Clone BO15195 Report

Search the DGRC for BO15195

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:151
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG17819-RA
Protein status:BO15195.pep: validated full length
Sequenced Size:592

Clone Sequence Records

BO15195.3prime Sequence

590 bp (590 high quality bases) assembled on 2006-06-16

> BO15195.3prime
ATGGTCTAGAAAGCTTGCCTTCCTGTTATTGTTGATCTTTTCGTTAATCC
AATTTACGATCTCCTGAACACCAGACCCTGTCCGCATGGAACATTCCTCA
AAAGTCCAATCTCGACCAGTTAGGCGATATAGGCCCATCAAATCGATAAC
CGTGGACATGGACAGGGATCCCGAGGCGTCCTTCTTGTTGGACACGATCA
GCAGCGGAGCATTATCCAGTTCCTGGTGCATCAAAACATCGCATAAAACA
CATCGCGCCTCGCTTAGCCGCAGTGCATCCGTGCTATCCAGTACAAAAAT
CAAAACATTCACTTTCTTATAATACTTTGGCCAGATCTGGCGATTCTTCA
GTTCTCCGTTAATATCCCACAACTGGACTCTGAAATTATTTATGGTGAAG
CTCCATTCACTAACTTGATTGTTAGATTCCTTGGATTCTCCATTGAAAAT
TTCCGCCAGGCGGTCTGTCAACGTGGATTTTCCCGCATTGTCTAATCCTA
AAATGAGCAGACATGATTTCTGAGAGCCTGCGGGCAGGATCTTTTTTATG
AACGAAACAGGTCCGTAAAAACACATGTCGACTGATAACT

BO15195.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-PA 561 CG17819-RA 1..558 576..19 2790 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-RA 646 CG17819-RA 15..573 577..19 2795 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21884902..21885140 63..301 1195 100 Plus
3R 32079331 3R 21885395..21885536 436..577 710 100 Plus
3R 32079331 3R 21885198..21885332 301..435 675 100 Plus
3R 32079331 3R 21884801..21884847 19..65 235 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:53:15 has no hits.

BO15195.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:45 Download gff for BO15195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-PA 1..561 16..576 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:43:19 Download gff for BO15195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 19..581 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:01:42 Download gff for BO15195.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 19..581 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:42 Download gff for BO15195.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 21884801..21884845 19..63 100 <- Plus
3R 21884903..21885139 64..300 100 <- Plus
3R 21885198..21885332 301..435 100 <- Plus
3R 21885395..21885540 436..581 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:43:19 Download gff for BO15195.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17710523..17710567 19..63 100 <- Plus
arm_3R 17710625..17710861 64..300 100 <- Plus
arm_3R 17710920..17711054 301..435 100 <- Plus
arm_3R 17711117..17711262 436..581 98   Plus

BO15195.5prime Sequence

590 bp (590 high quality bases) assembled on 2006-06-16

> BO15195.5prime
GAAGTTATCAGTCGACATGTGTTTTTACGGACCTGTTTCGTTCATAAAAA
AGATCCTGCCCGCAGGCTCTCAGAAATCATGTCTGCTCATTTTAGGATTA
GACAATGCGGGAAAATCCACGTTGACAGACCGCCTGGCGGAAATTTTCAA
TGGAGAATCCAAGGAATCTAACAATCAAGTTAGTGAATGGAGCTTCACCA
TAAATAATTTCAGAGTCCAGTTGTGGGATATTAACGGAGAACTGAAGAAT
CGCCAGATCTGGCCAAAGTATTATAAGAAAGTGAATGTTTTGATTTTTGT
ACTGGATAGCACGGATGCACTGCGGCTAAGCGAGGCGCGATGTGTTTTAT
GCGATGTTTTGATGCACCAGGAACTGGATAATGCTCCGCTGCTGATCGTG
TCCAACAAGAAGGACGCCTCGGGATCCCTGTCCATGTCCACGGTTATCGA
TTTGATGGGCCTATATCGCCTAACTGGTCGAGATTGGACTTTTGAGGAAT
GTTCCATGCGGACAGGGTCTGGTGTTCAGGAGATCGTAAATTGGATTAAC
GAAAAGATCAACAATAACAGGAAGGCAAGCTTTCTAGACC

BO15195.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-PA 561 CG17819-RA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-RA 646 CG17819-RA 15..573 16..574 2795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21884902..21885140 530..292 1195 100 Minus
3R 32079331 3R 21885395..21885536 157..16 710 100 Minus
3R 32079331 3R 21885198..21885332 292..158 675 100 Minus
3R 32079331 3R 21884801..21884847 574..528 235 100 Minus
Blast to na_te.dros performed on 2015-02-13 09:21:49 has no hits.

BO15195.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:28 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-PA 1..561 17..577 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:10 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-PA 1..561 17..577 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:29:49 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 12..574 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:55:36 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 12..574 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 13:55:36 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21884903..21885139 293..529 100 <- Minus
3R 21885198..21885332 158..292 100 <- Minus
3R 21885395..21885540 12..157 98   Minus
3R 21884801..21884845 530..574 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:29:49 Download gff for BO15195.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17710523..17710567 530..574 100 <- Minus
arm_3R 17710625..17710861 293..529 100 <- Minus
arm_3R 17710920..17711054 158..292 100 <- Minus
arm_3R 17711117..17711262 12..157 98   Minus

BO15195.complete Sequence

592 bp (592 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633382

> BO15195.complete
GAAGTTATCAGTCGACATGTGTTTTTACGGACCTGTTTCGTTCATAAAAA
AGATCCTGCCCGCAGGCTCTCAGAAATCATGTCTGCTCATTTTAGGATTA
GACAATGCGGGAAAATCCACGTTGACAGACCGCCTGGCGGAAATTTTCAA
TGGAGAATCCAAGGAATCTAACAATCAAGTTAGTGAATGGAGCTTCACCA
TAAATAATTTCAGAGTCCAGTTGTGGGATATTAACGGAGAACTGAAGAAT
CGCCAGATCTGGCCAAAGTATTATAAGAAAGTGAATGTTTTGATTTTTGT
ACTGGATAGCACGGATGCACTGCGGCTAAGCGAGGCGCGATGTGTTTTAT
GCGATGTTTTGATGCACCAGGAACTGGATAATGCTCCGCTGCTGATCGTG
TCCAACAAGAAGGACGCCTCGGGATCCCTGTCCATGTCCACGGTTATCGA
TTTGATGGGCCTATATCGCCTAACTGGTCGAGATTGGACTTTTGAGGAAT
GTTCCATGCGGACAGGGTCTGGTGTTCAGGAGATCGTAAATTGGATTAAC
GAAAAGATCAACAATAACAGGAAGGCAAGCTTTCTAGACCAT

BO15195.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-RA 561 CG17819-PA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-RA 646 CG17819-RA 15..573 16..574 2795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:02:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21884902..21885140 530..292 1195 100 Minus
3R 32079331 3R 21885395..21885536 157..16 710 100 Minus
3R 32079331 3R 21885198..21885332 292..158 675 100 Minus
3R 32079331 3R 21884801..21884847 574..528 235 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:02:57 has no hits.

BO15195.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:51 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 1..561 17..577 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:02 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 12..574 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:18 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 16..573 17..576 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:51 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 11..573 12..574 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:21 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
CG17819-RA 16..573 17..576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:21 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21884798..21884845 530..576 95 <- Minus
3R 21884903..21885139 293..529 100 <- Minus
3R 21885198..21885332 158..292 100 <- Minus
3R 21885395..21885535 17..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:18 Download gff for BO15195.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17711117..17711257 17..157 100   Minus
arm_3R 17710520..17710567 530..576 95 <- Minus
arm_3R 17710625..17710861 293..529 100 <- Minus
arm_3R 17710920..17711054 158..292 100 <- Minus

BO15195.pep Sequence

Translation from 16 to 592

> BO15195.pep
MCFYGPVSFIKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKE
SNNQVSEWSFTINNFRVQLWDINGELKNRQIWPKYYKKVNVLIFVLDSTD
ALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLMGLY
RLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNRKASFLDH

BO15195.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG17819-PA 186 CG17819-PA 1..186 1..186 972 100 Plus
dnd-PA 179 CG6560-PA 2..173 5..177 294 34.8 Plus
Arf79F-PJ 182 CG8385-PJ 14..179 17..183 245 33.9 Plus
Arf79F-PI 182 CG8385-PI 14..179 17..183 245 33.9 Plus
Arf79F-PH 182 CG8385-PH 14..179 17..183 245 33.9 Plus