Clone BO15217 Report

Search the DGRC for BO15217

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG30152-RA
Protein status:BO15217.pep: validated full length
Sequenced Size:688

Clone Sequence Records

BO15217.3prime Sequence

686 bp (685 high quality bases) assembled on 2006-06-16

> BO15217.3prime
ATGGTCTAGAAAGCTTGCCTCCTCATCCTTGATGCAGTTCTCGACCAAAT
CCCTCAGATTGGGGTTCTCCATGGCCGCAGCGATGCGCTCCTTGTCATTG
ATTTGCTTGTTAATCTCTTCCTCGGTTTGATGCGCTCCCTTCTTGATGTA
TATGTCTAGCTTTATGTTGTGCGGAAGTCCGCGTTCTACTTTCACGCGTA
TACAGAGTCCAATAAGCGTGGCCAACGAGCAATGTGGCACTGTGGGGTTA
AACTCGATGCGAACAACTGAGACATTGGAGCGCGTGGGCGGCATCACAAA
GATTCCATCCTCGTAGACAACGTTGAGGTCCTCCAAAGTGCACGGCTTCT
CGGGATCGCGAATGCCGCGCAACAGATCGTAGATGGTTTCCTGCAGTTCC
GTCTGATTCTTGTAGCCCAGTTCATGGAGCAGTGCGTCCTCCCCGAAGGC
AATGGCCTCATCATCCATCGACATCTGGCTCGTTTTGCGCACTAACTCGT
CGGCGTTCTGGCTGCGTCCGCTGATACTGGCGCTGCTGCTGCCCGTACCG
CTTTCACTGCTGCCCGTTCCGCCCGCTCTCCCACTATCGCCGCCGCACGA
CGACGTCACAGTTGCGACCGAACTGACGCCGCTGTCGGATTCGGAGAGCT
TGCGCTTTATGTAGGACAGCATGTCGACTGATAACT

BO15217.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-PA 657 CG30152-RA 1..654 672..19 3270 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-RC 1473 CG30152-RC 698..1353 674..19 3280 100 Minus
CG30152-RB 1895 CG30152-RB 179..834 674..19 3280 100 Minus
CG30152-RA 954 CG30152-RA 179..834 674..19 3280 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20671382..20671678 674..378 1485 100 Minus
2R 25286936 2R 20672119..20672273 264..110 760 99.4 Minus
2R 25286936 2R 20671745..20671860 378..263 580 100 Minus
2R 25286936 2R 20672340..20672434 113..19 475 100 Minus
Blast to na_te.dros performed 2015-02-12 11:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 660..724 501..564 151 72.3 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 631..693 520..582 125 70.3 Plus

BO15217.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:43 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-PA 1..657 18..672 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:27 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-PA 1..657 18..672 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:06:34 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 175..843 8..680 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:53:01 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 175..843 8..680 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:53:01 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 20671746..20671858 265..377 100 -> Minus
2R 20672119..20672269 114..264 100 -> Minus
2R 20672340..20672443 8..113 96   Minus
2R 20671378..20671678 378..680 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:06:34 Download gff for BO15217.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16558883..16559183 378..680 99 -> Minus
arm_2R 16559251..16559363 265..377 100 -> Minus
arm_2R 16559624..16559774 114..264 100 -> Minus
arm_2R 16559845..16559948 8..113 96   Minus

BO15217.5prime Sequence

686 bp (685 high quality bases) assembled on 2006-06-16

> BO15217.5prime
GAAGTTATCAGTCGACATGCTGTCCTACATAAAGCGCAAGCTCTCCGAAT
CCGACAGCGGCGTCAGTTCGGTCGCAACTGTGACGTCGTCGTGCGGCGGC
GATAGTGGGAGAGCGGGCGGAACGGGCAGCAGTGAAAGCGGTACGGGCAG
CAGCAGCGCCAGTATCAGCGGACGCAGCCAGAACGCCGACGAGTTAGTGC
GCAAAACGAGCCAGATGTCGATGGATGATGAGGCCATTGCCTTCGGGGAG
GACGCACTGCTCCATGAACTGGGCTACAAGAATCAGACGGAACTGCAGGA
AACCATCTACGATCTGTTGCGCGGCATTCGCGATCCCGAGAAGCCGTGCA
CTTTGGAGGACCTCAACGTTGTCTACGAGGATGGAATCTTTGTGATGCCG
CCCACGCGCTCCAATGTCTCAGTTGTTCGCATCGAGTTTAACCCCACAGT
GCCACATTGCTCGTTGGCCACGCTTATTGGACTCTGTATACGCGTGAAAG
TAGAACGCGGACTTCCGCACAACATAAAGCTAGACATATACATCAAGAAG
GGAGCGCATCAAACCGAGGAAGAGATTAACAAGCAAATCAATGACAAGGA
GCGCATCGCTGCGGCCATGGAGAACCCCAATCTGAGGGATTTGGTCGAGA
ACTGCATCAAGGATGAGGAGGCAAGCTTTCTAGACC

BO15217.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-PA 657 CG30152-RA 1..654 17..670 3270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-RC 1473 CG30152-RC 698..1353 15..670 3280 100 Plus
CG30152-RB 1895 CG30152-RB 179..834 15..670 3280 100 Plus
CG30152-RA 954 CG30152-RA 179..834 15..670 3280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20671382..20671678 15..311 1485 100 Plus
2R 25286936 2R 20672119..20672273 425..579 760 99.4 Plus
2R 25286936 2R 20671745..20671860 311..426 580 100 Plus
2R 25286936 2R 20672340..20672434 576..670 475 100 Plus
Blast to na_te.dros performed 2015-02-11 09:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 660..724 188..125 151 72.3 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 631..693 169..107 125 70.3 Minus

BO15217.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:44 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-PA 1..657 17..671 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:28 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-PA 1..657 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:02:10 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 175..843 9..681 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:12:04 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 175..843 9..681 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:12:04 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20671378..20671678 9..311 99 -> Plus
2R 20671746..20671858 312..424 100 -> Plus
2R 20672119..20672269 425..575 100 -> Plus
2R 20672340..20672443 576..681 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:02:10 Download gff for BO15217.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16558883..16559183 9..311 99 -> Plus
arm_2R 16559251..16559363 312..424 100 -> Plus
arm_2R 16559624..16559774 425..575 100 -> Plus
arm_2R 16559845..16559948 576..681 96   Plus

BO15217.complete Sequence

688 bp (688 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633386

> BO15217.complete
GAAGTTATCAGTCGACATGCTGTCCTACATAAAGCGCAAGCTCTCCGAAT
CCGACAGCGGCGTCAGTTCGGTCGCAACTGTGACGTCGTCGTGCGGCGGC
GATAGTGGGAGAGCGGGCGGAACGGGCAGCAGTGAAAGCGGTACGGGCAG
CAGCAGCGCCAGTATCAGCGGACGCAGCCAGAACGCCGACGAGTTAGTGC
GCAAAACGAGCCAGATGTCGATGGATGATGAGGCCATTGCCTTCGGGGAG
GACGCACTGCTCCATGAACTGGGCTACAAGAATCAGACGGAACTGCAGGA
AACCATCTACGATCTGTTGCGCGGCATTCGCGATCCCGAGAAGCCGTGCA
CTTTGGAGGACCTCAACGTTGTCTACGAGGATGGAATCTTTGTGATGCCG
CCCACGCGCTCCAATGTCTCAGTTGTTCGCATCGAGTTTAACCCCACAGT
GCCACATTGCTCGTTGGCCACGCTTATTGGACTCTGTATACGCGTGAAAG
TAGAACGCGGACTTCCGCACAACATAAAGCTAGACATATACATCAAGAAG
GGAGCGCATCAAACCGAGGAAGAGATTAACAAGCAAATCAATGACAAGGA
GCGCATCGCTGCGGCCATGGAGAACCCCAATCTGAGGGATTTGGTCGAGA
ACTGCATCAAGGATGAGGAGGCAAGCTTTCTAGACCAT

BO15217.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-RC 657 CG30152-PC 1..654 17..670 3270 100 Plus
CG30152-RB 657 CG30152-PB 1..654 17..670 3270 100 Plus
CG30152-RA 657 CG30152-PA 1..654 17..670 3270 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-RC 1473 CG30152-RC 698..1353 15..670 3280 100 Plus
CG30152-RB 1895 CG30152-RB 179..834 15..670 3280 100 Plus
CG30152-RA 954 CG30152-RA 179..834 15..670 3280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20671382..20671678 15..311 1485 100 Plus
2R 25286936 2R 20672119..20672273 425..579 760 99.4 Plus
2R 25286936 2R 20671745..20671860 311..426 580 100 Plus
2R 25286936 2R 20672340..20672434 576..670 475 100 Plus
Blast to na_te.dros performed 2014-11-26 22:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 660..724 188..125 151 72.3 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 631..693 169..107 125 70.3 Minus

BO15217.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:43 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 1..657 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:27 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 176..844 9..681 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:02 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 181..834 17..672 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:43 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 176..844 9..681 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:38 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
CG30152-RA 181..834 17..672 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:38 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20671746..20671858 312..424 100 -> Plus
2R 20672119..20672269 425..575 100 -> Plus
2R 20672340..20672434 576..672 97   Plus
2R 20671384..20671678 17..311 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:02 Download gff for BO15217.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16558889..16559183 17..311 100 -> Plus
arm_2R 16559251..16559363 312..424 100 -> Plus
arm_2R 16559624..16559774 425..575 100 -> Plus
arm_2R 16559845..16559939 576..672 97   Plus

BO15217.pep Sequence

Translation from 16 to 688

> BO15217.pep
MLSYIKRKLSESDSGVSSVATVTSSCGGDSGRAGGTGSSESGTGSSSASI
SGRSQNADELVRKTSQMSMDDEAIAFGEDALLHELGYKNQTELQETIYDL
LRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSL
ATLIGLCIRVKVERGLPHNIKLDIYIKKGAHQTEEEINKQINDKERIAAA
MENPNLRDLVENCIKDEEASFLDH

BO15217.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG30152-PC 218 CG30152-PC 1..218 1..218 1110 100 Plus
CG30152-PB 218 CG30152-PB 1..218 1..218 1110 100 Plus
CG30152-PA 218 CG30152-PA 1..218 1..218 1110 100 Plus
CG30152-PD 152 CG30152-PD 1..152 67..218 792 100 Plus
CG7949-PA 156 CG7949-PA 39..152 97..214 301 51.7 Plus