Clone Sequence Records
BO15191.3prime Sequence
341 bp (341 high quality bases) assembled on 2006-06-16
> BO15191.3prime
ATGGTCTAGAAAGCTTGCACAGGATAATAAGGAATACCTCAATGCATATG
ACTGAATTACGAAGGAGATCACATGGATGATGGGCGACGCGGGCTTTATG
GAGCGCGTGGAGCAGCCTGATCGGTACAGGTCCTCATCCCTTTCACTGCC
ATTCTTGTAACAGGATTTTGGGATATTCAGATCGCCCAACTTGTAGTCGT
CAGGTCCCAAAACTCCGCAGCACTGGCAGCGACTTTCGTAGAATTCCAAA
CTCTTGCGATTCATCCATATTCGAAGTACATCTCCAACAATTTGGTACTG
TTGTGCAAACAGTATAGTCAGCATCATGTCGACTGATAACT
BO15191.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16991-PA | 312 | Tsp66A-RA | 1..309 | 327..19 | 1545 | 100 | Minus |
CG16991-PB | 648 | Tsp66A-RB | 256..532 | 327..51 | 1385 | 100 | Minus |
CG16991-PB | 648 | Tsp66A-RB | 540..574 | 53..19 | 175 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:58:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1977 | 327..19 | 1435 | 96.9 | Minus |
CG42661-RA | 2531 | CG42661-RA | 1593..1911 | 327..19 | 1435 | 96.9 | Minus |
CG42660-RB | 2597 | CG42660-RB | 1659..1977 | 327..19 | 1435 | 96.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:58:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 228..52 | 885 | 100 | Minus |
3L | 28110227 | 3L | 7467760..7467858 | 327..229 | 495 | 100 | Minus |
Blast to na_te.dros performed 2015-02-08 12:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 92..162 | 103 | 60.6 | Plus |
BO15191.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:20 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 15..327 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:44:59 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 15..327 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:48:01 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 14..327 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:51:40 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1981 | 14..327 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:51:40 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467760..7467858 | 229..327 | 100 | -> | Minus |
3L | 7467920..7468096 | 52..228 | 100 | -> | Minus |
3L | 7468156..7468192 | 14..51 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:48:01 Download gff for
BO15191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 229..327 | 100 | -> | Minus |
arm_3L | 7461020..7461196 | 52..228 | 100 | -> | Minus |
arm_3L | 7461256..7461292 | 14..51 | 94 | | Minus |
BO15191.5prime Sequence
341 bp (341 high quality bases) assembled on 2006-06-16
> BO15191.5prime
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTGCAAGCTTTCTAGACC
BO15191.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16991-PA | 312 | Tsp66A-RA | 1..309 | 17..325 | 1545 | 100 | Plus |
CG16991-PB | 648 | Tsp66A-RB | 256..532 | 17..293 | 1385 | 100 | Plus |
CG16991-PB | 648 | Tsp66A-RB | 540..574 | 291..325 | 175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1977 | 17..325 | 1435 | 96.9 | Plus |
CG42661-RA | 2531 | CG42661-RA | 1593..1911 | 17..325 | 1435 | 96.9 | Plus |
CG42660-RB | 2597 | CG42660-RB | 1659..1977 | 17..325 | 1435 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 116..292 | 885 | 100 | Plus |
3L | 28110227 | 3L | 7467760..7467858 | 17..115 | 495 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 21:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 252..182 | 103 | 60.6 | Minus |
BO15191.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:21 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..329 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:01 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16991-PA | 1..312 | 17..329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:51:06 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:06 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1981 | 17..330 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:06 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467920..7468096 | 116..292 | 100 | -> | Plus |
3L | 7468156..7468192 | 293..330 | 94 | | Plus |
3L | 7467760..7467858 | 17..115 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:51:06 Download gff for
BO15191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 17..115 | 100 | -> | Plus |
arm_3L | 7461020..7461196 | 116..292 | 100 | -> | Plus |
arm_3L | 7461256..7461292 | 293..330 | 94 | | Plus |
BO15191.complete Sequence
343 bp (343 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633379
> BO15191.complete
GAAGTTATCAGTCGACATGATGCTGACTATACTGTTTGCACAACAGTACC
AAATTGTTGGAGATGTACTTCGAATATGGATGAATCGCAAGAGTTTGGAA
TTCTACGAAAGTCGCTGCCAGTGCTGCGGAGTTTTGGGACCTGACGACTA
CAAGTTGGGCGATCTGAATATCCCAAAATCCTGTTACAAGAATGGCAGTG
AAAGGGATGAGGACCTGTACCGATCAGGCTGCTCCACGCGCTCCATAAAG
CCCGCGTCGCCCATCATCCATGTGATCTCCTTCGTAATTCAGTCATATGC
ATTGAGGTATTCCTTATTATCCTGTGCAAGCTTTCTAGACCAT
BO15191.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:45:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp66A-RC | 711 | CG16991-PC | 319..637 | 17..325 | 1410 | 96.9 | Plus |
Tsp66A-RD | 711 | CG16991-PD | 319..637 | 17..325 | 1410 | 96.9 | Plus |
Tsp66A-RE | 717 | CG16991-PE | 325..643 | 17..325 | 1410 | 96.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:45:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1977 | 17..325 | 1410 | 96.9 | Plus |
CG42661-RA | 2531 | CG42661-RA | 1593..1911 | 17..325 | 1410 | 96.9 | Plus |
CG42660-RB | 2597 | CG42660-RB | 1659..1977 | 17..325 | 1410 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:45:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 116..292 | 885 | 100 | Plus |
3L | 28110227 | 3L | 7467760..7467858 | 17..115 | 495 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 14:45:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 252..182 | 103 | 60.6 | Minus |
BO15191.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:41 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 1..312 | 17..329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:57 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:32:39 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..528 | 17..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:41 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:52:18 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1977 | 17..327 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:52:18 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467760..7467858 | 17..115 | 100 | -> | Plus |
3L | 7467920..7468096 | 116..292 | 100 | -> | Plus |
3L | 7468156..7468188 | 293..327 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:32:39 Download gff for
BO15191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 17..115 | 100 | -> | Plus |
arm_3L | 7461020..7461196 | 116..292 | 100 | -> | Plus |
arm_3L | 7461256..7461288 | 293..327 | 94 | | Plus |
BO15191.pep Sequence
Translation from 16 to 343
> BO15191.pep
MMLTILFAQQYQIVGDVLRIWMNRKSLEFYESRCQCCGVLGPDDYKLGDL
NIPKSCYKNGSERDEDLYRSGCSTRSIKPASPIIHVISFVIQSYALRYSL
LSCASFLDH
BO15191.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp66A-PC | 236 | CG16991-PC | 107..204 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PD | 236 | CG16991-PD | 107..204 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PE | 238 | CG16991-PE | 109..206 | 1..103 | 493 | 92.2 | Plus |
Tsp66A-PF | 234 | CG16991-PF | 107..202 | 1..103 | 466 | 90.3 | Plus |