Clone Sequence Records
BO15192.3prime Sequence
719 bp (659 high quality bases) assembled on 2006-05-29
> BO15192.3prime
ATGGTCTAGAAAGCTTGCGTACCGAATGTCTTTATCTGACGTGGGAACAA
TGGACTTTGAATCGTTTTCCTGGTGGCTGCGGAGCGTCATCGTGCTAGAC
GTCGATGGAGGTTCGTTCCAAATCTGAATAGTGGCCTTGCCAAATATCAC
AAAAATTGTGTTGCACACTAGGTAAATACCTCCTGTAATAAAGAATACCA
TGCGCCACTGGCTGGGATCCTCCTCATCCGATACGATCGCTCCCACCACC
AAAGGAGCTATTATGGAGGTCACTCCCGCAATCCCATTGGTGACTCCCAT
CATTGGGCCGGCAAAGTTGGGCGACAGGTCGATGTGATTGATCAGATATC
CACAGGAACAGCCCGCATTGATGCCCACTGCCAGTGTCAGCAGAAGAATG
GCCCACGTTTTCTCATCGGCTGTCATGTAGCCCAGTCCAATCAAACAAGC
CATCGGTCCCCACTGTCCAATCGAATTAAACAGCTTTCGAGCCGTGGTGA
TCGATATAGTGCCTCTGTTGATAAGCAAATCCGATATGGGACTGACCACA
AAGCAGAGCAGGCCCATAGCAAAGTACGGCAGCGAGGAGAGGAAGGCATT
GGACTTGACATTTAGCTGCAGAACCATGCTCATGTAAGTGGGCATTTCGG
TGAGCAGCGTGTAGAAACCCCAGGTGAATCCACAATGGGCTGCCAGCAGA
CCGTAAAAGGCTGGCGACC
BO15192.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 1434 | CG8791-RA | 731..1431 | 719..19 | 3505 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:05:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RB | 2292 | CG8791-RB | 1277..1977 | 719..19 | 3505 | 100 | Minus |
CG8791-RC | 1811 | CG8791-RC | 796..1496 | 719..19 | 3505 | 100 | Minus |
CG8791-RA | 1840 | CG8791-RA | 825..1525 | 719..19 | 3505 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:04:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928907..7929607 | 719..19 | 3505 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:04:56 has no hits.
BO15192.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:22 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 731..1434 | 15..719 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:02 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 731..1434 | 15..719 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:20:25 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 825..1534 | 9..719 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:35:55 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 825..1534 | 9..719 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:35:55 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7928907..7929616 | 9..719 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:20:25 Download gff for
BO15192.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3816412..3817121 | 9..719 | 99 | | Minus |
BO15192.5prime Sequence
872 bp (742 high quality bases) assembled on 2006-06-16
> BO15192.5prime
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAATTGTCAAGTCCAATGCCT
BO15192.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 1434 | CG8791-RA | 1..856 | 17..872 | 4255 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1840 | CG8791-RA | 95..950 | 17..872 | 4265 | 99.9 | Plus |
CG8791-RB | 2292 | CG8791-RB | 581..1402 | 51..872 | 4095 | 99.9 | Plus |
CG8791-RC | 1811 | CG8791-RC | 100..921 | 51..872 | 4095 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928357..7928813 | 259..715 | 2285 | 100 | Plus |
2R | 25286936 | 2R | 7928086..7928296 | 51..261 | 1055 | 100 | Plus |
2R | 25286936 | 2R | 7928874..7929032 | 714..872 | 780 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:48:33 has no hits.
BO15192.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:23 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:03 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:31:42 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 87..950 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:03:17 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 87..950 | 9..872 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:03:17 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7928086..7928295 | 51..260 | 100 | -> | Plus |
2R | 7928359..7928813 | 261..715 | 100 | -> | Plus |
2R | 7928876..7929032 | 716..872 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:31:42 Download gff for
BO15192.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3815591..3815800 | 51..260 | 100 | -> | Plus |
arm_2R | 3815864..3816318 | 261..715 | 100 | -> | Plus |
arm_2R | 3816381..3816537 | 716..872 | 99 | | Plus |
BO15192.complete Sequence
1465 bp (1465 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633380
> BO15192.complete
GAAGTTATCAGTCGACATGGGTTTCGAACCCTCTGAGGATAAGGCAAGGC
CTGGAGGTCTTGGCGTGCGACACTGGCAGGCGGTTCTTCTGTTCGTGGGC
ATGATGATCAACTACTTCCAGCGGGTGAACATCTCGGCTGCCATTGTGCC
CATGACGCAGTCCACCGCGGGGGCTCCGTTCTACACCTGGGATACGTCGG
ACAAGTCCCTGATCCTCAGCAGCTTTTTCTGGGGCTATGTGGTCTCCCAG
GTGCCGGCAGGACTGCTTGCCAAGCGATTTGGAGCCAAGTTAGTGCTGGG
CCTGGCGACTGCAATCGGAGGTATTTTGTGCTTCTTCCATCCCATTGCAG
CCAAAAGCGGGTGGCAGAGTATCTGCGTTCTGCGCGTTCTTACCGGTCTG
GTCCAGGGCACGGTTTATCCGTGTGTCCACACGCTGCTGGCTAAGTGGGT
GCCACGCACTGAGCGGGGACTGCTAACCACTGGCGTTTATTCGGGAGCAC
AGTTCGGAACGGCTGTCATCCTGGTCACCAGTGGCTTCATCTTCGAATCC
AGCATGGGTTGGCCAGGGTTGTTCTACCTTTCCGGAGGTCTCAGCCTCGC
TTGGGCGCTGCTTTTCTTTTGGCAGGCCGCCAATGAACCGGTTACAGCCA
GCAGGATCAGCAAAGGCGAGGTGGAGTATATCGAAAGCCTTACGGGCAGC
AACAGCTCCAGTCAGTCTATGCCTGTGCCCTGGATGTCGATCTTTAGGTC
GCCAGCCTTTTACGGTCTGCTGGCAGCCCATTGTGGATTCACCTGGGGTT
TCTACACGCTGCTCACCGAAATGCCCACTTACATGAGCATGGTTCTGCAG
CTAAATGTCAAGTCCAATGCCTTCCTCTCCTCGCTGCCGTACTTTGCTAT
GGGCCTGCTCTGCTTTGTGGTCAGTCCCATATCGGATTTGCTTATCAACA
GAGGCACTATATCGATCACCACGGCTCGAAAGCTGTTTAATTCGATTGGA
CAGTGGGGACCGATGGCTTGTTTGATTGGACTGGGCTACATGACAGCCGA
TGAGAAAACGTGGGCCATTCTTCTGCTGACACTGGCAGTGGGCATCAATG
CGGGCTGTTCCTGTGGATATCTGATCAATCACATCGACCTGTCGCCCAAC
TTTGCCGGCCCAATGATGGGAGTCACCAATGGGATTGCGGGAGTGACCTC
CATAATAGCTCCTTTGGTGGTGGGAGCGATCGTATCGGATGAGGAGGATC
CCAGCCAGTGGCGCATGGTATTCTTTATTACAGGAGGTATTTACCTAGTG
TGCAACACAATTTTTGTGATATTTGGCAAGGCCACTATTCAGATTTGGAA
CGAACCTCCATCGACGTCTAGCACGATGACGCTCCGCAGCCACCAGGAAA
ACGATTCAAAGTCCATTGTTCCCACGTCAGATAAAGACATTCGGTACGCA
AGCTTTCTAGACCAT
BO15192.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:20:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1434 | CG8791-PA | 1..1431 | 17..1447 | 7155 | 100 | Plus |
CG8791-RB | 1350 | CG8791-PB | 1..1347 | 101..1447 | 6735 | 100 | Plus |
CG8791-RC | 1350 | CG8791-PC | 1..1347 | 101..1447 | 6735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:20:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-RA | 1840 | CG8791-RA | 95..1525 | 17..1447 | 7155 | 100 | Plus |
CG8791-RB | 2292 | CG8791-RB | 581..1977 | 51..1447 | 6985 | 100 | Plus |
CG8791-RC | 1811 | CG8791-RC | 100..1496 | 51..1447 | 6985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:20:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7928874..7929607 | 714..1447 | 3670 | 100 | Plus |
2R | 25286936 | 2R | 7928357..7928813 | 259..715 | 2285 | 100 | Plus |
2R | 25286936 | 2R | 7928086..7928296 | 51..261 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:20:56 has no hits.
BO15192.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:49 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 1..1434 | 17..1451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:00 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 63..1510 | 9..1457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:48 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1525 | 17..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:49 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 63..1510 | 9..1457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:18 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8791-RA | 95..1525 | 17..1449 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:18 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7926747..7926780 | 17..50 | 100 | -> | Plus |
2R | 7928086..7928295 | 51..260 | 100 | -> | Plus |
2R | 7928359..7928813 | 261..715 | 100 | -> | Plus |
2R | 7928876..7929607 | 716..1449 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:48 Download gff for
BO15192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3814252..3814285 | 17..50 | 100 | -> | Plus |
arm_2R | 3815591..3815800 | 51..260 | 100 | -> | Plus |
arm_2R | 3815864..3816318 | 261..715 | 100 | -> | Plus |
arm_2R | 3816381..3817112 | 716..1449 | 99 | | Plus |
BO15192.pep Sequence
Translation from 16 to 1465
> BO15192.pep
MGFEPSEDKARPGGLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQST
AGAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAI
GGILCFFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTER
GLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLF
FWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYG
LLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCF
VVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWA
ILLLTLAVGINAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPL
VVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPST
SSTMTLRSHQENDSKSIVPTSDKDIRYASFLDH
BO15192.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8791-PA | 477 | CG8791-PA | 1..477 | 1..477 | 2498 | 100 | Plus |
CG8791-PB | 449 | CG8791-PB | 1..449 | 29..477 | 2346 | 100 | Plus |
CG8791-PC | 449 | CG8791-PC | 1..449 | 29..477 | 2346 | 100 | Plus |
CG15096-PC | 491 | CG15096-PC | 23..477 | 7..449 | 1178 | 50.5 | Plus |
CG15096-PA | 491 | CG15096-PA | 23..477 | 7..449 | 1178 | 50.5 | Plus |