Clone BO15202 Report

Search the DGRC for BO15202

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG11300-RA
Protein status:BO15202.pep: validated full length
Sequenced Size:505

Clone Sequence Records

BO15202.3prime Sequence

504 bp (504 high quality bases) assembled on 2006-06-16

> BO15202.3prime
ATGGTCTAGAAAGCTTGCCAATAGACGACGGTGACGGTGTACACGGCGAA
CCACTCGCCCCTGACCACCACCTCCATTCTGATTACTCTGGTTGGCCTGA
CGCCTCTCGCGGCGGAGCTGACGCCTCAGCCGGCGCAGCCGACGCCTGAG
CCTAATCACTTCCTGGCTGCTGCTGGATCCACTGTCACTGGGCGATGTGG
GCGTAGCTGGTGATGTCGAGGAAGCGGGCGCATCAGGAGTAGCTGGCGAG
GACGGTGTTCCAGTCGCTGGAGTTGGCGAGGTCGGTGTACCAGCAGCTGG
GGATGCTGAAGGTGGTGTTCCAGTCGCTGGGGATGGTGAGGGCGGTGTTC
CAGTCGCTGGAGGTGGCGAGGTTGGGGTTCCAGCCGGTGGAGATGACGCG
GGTGGGGATCCTGCCGCAGGTGGAGAATCGGCGTAGGCAGTTGCTATTAG
GGCCAAAAGCCCAAAGGCGATAACGAATTGGCAACGCATGTCGACTGATA
ACTT

BO15202.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-PA 474 CG11300-RA 1..471 489..19 2355 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-RA 581 CG11300-RA 35..505 489..19 2355 100 Minus
CG11300-RA 581 CG11300-RA 108..250 386..244 250 79.2 Minus
CG11300-RA 581 CG11300-RA 138..280 416..274 250 79.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23751949..23752419 489..19 2355 100 Minus
2R 25286936 2R 23752022..23752164 386..244 250 78.3 Minus
2R 25286936 2R 23752052..23752194 416..274 250 78.3 Minus
Blast to na_te.dros performed on 2015-02-12 11:14:26 has no hits.

BO15202.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:46 Download gff for BO15202.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-PA 1..474 15..489 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:13 Download gff for BO15202.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..512 11..489 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:24:24 Download gff for BO15202.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..512 11..489 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:24:24 Download gff for BO15202.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23751949..23752426 11..489 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:13 Download gff for BO15202.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19639472..19639949 11..489 99   Minus

BO15202.5prime Sequence

503 bp (502 high quality bases) assembled on 2006-06-16

> BO15202.5prime
GAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGGCAAGCTTTCTAG
ACC

BO15202.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-PA 474 CG11300-RA 1..471 17..487 2355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-RA 581 CG11300-RA 35..505 17..487 2355 100 Plus
CG11300-RA 581 CG11300-RA 108..250 120..262 250 79.2 Plus
CG11300-RA 581 CG11300-RA 138..280 90..232 250 79.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23751949..23752419 17..487 2355 100 Plus
2R 25286936 2R 23752022..23752164 120..262 250 78.3 Plus
2R 25286936 2R 23752052..23752194 90..232 250 78.3 Plus
Blast to na_te.dros performed on 2015-02-11 10:53:09 has no hits.

BO15202.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:32 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-PA 1..474 17..491 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:16 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-PA 1..474 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:53 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..512 17..495 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:45:13 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..512 17..495 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:45:13 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23751949..23752426 17..495 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:53 Download gff for BO15202.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19639472..19639949 17..495 99   Plus

BO15202.complete Sequence

505 bp (505 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633384

> BO15202.complete
GAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTT
TGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCC
CCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGC
GACTGGAACACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAG
CATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACA
CCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGC
TACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGA
TTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAG
AGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCG
AGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTGGCAAGCTTTCTAG
ACCAT

BO15202.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-RA 474 CG11300-PA 1..471 17..487 2355 100 Plus
CG11300-RA 474 CG11300-PA 74..216 120..262 250 78.3 Plus
CG11300-RA 474 CG11300-PA 104..246 90..232 250 78.3 Plus
CG11300-RA 474 CG11300-PA 95..156 201..262 175 85.5 Plus
CG11300-RA 474 CG11300-PA 185..246 111..172 175 85.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-RA 581 CG11300-RA 35..505 17..487 2355 100 Plus
CG11300-RA 581 CG11300-RA 108..250 120..262 250 78.3 Plus
CG11300-RA 581 CG11300-RA 138..280 90..232 250 78.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23751949..23752419 17..487 2355 100 Plus
2R 25286936 2R 23752022..23752164 120..262 250 78.3 Plus
2R 25286936 2R 23752052..23752194 90..232 250 78.3 Plus
Blast to na_te.dros performed on 2014-11-27 13:42:17 has no hits.

BO15202.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:53 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 1..474 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:05 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 2..483 14..495 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:38 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..505 17..489 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:53 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 2..483 14..495 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:04 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
CG11300-RA 35..505 17..489 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:04 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23751949..23752419 17..489 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:38 Download gff for BO15202.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19639472..19639942 17..489 99   Plus

BO15202.pep Sequence

Translation from 16 to 505

> BO15202.pep
MRCQFVIAFGLLALIATAYADSPPAAGSPPASSPPAGTPTSPPPATGTPP
SPSPATGTPPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTSP
SDSGSSSSQEVIRLRRRLRRLRRQLRRERRQANQSNQNGGGGQGRVVRRV
HRHRRLLASFLDH

BO15202.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11300-PA 157 CG11300-PA 1..157 1..157 812 100 Plus
CG34105-PA 157 CG34105-PA 1..155 1..152 242 38.1 Plus
CG12491-PA 157 CG12491-PA 1..155 1..152 242 38.1 Plus
CG13560-PB 181 CG13560-PB 1..174 1..137 198 35.4 Plus
CG13560-PA 181 CG13560-PA 1..174 1..137 198 35.4 Plus