Clone BO15192 Report

Search the DGRC for BO15192

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG8791-RA
Protein status:BO15192.pep: validated full length
Sequenced Size:1465

Clone Sequence Records

BO15192.3prime Sequence

719 bp (659 high quality bases) assembled on 2006-05-29

> BO15192.3prime
ATGGTCTAGAAAGCTTGCGTACCGAATGTCTTTATCTGACGTGGGAACAA
TGGACTTTGAATCGTTTTCCTGGTGGCTGCGGAGCGTCATCGTGCTAGAC
GTCGATGGAGGTTCGTTCCAAATCTGAATAGTGGCCTTGCCAAATATCAC
AAAAATTGTGTTGCACACTAGGTAAATACCTCCTGTAATAAAGAATACCA
TGCGCCACTGGCTGGGATCCTCCTCATCCGATACGATCGCTCCCACCACC
AAAGGAGCTATTATGGAGGTCACTCCCGCAATCCCATTGGTGACTCCCAT
CATTGGGCCGGCAAAGTTGGGCGACAGGTCGATGTGATTGATCAGATATC
CACAGGAACAGCCCGCATTGATGCCCACTGCCAGTGTCAGCAGAAGAATG
GCCCACGTTTTCTCATCGGCTGTCATGTAGCCCAGTCCAATCAAACAAGC
CATCGGTCCCCACTGTCCAATCGAATTAAACAGCTTTCGAGCCGTGGTGA
TCGATATAGTGCCTCTGTTGATAAGCAAATCCGATATGGGACTGACCACA
AAGCAGAGCAGGCCCATAGCAAAGTACGGCAGCGAGGAGAGGAAGGCATT
GGACTTGACATTTAGCTGCAGAACCATGCTCATGTAAGTGGGCATTTCGG
TGAGCAGCGTGTAGAAACCCCAGGTGAATCCACAATGGGCTGCCAGCAGA
CCGTAAAAGGCTGGCGACC

BO15192.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 1434 CG8791-RA 731..1431 719..19 3505 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RB 2292 CG8791-RB 1277..1977 719..19 3505 100 Minus
CG8791-RC 1811 CG8791-RC 796..1496 719..19 3505 100 Minus
CG8791-RA 1840 CG8791-RA 825..1525 719..19 3505 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:04:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928907..7929607 719..19 3505 100 Minus
Blast to na_te.dros performed on 2015-02-03 06:04:56 has no hits.

BO15192.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:22 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 731..1434 15..719 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:02 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 731..1434 15..719 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:20:25 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 825..1534 9..719 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:35:55 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 825..1534 9..719 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:35:55 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7928907..7929616 9..719 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:20:25 Download gff for BO15192.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3816412..3817121 9..719 99   Minus

BO15192.5prime Sequence

872 bp (742 high quality bases) assembled on 2006-06-16

> BO15192.5prime
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAATTGTCAAGTCCAATGCCT

BO15192.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 1434 CG8791-RA 1..856 17..872 4255 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1840 CG8791-RA 95..950 17..872 4265 99.9 Plus
CG8791-RB 2292 CG8791-RB 581..1402 51..872 4095 99.9 Plus
CG8791-RC 1811 CG8791-RC 100..921 51..872 4095 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928357..7928813 259..715 2285 100 Plus
2R 25286936 2R 7928086..7928296 51..261 1055 100 Plus
2R 25286936 2R 7928874..7929032 714..872 780 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 19:48:33 has no hits.

BO15192.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:23 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:03 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:31:42 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 87..950 9..872 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:03:17 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 87..950 9..872 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:03:17 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7928086..7928295 51..260 100 -> Plus
2R 7928359..7928813 261..715 100 -> Plus
2R 7928876..7929032 716..872 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:31:42 Download gff for BO15192.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3815591..3815800 51..260 100 -> Plus
arm_2R 3815864..3816318 261..715 100 -> Plus
arm_2R 3816381..3816537 716..872 99   Plus

BO15192.complete Sequence

1465 bp (1465 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633380

> BO15192.complete
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGCCTGCTCTGCTTTGTGGTCAGTCCCATATCGGATTTGCTTATCAACA
GAGGCACTATATCGATCACCACGGCTCGAAAGCTGTTTAATTCGATTGGA
CAGTGGGGACCGATGGCTTGTTTGATTGGACTGGGCTACATGACAGCCGA
TGAGAAAACGTGGGCCATTCTTCTGCTGACACTGGCAGTGGGCATCAATG
CGGGCTGTTCCTGTGGATATCTGATCAATCACATCGACCTGTCGCCCAAC
TTTGCCGGCCCAATGATGGGAGTCACCAATGGGATTGCGGGAGTGACCTC
CATAATAGCTCCTTTGGTGGTGGGAGCGATCGTATCGGATGAGGAGGATC
CCAGCCAGTGGCGCATGGTATTCTTTATTACAGGAGGTATTTACCTAGTG
TGCAACACAATTTTTGTGATATTTGGCAAGGCCACTATTCAGATTTGGAA
CGAACCTCCATCGACGTCTAGCACGATGACGCTCCGCAGCCACCAGGAAA
ACGATTCAAAGTCCATTGTTCCCACGTCAGATAAAGACATTCGGTACGCA
AGCTTTCTAGACCAT

BO15192.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1434 CG8791-PA 1..1431 17..1447 7155 100 Plus
CG8791-RB 1350 CG8791-PB 1..1347 101..1447 6735 100 Plus
CG8791-RC 1350 CG8791-PC 1..1347 101..1447 6735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:20:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-RA 1840 CG8791-RA 95..1525 17..1447 7155 100 Plus
CG8791-RB 2292 CG8791-RB 581..1977 51..1447 6985 100 Plus
CG8791-RC 1811 CG8791-RC 100..1496 51..1447 6985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7928874..7929607 714..1447 3670 100 Plus
2R 25286936 2R 7928357..7928813 259..715 2285 100 Plus
2R 25286936 2R 7928086..7928296 51..261 1055 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:20:56 has no hits.

BO15192.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:49 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 1..1434 17..1451 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:00 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 63..1510 9..1457 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:48 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1525 17..1449 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:49 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 63..1510 9..1457 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:18 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
CG8791-RA 95..1525 17..1449 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:18 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7926747..7926780 17..50 100 -> Plus
2R 7928086..7928295 51..260 100 -> Plus
2R 7928359..7928813 261..715 100 -> Plus
2R 7928876..7929607 716..1449 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:48 Download gff for BO15192.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3814252..3814285 17..50 100 -> Plus
arm_2R 3815591..3815800 51..260 100 -> Plus
arm_2R 3815864..3816318 261..715 100 -> Plus
arm_2R 3816381..3817112 716..1449 99   Plus

BO15192.pep Sequence

Translation from 16 to 1465

> BO15192.pep
MGFEPSEDKARPGGLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQST
AGAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAI
GGILCFFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTER
GLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLF
FWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYG
LLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCF
VVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWA
ILLLTLAVGINAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPL
VVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPST
SSTMTLRSHQENDSKSIVPTSDKDIRYASFLDH

BO15192.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8791-PA 477 CG8791-PA 1..477 1..477 2498 100 Plus
CG8791-PB 449 CG8791-PB 1..449 29..477 2346 100 Plus
CG8791-PC 449 CG8791-PC 1..449 29..477 2346 100 Plus
CG15096-PC 491 CG15096-PC 23..477 7..449 1178 50.5 Plus
CG15096-PA 491 CG15096-PA 23..477 7..449 1178 50.5 Plus