Clone Sequence Records
BO15202.3prime Sequence
504 bp (504 high quality bases) assembled on 2006-06-16
> BO15202.3prime
ATGGTCTAGAAAGCTTGCCAATAGACGACGGTGACGGTGTACACGGCGAA
CCACTCGCCCCTGACCACCACCTCCATTCTGATTACTCTGGTTGGCCTGA
CGCCTCTCGCGGCGGAGCTGACGCCTCAGCCGGCGCAGCCGACGCCTGAG
CCTAATCACTTCCTGGCTGCTGCTGGATCCACTGTCACTGGGCGATGTGG
GCGTAGCTGGTGATGTCGAGGAAGCGGGCGCATCAGGAGTAGCTGGCGAG
GACGGTGTTCCAGTCGCTGGAGTTGGCGAGGTCGGTGTACCAGCAGCTGG
GGATGCTGAAGGTGGTGTTCCAGTCGCTGGGGATGGTGAGGGCGGTGTTC
CAGTCGCTGGAGGTGGCGAGGTTGGGGTTCCAGCCGGTGGAGATGACGCG
GGTGGGGATCCTGCCGCAGGTGGAGAATCGGCGTAGGCAGTTGCTATTAG
GGCCAAAAGCCCAAAGGCGATAACGAATTGGCAACGCATGTCGACTGATA
ACTT
BO15202.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 474 | CG11300-RA | 1..471 | 489..19 | 2355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:14:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..505 | 489..19 | 2355 | 100 | Minus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 386..244 | 250 | 79.2 | Minus |
CG11300-RA | 581 | CG11300-RA | 138..280 | 416..274 | 250 | 79.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:14:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752419 | 489..19 | 2355 | 100 | Minus |
2R | 25286936 | 2R | 23752022..23752164 | 386..244 | 250 | 78.3 | Minus |
2R | 25286936 | 2R | 23752052..23752194 | 416..274 | 250 | 78.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:14:26 has no hits.
BO15202.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:46 Download gff for
BO15202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 15..489 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:13 Download gff for
BO15202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 11..489 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:24:24 Download gff for
BO15202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 11..489 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:24:24 Download gff for
BO15202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752426 | 11..489 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:13 Download gff for
BO15202.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639949 | 11..489 | 99 | | Minus |
BO15202.5prime Sequence
503 bp (502 high quality bases) assembled on 2006-06-16
> BO15202.5prime
GAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGGCAAGCTTTCTAG
ACC
BO15202.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 474 | CG11300-RA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:53:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..505 | 17..487 | 2355 | 100 | Plus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 120..262 | 250 | 79.2 | Plus |
CG11300-RA | 581 | CG11300-RA | 138..280 | 90..232 | 250 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752419 | 17..487 | 2355 | 100 | Plus |
2R | 25286936 | 2R | 23752022..23752164 | 120..262 | 250 | 78.3 | Plus |
2R | 25286936 | 2R | 23752052..23752194 | 90..232 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:53:09 has no hits.
BO15202.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:32 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:16 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-PA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:53 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:45:13 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..512 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:45:13 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752426 | 17..495 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:53 Download gff for
BO15202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639949 | 17..495 | 99 | | Plus |
BO15202.complete Sequence
505 bp (505 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633384
> BO15202.complete
GAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGGCAAGCTTTCTAG
ACCAT
BO15202.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 474 | CG11300-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
CG11300-RA | 474 | CG11300-PA | 74..216 | 120..262 | 250 | 78.3 | Plus |
CG11300-RA | 474 | CG11300-PA | 104..246 | 90..232 | 250 | 78.3 | Plus |
CG11300-RA | 474 | CG11300-PA | 95..156 | 201..262 | 175 | 85.5 | Plus |
CG11300-RA | 474 | CG11300-PA | 185..246 | 111..172 | 175 | 85.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-RA | 581 | CG11300-RA | 35..505 | 17..487 | 2355 | 100 | Plus |
CG11300-RA | 581 | CG11300-RA | 108..250 | 120..262 | 250 | 78.3 | Plus |
CG11300-RA | 581 | CG11300-RA | 138..280 | 90..232 | 250 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23751949..23752419 | 17..487 | 2355 | 100 | Plus |
2R | 25286936 | 2R | 23752022..23752164 | 120..262 | 250 | 78.3 | Plus |
2R | 25286936 | 2R | 23752052..23752194 | 90..232 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:42:17 has no hits.
BO15202.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:53 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 1..474 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:05 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 2..483 | 14..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:38 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..505 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:53 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 2..483 | 14..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:04 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11300-RA | 35..505 | 17..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:04 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23751949..23752419 | 17..489 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:38 Download gff for
BO15202.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19639472..19639942 | 17..489 | 99 | | Plus |
BO15202.pep Sequence
Translation from 16 to 505
> BO15202.pep
MRCQFVIAFGLLALIATAYADSPPAAGSPPASSPPAGTPTSPPPATGTPP
SPSPATGTPPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTSP
SDSGSSSSQEVIRLRRRLRRLRRQLRRERRQANQSNQNGGGGQGRVVRRV
HRHRRLLASFLDH
BO15202.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11300-PA | 157 | CG11300-PA | 1..157 | 1..157 | 812 | 100 | Plus |
CG34105-PA | 157 | CG34105-PA | 1..155 | 1..152 | 242 | 38.1 | Plus |
CG12491-PA | 157 | CG12491-PA | 1..155 | 1..152 | 242 | 38.1 | Plus |
CG13560-PB | 181 | CG13560-PB | 1..174 | 1..137 | 198 | 35.4 | Plus |
CG13560-PA | 181 | CG13560-PA | 1..174 | 1..137 | 198 | 35.4 | Plus |