AAGTGCGAGAATGCCCGTCGGGAGATCATCAAAGCGACCAACAACCAGAA
CATCTTCGCACGCCAATTGGACCTGTGCTCCATGAAGTCCATTAGGAACT
TCGCTGCTGGCTTTAAGCGGGAGCAAAACAAGCTTCACATTCTTATCAAC
AACGCCGGCATTATGGACTGCCCCAAAATGCTGACGGAGGACGGATTTGA
AATGCAAATCGGAGTGAATCACATGGGCCACTTCCTCCTCACACTTCTGC
TTCTCGATGTCCTGAAGAGTTCCGCGCCCAGTCGCGTTGTGGTCCTGTCC
AGCATTGCTCACCGCTTCGGAAGGATTAAGCGTGACGACCTGAACAGCGA
AAAGTCCTATGACAGAAAGATGGCCTACTGTCAGAGCAAATTGGCCAACG
TCCTCTTCACCAGGGAGTTGGCGAAACGCCTGAGCGGAACAGGGGTCACG
GTAAATGCCCTACATCCCGGAGTAGTAAACACGGAACTGTTCCGCAATAC
ACCCTTTTTGGGTTCGTGGTTTGGAAAATTGCTCATAGCCCCTATTATAT
GGATATTCATAAAGACGGCTAGGAATGGCGCACAGACGACCCTGTACGCT
GCCCTGGA

BO15177.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PA 978 CG2070-RA 1..842 17..858 4210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 183..1024 17..858 4210 100 Plus
CG2070-RA 1105 CG2070-RA 56..897 17..858 4210 100 Plus
CG2065-RB 1233 CG2065-RB 181..822 99..740 630 74 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 360..777 2090 100 Plus
2R 25286936 2R 7662165..7662429 96..360 1325 100 Plus
2R 25286936 2R 7662971..7663051 778..858 405 100 Plus
2R 25286936 2R 7662037..7662116 17..96 400 100 Plus
2R 25286936 2R 7664035..7664296 99..360 350 75.6 Plus
2R 25286936 2R 7664643..7664797 586..740 235 76.8 Plus
Blast to na_te.dros performed on 2015-02-12 12:32:03 has no hits.

BO15177.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:10 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:46 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-PA 1..841 17..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:10:27 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..896 17..857 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:15:48 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..896 17..857 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:15:48 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7662037..7662116 17..96 100 -> Plus
2R 7662166..7662429 97..360 100 -> Plus
2R 7662499..7662915 361..777 100 -> Plus
2R 7662971..7663050 778..857 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:10:27 Download gff for BO15177.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549542..3549621 17..96 100 -> Plus
arm_2R 3549671..3549934 97..360 100 -> Plus
arm_2R 3550004..3550420 361..777 100 -> Plus
arm_2R 3550476..3550555 778..857 100   Plus

BO15177.complete Sequence

1009 bp (1009 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633376

> BO15177.complete
GAAGTTATCAGTCGACATGAGTGCACCCACGGATTACCTGTTCTGCCCGC
TGGCATATGGGTCAGCTCTTTCGGCCATCGGAATCTATCTGCTCCGACAA
TATATGCAGGGAGGTCAGTTCACCACGAAAACGAATGAGACCGGCAGAGT
GGCGATTGTGACCGGCTGCAACCAGGGGATTGGCAAGGAGACCGTTCTGG
AGCTGGCCCGCAGGGGAGCTACCGTGTACATGGCTTGTCGGGACATGAAG
AAGTGCGAGAATGCCCGTCGGGAGATCATCAAAGCGACCAACAACCAGAA
CATCTTCGCACGCCAATTGGACCTGTGCTCCATGAAGTCCATTAGGAACT
TCGCTGCTGGCTTTAAGCGGGAGCAAAACAAGCTTCACATTCTTATCAAC
AACGCCGGCATTATGGACTGCCCCAAAATGCTGACGGAGGACGGATTTGA
AATGCAAATCGGAGTGAATCACATGGGCCACTTCCTCCTCACACTTCTGC
TTCTCGATGTCCTGAAGAGTTCCGCGCCCAGTCGCGTTGTGGTCCTGTCC
AGCATTGCTCACCGCTTCGGAAGGATTAAGCGTGACGACCTGAACAGCGA
AAAGTCCTATGACAGAAAGATGGCCTACTGTCAGAGCAAATTGGCCAACG
TCCTCTTCACCAGGGAGTTGGCGAAACGCCTGAGCGGAACAGGGGTCACG
GTAAATGCCCTACATCCCGGAGTAGTAAACACGGAACTGTTCCGCAATAC
ACCCTTTTTGGGTTCGTGGTTTGGAAAATTGCTCATAGCCCCTATTATAT
GGATATTCATAAAGACGGCTAGGAATGGCGCACAGACGACCCTGTACGCT
GCCCTGGATCCCAGTTTGGAAAAAGTATCTGGAAGATACTTCAGCGATTG
CAAGCAGAAGCACGTGGGCTCGGCCGCCCAGTATGACGATGATGCCCAAT
TCCTATGGGCGGAAAGTGAAAAGTGGACGGGAATTAATATAGCAAGCTTT
CTAGACCAT

BO15177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 978 CG2070-PB 1..975 17..991 4875 100 Plus
CG2070-RA 978 CG2070-PA 1..975 17..991 4875 100 Plus
CG2065-RB 903 CG2065-PB 1..637 104..740 620 73.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-RB 1381 CG2070-RB 183..1157 17..991 4875 100 Plus
CG2070-RA 1105 CG2070-RA 56..1030 17..991 4875 100 Plus
CG2065-RB 1233 CG2065-RB 181..822 99..740 630 73.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7662498..7662915 360..777 2090 100 Plus
2R 25286936 2R 7662165..7662429 96..360 1325 100 Plus
2R 25286936 2R 7662971..7663184 778..991 1070 100 Plus
2R 25286936 2R 7662037..7662116 17..96 400 100 Plus
2R 25286936 2R 7664035..7664296 99..360 350 75.6 Plus
2R 25286936 2R 7664643..7664797 586..740 235 76.8 Plus
Blast to na_te.dros performed on 2014-11-27 14:00:25 has no hits.

BO15177.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:45 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 1..978 17..994 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:57 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 26..1011 17..1000 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:07 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..1030 17..993 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:46 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 26..1011 17..1000 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:15 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
CG2070-RA 56..1030 17..993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:15 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7662971..7663184 778..993 99   Plus
2R 7662037..7662116 17..96 100 -> Plus
2R 7662166..7662429 97..360 100 -> Plus
2R 7662499..7662915 361..777 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:07 Download gff for BO15177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3549542..3549621 17..96 100 -> Plus
arm_2R 3549671..3549934 97..360 100 -> Plus
arm_2R 3550004..3550420 361..777 100 -> Plus
arm_2R 3550476..3550689 778..993 99   Plus

BO15177.pep Sequence

Translation from 16 to 1009

> BO15177.pep
MSAPTDYLFCPLAYGSALSAIGIYLLRQYMQGGQFTTKTNETGRVAIVTG
CNQGIGKETVLELARRGATVYMACRDMKKCENARREIIKATNNQNIFARQ
LDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQIGV
NHMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDR
KMAYCQSKLANVLFTRELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGS
WFGKLLIAPIIWIFIKTARNGAQTTLYAALDPSLEKVSGRYFSDCKQKHV
GSAAQYDDDAQFLWAESEKWTGINIASFLDH

BO15177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2070-PB 325 CG2070-PB 1..325 1..325 1686 100 Plus
CG2070-PA 325 CG2070-PA 1..325 1..325 1686 100 Plus
CG2064-PA 330 CG2064-PA 6..324 6..324 1106 66.5 Plus
CG2065-PB 300 CG2065-PB 1..295 30..324 1105 71.2 Plus
CG2065-PA 300 CG2065-PA 1..295 30..324 1105 71.2 Plus