Clone BO15222 Report

Search the DGRC for BO15222

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptMst98Cb-RA
Protein status:BO15222.pep: validated full length
Sequenced Size:829

Clone Sequence Records

BO15222.3prime Sequence

827 bp (825 high quality bases) assembled on 2006-06-16

> BO15222.3prime
ATGGTCTAGAAAGCTTGCGCATGGTCCGCAAGGACCGAAGCCACAAGGGC
CAGGTCCGCAGGGTCCACACGGTCCGCATGGACCACAGCCTGGTCCGAAG
GGTCCGCAGGGTCCACAGGGTCCGCAAGGACCGCATCCTGGTCCCCAAGG
TCCGCAGGGTCCGCAAGGTCCGCATCCGGGTCCACAGGGTCCACATGGTC
CGCATCTGCCCTCAGCCACTGGGTATTGGTTTGTGGAGAAGCAGGGCAGC
GGACAGCAGGGTCCTCCAGGAGCACATGGTCCAATGGGGCAGGGTGGGCA
CGCTGCACTGGGCTTGTAGTTGATGGGTCCATTTGGATAGCAGCAGTACT
CCCTCGGCGGCGGAATGTCGATGGTTTGGGGCTTCGGCTGGCAGAGGATC
GACTGACACACCTCACGTGGTTCGCAGACGCGCTTGGGATAGCACACCAC
ATAGGGGTCGGGGATCATCGAGGGGTAGTAGATTACTCTGGGTTCTCGCA
CCATCTGCGACACCCAAATCAGCTTGGGCACCTTGATCACCCGCGTGGCA
TCAACGACCTTTGGAATGGTGATCTGCCTGCATCGGTTAACCACCATTGG
CTCCGGCACAATCTTCTCCGTGAACACAACGCGTTTCTTGCAGATCATGC
GTGGTGGTTGCTGCACGGTGATGCATTTGGGGAAGGGTGGTGGAATACGT
GGAGCACATTGTGGCAAGGCCTCCAATTGGGCGGCATTGTAGCACTTGGG
TGAGCACTCGAAGGGACCGCAGCAGGGATCGCATGGACTACAAGGACCGC
ACGGAGAGCACATGTCGACTGATAACT

BO15222.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG18396-PA 798 Mst98Cb-RA 1..795 813..19 3975 100 Minus
CG11719-PA 1005 Mst98Ca-RA 1..587 813..227 2635 97.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Mst98Cb-RA 1066 CG18396-RA 118..912 813..19 3975 100 Minus
Mst98Ca-RA 1319 CG11719-RA 120..774 815..161 2900 96.2 Minus
Mst98Cb-RA 1066 CG18396-RA 757..830 126..53 235 87.8 Minus
Mst98Cb-RA 1066 CG18396-RA 805..878 174..101 235 87.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28292915..28293709 813..19 3975 100 Minus
3R 32079331 3R 28291457..28292111 815..161 2900 96.2 Minus
3R 32079331 3R 28293554..28293627 126..53 235 87.8 Minus
3R 32079331 3R 28293602..28293675 174..101 235 87.8 Minus
Blast to na_te.dros performed on 2015-01-30 18:41:09 has no hits.

BO15222.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:48 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18396-PA 1..798 16..813 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:34 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18396-PA 1..798 16..813 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:01:01 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..918 12..813 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:14:02 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..918 12..813 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:14:02 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 28292915..28293715 12..813 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:01:01 Download gff for BO15222.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24118637..24119437 12..813 99   Minus

BO15222.5prime Sequence

827 bp (821 high quality bases) assembled on 2006-06-16

> BO15222.5prime
GAAGTTATCAGTCGACATGTGCTCTCCGTGCGGTCCTTGTAGTCCATGCG
ATCCCTGCTGCGGTCCCTTCGAGTGCTCACCCAAGTGCTACAATGCCGCC
CAATTGGAGGCCTTGCCACAATGTGCTCCACGTATTCCACCACCCTTCCC
CAAATGCATCACCGTGCAGCAACCACCACGCATGATCTGCAAGAAACGCG
TTGTGTTCACGGAGAAGATTGTGCCGGAGCCAATGGTGGTTAACCGATGC
AGGCAGATCACCATTCCAAAGGTCGTTGATGCCACGCGGGTGATCAAGGT
GCCCAAGCTGATTTGGGTGTCGCAGATGGTGCGAGAACCCAGAGTAATCT
ACTACCCCTCGATGATCCCCGACCCCTATGTGGTGTGCTATCCCAAGCGC
GTCTGCGAACCACGTGAGGTGTGTCAGTCGATCCTCTGCCAGCCGAAGCC
CCAAACCATCGACATTCCGCCGCCGAGGGAGTACTGCTGCTATCCAAATG
GACCCATCAACTACAAGCCCAGTGCAGCGTGCCCACCCTGCCCCATTGGA
CCATGTGCTCCTGGAGGACCCTGCTGTCCGCTGCCCTGCTTCTCCACAAA
CCAATACCCAGTGGCTGAGGGCAGATGCGGACCATGTGGACCCTGTGGAC
CCGGATGCGGACCTTGCGGACCCTGCGGACCTTGGGGACCAGGATGCGGT
CCTTGCGGACCCTGTGGACCCTGCGGACCCTTCGGACCAGGCTGTGGTCC
ATGCGGACCGTGTGGACCCTGCGGACCTGGCCCTTGTGGCTTCGGTCCTT
GCGGACCATGCGCAAGCTTTCTAGACC

BO15222.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG18396-PA 798 Mst98Cb-RA 1..795 17..811 3975 100 Plus
CG11719-PA 1005 Mst98Ca-RA 1..587 17..603 2635 97.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Mst98Cb-RA 1066 CG18396-RA 118..912 17..811 3975 100 Plus
Mst98Ca-RA 1319 CG11719-RA 120..774 15..669 2900 96.2 Plus
Mst98Cb-RA 1066 CG18396-RA 757..830 704..777 235 87.8 Plus
Mst98Cb-RA 1066 CG18396-RA 805..878 656..729 235 87.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28292915..28293709 17..811 3975 100 Plus
3R 32079331 3R 28291457..28292111 15..669 2900 96.2 Plus
3R 32079331 3R 28293554..28293627 704..777 235 87.8 Plus
3R 32079331 3R 28293602..28293675 656..729 235 87.8 Plus
Blast to na_te.dros performed on 2015-02-13 01:16:39 has no hits.

BO15222.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:43:49 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18396-PA 1..798 17..814 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:45:35 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18396-PA 1..798 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:45:07 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..918 17..818 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:06 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..918 17..818 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:06 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28292915..28293715 17..818 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:45:07 Download gff for BO15222.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24118637..24119437 17..818 99   Plus

BO15222.complete Sequence

829 bp (829 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633387

> BO15222.complete
GAAGTTATCAGTCGACATGTGCTCTCCGTGCGGTCCTTGTAGTCCATGCG
ATCCCTGCTGCGGTCCCTTCGAGTGCTCACCCAAGTGCTACAATGCCGCC
CAATTGGAGGCCTTGCCACAATGTGCTCCACGTATTCCACCACCCTTCCC
CAAATGCATCACCGTGCAGCAACCACCACGCATGATCTGCAAGAAACGCG
TTGTGTTCACGGAGAAGATTGTGCCGGAGCCAATGGTGGTTAACCGATGC
AGGCAGATCACCATTCCAAAGGTCGTTGATGCCACGCGGGTGATCAAGGT
GCCCAAGCTGATTTGGGTGTCGCAGATGGTGCGAGAACCCAGAGTAATCT
ACTACCCCTCGATGATCCCCGACCCCTATGTGGTGTGCTATCCCAAGCGC
GTCTGCGAACCACGTGAGGTGTGTCAGTCGATCCTCTGCCAGCCGAAGCC
CCAAACCATCGACATTCCGCCGCCGAGGGAGTACTGCTGCTATCCAAATG
GACCCATCAACTACAAGCCCAGTGCAGCGTGCCCACCCTGCCCCATTGGA
CCATGTGCTCCTGGAGGACCCTGCTGTCCGCTGCCCTGCTTCTCCACAAA
CCAATACCCAGTGGCTGAGGGCAGATGCGGACCATGTGGACCCTGTGGAC
CCGGATGCGGACCTTGCGGACCCTGCGGACCTTGGGGACCAGGATGCGGT
CCTTGCGGACCCTGTGGACCCTGCGGACCCTTCGGACCAGGCTGTGGTCC
ATGCGGACCGTGTGGACCCTGCGGACCTGGCCCTTGTGGCTTCGGTCCTT
GCGGACCATGCGCAAGCTTTCTAGACCAT

BO15222.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
Mst98Cb-RA 798 CG18396-PA 1..795 17..811 3975 100 Plus
Mst98Ca-RA 1005 CG11719-PA 1..653 17..669 2890 96.2 Plus
Mst98Cb-RA 798 CG18396-PA 640..713 704..777 235 87.8 Plus
Mst98Cb-RA 798 CG18396-PA 688..761 656..729 235 87.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
Mst98Cb-RA 1066 CG18396-RA 118..912 17..811 3975 100 Plus
Mst98Ca-RA 1319 CG11719-RA 120..774 15..669 2900 96.2 Plus
Mst98Cb-RA 1066 CG18396-RA 757..830 704..777 235 87.8 Plus
Mst98Cb-RA 1066 CG18396-RA 805..878 656..729 235 87.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28292915..28293709 17..811 3975 100 Plus
3R 32079331 3R 28291457..28292111 15..669 2900 96.2 Plus
3R 32079331 3R 28293554..28293627 704..777 235 87.8 Plus
3R 32079331 3R 28293602..28293675 656..729 235 87.8 Plus
Blast to na_te.dros performed on 2014-11-27 06:51:01 has no hits.

BO15222.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:14 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 1..798 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:40 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 113..913 17..818 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:23 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..912 17..813 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:14 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 113..913 17..818 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:03 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
Mst98Cb-RA 118..912 17..813 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:03 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28292915..28293709 17..813 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:23 Download gff for BO15222.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24118637..24119431 17..813 99   Plus

BO15222.pep Sequence

Translation from 16 to 829

> BO15222.pep
MCSPCGPCSPCDPCCGPFECSPKCYNAAQLEALPQCAPRIPPPFPKCITV
QQPPRMICKKRVVFTEKIVPEPMVVNRCRQITIPKVVDATRVIKVPKLIW
VSQMVREPRVIYYPSMIPDPYVVCYPKRVCEPREVCQSILCQPKPQTIDI
PPPREYCCYPNGPINYKPSAACPPCPIGPCAPGGPCCPLPCFSTNQYPVA
EGRCGPCGPCGPGCGPCGPCGPWGPGCGPCGPCGPCGPFGPGCGPCGPCG
PCGPGPCGFGPCGPCASFLDH

BO15222.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
Mst98Cb-PA 265 CG18396-PA 1..265 1..265 1629 100 Plus
Mst98Ca-PA 334 CG11719-PA 1..291 1..266 1480 89 Plus
Mst84Db-PA 74 CG17934-PA 7..71 202..268 275 62.2 Plus
Mst84Dd-PA 72 CG17935-PA 3..56 180..252 255 63.5 Plus
Mst84Db-PA 74 CG17934-PA 2..73 157..250 244 50.5 Plus
Mst84Dd-PA 72 CG17935-PA 3..61 207..270 233 65.7 Plus
Mst84Db-PA 74 CG17934-PA 3..61 207..265 210 56.5 Plus
Mst87F-PB 56 CG17956-PB 3..55 204..262 207 62.9 Plus
Mst84Dd-PA 72 CG17935-PA 3..55 158..222 167 51.5 Plus