Clone BO15194 Report

Search the DGRC for BO15194

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG11852-RA
Protein status:BO15194.pep: validated full length
Sequenced Size:784

Clone Sequence Records

BO15194.3prime Sequence

775 bp (722 high quality bases) assembled on 2006-06-16

> BO15194.3prime
ATGGTCTAGAAAGCTTGCGTTCTCGAGGAATAAATCCTCGTAGGCGAAGC
GCTTGAAGAGCTGCGAGAGAACGCTCTTCATGATCTCGGCGATGGCCACA
TGAATGGAGGGATGCAGCTCGTTCCACACCTCCGTCCAGTTGTCGTTGAG
GAACTGATTCAGATTGGTGCCCAATGCCTGGTCGCCATTAAAGAGGTTCT
CCAGCCGAATGTTCATCTTTTGTGGCTCCACCAGAACCTTGAGCTTATCC
ACGCTCAGGTAGGTGCGTCCATTGCGCTGCTGTGTGCCCGGCTTGAATTT
CACCGAAAACTTGGGATTGTGCAACACGATCTCGGCATCGCCATCGCCAC
GAATCGGCAGGATCAGGATGCGTCCATCCGCCACGTACTTGCCCTTCAGC
ACGATCTTGGGAAAGGATCCGTACATCTCAAACTTGCTGGTTGCAGGATC
AGCGCCAAAGCCAACGGCTCTGTCGAACTTCACACTGGACAGGCCCTCCA
CATTCACGTCCCTGAAGTTGAGCTTTAGATTCAGGGAGCCAGTGCGTCCG
TCGGAGATGTCGAAGCGCTTGATCAGGAAGGGCTCCACCTGGGGGAATCC
AGCGGACGGATAGCCGGTCCTCGCGTGCTGTCTGATCAGCATGTGCGACA
CGTTGATGATGCAGCTGGTGTCGCCCATGTGGCAGCGCGGCAGTTCGGGA
GGGAAATTCGAGGCACCGCTAACCAAGCAGCAGAAGAGGGCCACGCAGCC
CAGCTGGAGCAGCATCATGTCGACT

BO15194.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 753 CG11852-RA 67..750 702..19 3420 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..849 768..19 3750 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 463..217 1235 100 Minus
3R 32079331 3R 25237837..25238074 701..464 1190 100 Minus
3R 32079331 3R 25238501..25238699 217..19 995 100 Minus
3R 32079331 3R 25237713..25237779 768..702 335 100 Minus
Blast to na_te.dros performed on 2015-01-30 18:46:42 has no hits.

BO15194.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:26 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 67..753 16..702 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:08 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 67..753 16..702 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:01:58 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 93..854 13..775 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:14:56 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 93..854 13..775 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:14:56 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25237706..25237779 702..775 94 -> Minus
3R 25237837..25238074 464..701 100 -> Minus
3R 25238200..25238445 218..463 100 -> Minus
3R 25238501..25238704 13..217 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:01:58 Download gff for BO15194.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063428..21063501 702..775 94 -> Minus
arm_3R 21063559..21063796 464..701 100 -> Minus
arm_3R 21063922..21064167 218..463 100 -> Minus
arm_3R 21064223..21064426 13..217 98   Minus

BO15194.5prime Sequence

782 bp (743 high quality bases) assembled on 2006-06-16

> BO15194.5prime
GAAGTTATCAGTCGACATGATGCTGCTCCAGCTGGGCTGCGTGGCCCTCT
TCTGCTGCTTGGTTAGCGGTGCCTCGAATTTCCCTCCCGAACTGCCGCGC
TGCCACATGGGCGACACCAGCTGCATCATCAACGTGTCGCACATGCTGAT
CAGACAGCACGCGAGGACCGGCTATCCGTCCGCTGGATTCCCCCAGGTGG
AGCCCTTCCTGATCAAGCGCTTCGACATCTCCGACGGACGCACTGGCTCC
CTGAATCTAAAGCTCAACTTCAGGGACGTGAATGTGGAGGGCCTGTCCAG
TGTGAAGTTCGACAGAGCCGTTGGCTTTGGCGCTGATCCTGCAACCAGCA
AGTTTGAGATGTACGGATCCTTTCCCAAGATCGTGCTGAAGGGCAAGTAC
GTGGCGGATGGACGCATCCTGATCCTGCCGATTCGTGGCGATGGCGATGC
CGAGATCGTGTTGCACAATCCCAAGTTTTCGGTGAAATTCAAGCCGGGCA
CACAGCAGCGCAATGGACGCACCTACCTGAGCGTGGATAAGCTCAAGGTT
CTGGTGGAGCCACAAAAGATGAACATTCGGCTGGAGAACCTCTTTAATGG
CGACCAGGCATTGGGCACCAATCTGAATCAGTTCCTCAACGACAACTGGA
CGGAGGTGTGGAACGAGCTGCATCCCTCCATTCATGTGGCCATCGCCGAG
ATCATGAAGAGCGTTCTCTCGCAGCTCTTCAAGCGCTTCGCCTACGAGGA
TTTATTCCTCGAGAACGCAAGCTTTCTAGACC

BO15194.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 753 CG11852-RA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..849 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 322..568 1235 100 Plus
3R 32079331 3R 25237837..25238074 84..321 1190 100 Plus
3R 32079331 3R 25238501..25238699 568..766 995 100 Plus
3R 32079331 3R 25237713..25237779 17..83 335 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:53:37 has no hits.

BO15194.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:27 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:09 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-PA 1..753 17..769 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:57 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 96..854 9..772 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:46:13 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 96..854 9..772 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:46:13 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25237709..25237779 9..83 94 -> Plus
3R 25237837..25238074 84..321 100 -> Plus
3R 25238200..25238445 322..567 100 -> Plus
3R 25238501..25238704 568..772 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:57 Download gff for BO15194.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063431..21063501 9..83 94 -> Plus
arm_3R 21063559..21063796 84..321 100 -> Plus
arm_3R 21063922..21064167 322..567 100 -> Plus
arm_3R 21064223..21064426 568..772 98   Plus

BO15194.complete Sequence

784 bp (784 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633381

> BO15194.complete
GAAGTTATCAGTCGACATGATGCTGCTCCAGCTGGGCTGCGTGGCCCTCT
TCTGCTGCTTGGTTAGCGGTGCCTCGAATTTCCCTCCCGAACTGCCGCGC
TGCCACATGGGCGACACCAGCTGCATCATCAACGTGTCGCACATGCTGAT
CAGACAGCACGCGAGGACCGGCTATCCGTCCGCTGGATTCCCCCAGGTGG
AGCCCTTCCTGATCAAGCGCTTCGACATCTCCGACGGACGCACTGGCTCC
CTGAATCTAAAGCTCAACTTCAGGGACGTGAATGTGGAGGGCCTGTCCAG
TGTGAAGTTCGACAGAGCCGTTGGCTTTGGCGCTGATCCTGCAACCAGCA
AGTTTGAGATGTACGGATCCTTTCCCAAGATCGTGCTGAAGGGCAAGTAC
GTGGCGGATGGACGCATCCTGATCCTGCCGATTCGTGGCGATGGCGATGC
CGAGATCGTGTTGCACAATCCCAAGTTTTCGGTGAAATTCAAGCCGGGCA
CACAGCAGCGCAATGGACGCACCTACCTGAGCGTGGATAAGCTCAAGGTT
CTGGTGGAGCCACAAAAGATGAACATTCGGCTGGAGAACCTCTTTAATGG
CGACCAGGCATTGGGCACCAATCTGAATCAGTTCCTCAACGACAACTGGA
CGGAGGTGTGGAACGAGCTGCATCCCTCCATTCATGTGGCCATCGCCGAG
ATCATGAAGAGCGTTCTCTCGCAGCTCTTCAAGCGCTTCGCCTACGAGGA
TTTATTCCTCGAGAACGCAAGCTTTCTAGACCAT

BO15194.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 753 CG11852-PA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-RA 1045 CG11852-RA 100..849 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25238200..25238446 322..568 1235 100 Plus
3R 32079331 3R 25237837..25238074 84..321 1190 100 Plus
3R 32079331 3R 25238501..25238699 568..766 995 100 Plus
3R 32079331 3R 25237713..25237779 17..83 335 100 Plus
Blast to na_te.dros performed on 2014-11-27 12:54:33 has no hits.

BO15194.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:50 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 1..753 17..769 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:01:55 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 85..843 9..772 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:54 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 100..849 17..768 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:50 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 85..843 9..772 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:09 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
CG11852-RA 100..849 17..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:09 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25237713..25237779 17..83 100 -> Plus
3R 25237837..25238074 84..321 100 -> Plus
3R 25238200..25238445 322..567 100 -> Plus
3R 25238501..25238699 568..768 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:54 Download gff for BO15194.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21063435..21063501 17..83 100 -> Plus
arm_3R 21063559..21063796 84..321 100 -> Plus
arm_3R 21063922..21064167 322..567 100 -> Plus
arm_3R 21064223..21064421 568..768 99   Plus

BO15194.pep Sequence

Translation from 16 to 784

> BO15194.pep
MMLLQLGCVALFCCLVSGASNFPPELPRCHMGDTSCIINVSHMLIRQHAR
TGYPSAGFPQVEPFLIKRFDISDGRTGSLNLKLNFRDVNVEGLSSVKFDR
AVGFGADPATSKFEMYGSFPKIVLKGKYVADGRILILPIRGDGDAEIVLH
NPKFSVKFKPGTQQRNGRTYLSVDKLKVLVEPQKMNIRLENLFNGDQALG
TNLNQFLNDNWTEVWNELHPSIHVAIAEIMKSVLSQLFKRFAYEDLFLEN
ASFLDH

BO15194.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11852-PA 250 CG11852-PA 1..250 1..250 1311 100 Plus
CG11854-PB 250 CG11854-PB 1..249 2..248 371 34.4 Plus
to-PB 249 CG11853-PB 1..249 3..251 342 30.4 Plus
to-PA 249 CG11853-PA 1..249 3..251 342 30.4 Plus
CG10407-PB 259 CG10407-PB 31..256 19..246 313 30 Plus