Clone BO15263 Report

Search the DGRC for BO15263

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG15209-RA
Protein status:BO15263.pep: validated full length
Sequenced Size:475

Clone Sequence Records

BO15263.3prime Sequence

473 bp (472 high quality bases) assembled on 2006-06-16

> BO15263.3prime
ATGGTCTAGAAAGCTTGCACGCTCATCGATGGCCTGATTGGGCTGCTCCT
CCGGTCCTTTGGCATTGTAAACATTGCGATTCTGGGACAGATGCCATAGG
GCTAGCAGGCGGGCCAGCTCCGTGTAGGTTAGCTTGCGCAGATCACGTCG
ATCGGCCAGCTTAACTCCGGCGGCCTCTAGCTCCTCCACCAATGTGACGG
CATCGTATTCATCCTCCGGATTCTGCTCATTGCGTGGCGCAATTTTTCCG
ACGAACTCCGACTCTGGCACCGCTTCGCTCTTCACCATGCGCTGCATCTG
CTGCACATGCTGCTGTTTATGCTGACGTTGCTGACCCAATGGCTCGTCGA
CATCTTTTAGCTCCTGTTCGGGATTCATGGGCAGCGAATTGGCCAGGCTG
ACCATGCCGAGGATCACCAGGAAGATGACCGGAATATTGTTGCACCCAAT
GGGTTTCATGTCGACTGATAACT

BO15263.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-PA 444 CG15209-RA 1..441 459..19 2205 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-RA 791 CG15209-RA 40..482 461..19 2215 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10842244..10842686 461..19 2215 100 Minus
Blast to na_te.dros performed 2015-02-12 18:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2349..2391 333..291 116 74.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6854..6889 333..298 108 77.8 Minus
gtwin 7411 gtwin GTWIN 7411bp 2392..2423 379..348 106 81.2 Minus

BO15263.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:20 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-PA 1..444 15..459 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:16 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-PA 1..444 15..459 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:50:26 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 86..538 10..465 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:17 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 36..488 10..465 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:17 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
X 10842240..10842692 10..465 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:50:26 Download gff for BO15263.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10736273..10736725 10..465 98   Minus

BO15263.5prime Sequence

473 bp (472 high quality bases) assembled on 2006-06-16

> BO15263.5prime
GAAGTTATCAGTCGACATGAAACCCATTGGGTGCAACAATATTCCGGTCA
TCTTCCTGGTGATCCTCGGCATGGTCAGCCTGGCCAATTCGCTGCCCATG
AATCCCGAACAGGAGCTAAAAGATGTCGACGAGCCATTGGGTCAGCAACG
TCAGCATAAACAGCAGCATGTGCAGCAGATGCAGCGCATGGTGAAGAGCG
AAGCGGTGCCAGAGTCGGAGTTCGTCGGAAAAATTGCGCCACGCAATGAG
CAGAATCCGGAGGATGAATACGATGCCGTCACATTGGTGGAGGAGCTAGA
GGCCGCCGGAGTTAAGCTGGCCGATCGACGTGATCTGCGCAAGCTAACCT
ACACGGAGCTGGCCCGCCTGCTAGCCCTATGGCATCTGTCCCAGAATCGC
AATGTTTACAATGCCAAAGGACCGGAGGAGCAGCCCAATCAGGCCATCGA
TGAGCGTGCAAGCTTTCTAGACC

BO15263.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-PA 444 CG15209-RA 1..441 17..457 2205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-RA 791 CG15209-RA 40..482 15..457 2215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10842244..10842686 15..457 2215 100 Plus
Blast to na_te.dros performed 2015-02-09 22:46:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2349..2391 143..185 116 74.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6854..6889 143..178 108 77.8 Plus
gtwin 7411 gtwin GTWIN 7411bp 2392..2423 97..128 106 81.2 Plus

BO15263.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:21 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-PA 1..444 17..461 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:17 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-PA 1..444 17..461 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:21 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 86..538 11..466 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:48:32 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 36..488 11..466 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:48:32 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10842240..10842692 11..466 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:21 Download gff for BO15263.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10736273..10736725 11..466 98   Plus

BO15263.complete Sequence

475 bp (475 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633391

> BO15263.complete
GAAGTTATCAGTCGACATGAAACCCATTGGGTGCAACAATATTCCGGTCA
TCTTCCTGGTGATCCTCGGCATGGTCAGCCTGGCCAATTCGCTGCCCATG
AATCCCGAACAGGAGCTAAAAGATGTCGACGAGCCATTGGGTCAGCAACG
TCAGCATAAACAGCAGCATGTGCAGCAGATGCAGCGCATGGTGAAGAGCG
AAGCGGTGCCAGAGTCGGAGTTCGTCGGAAAAATTGCGCCACGCAATGAG
CAGAATCCGGAGGATGAATACGATGCCGTCACATTGGTGGAGGAGCTAGA
GGCCGCCGGAGTTAAGCTGGCCGATCGACGTGATCTGCGCAAGCTAACCT
ACACGGAGCTGGCCCGCCTGCTAGCCCTATGGCATCTGTCCCAGAATCGC
AATGTTTACAATGCCAAAGGACCGGAGGAGCAGCCCAATCAGGCCATCGA
TGAGCGTGCAAGCTTTCTAGACCAT

BO15263.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-RA 444 CG15209-PA 1..441 17..457 2205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-RA 791 CG15209-RA 40..482 15..457 2215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10842244..10842686 15..457 2215 100 Plus
Blast to na_te.dros performed 2014-11-27 14:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2349..2391 143..185 116 74.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6854..6889 143..178 108 77.8 Plus
gtwin 7411 gtwin GTWIN 7411bp 2392..2423 97..128 106 81.2 Plus

BO15263.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:42 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 1..444 17..461 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:59 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 86..538 11..466 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:36:18 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 92..532 17..459 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:43 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 86..538 11..466 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:36 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
CG15209-RA 42..482 17..459 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:36 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
X 10842246..10842686 17..459 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:36:18 Download gff for BO15263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10736279..10736719 17..459 99   Plus

BO15263.pep Sequence

Translation from 16 to 475

> BO15263.pep
MKPIGCNNIPVIFLVILGMVSLANSLPMNPEQELKDVDEPLGQQRQHKQQ
HVQQMQRMVKSEAVPESEFVGKIAPRNEQNPEDEYDAVTLVEELEAAGVK
LADRRDLRKLTYTELARLLALWHLSQNRNVYNAKGPEEQPNQAIDERASF
LDH

BO15263.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15209-PA 147 CG15209-PA 1..147 1..147 755 100 Plus