Clone BO15264 Report

Search the DGRC for BO15264

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG14194-RA
Protein status:BO15264.pep: Imported from assembly
Sequenced Size:1108

Clone Sequence Records

BO15264.3prime Sequence

932 bp (727 high quality bases) assembled on 2006-06-16

> BO15264.3prime
ATGGTCTAGAAAGCTTGCGTCCGGCAGATCGATGCTGACGAACGGAACCA
CCGGCTTGAGAATGTCATTCTTGGCCCCCTTCTTGCTCTTCTTGTCGTGC
TTGTGGAACTCGTGCAGCTGCTCGCTGGCCGCCATGCTCGTCGAGGAGGA
CGCTGCGTCCAGCGGCATGGACTGTGCAGCATTGCTGTGGGTTTCCGGGT
GATAGCTGATGTTGCCGTACTCCTGCAGGAACGGCATCGCGGACAACAGG
AACTGGCTGAAAGACTTGCGGATGCCGAACCACCACATGTTGCCGCCCTT
TGCCGAGGAGCTAAGAACTATTAGCGCCAGAATAGAGACGAGCAGCGGTG
AGAAGACCACGATGTACGGGAACTTAAGCTCGCCGTCCAGCTTGTCGCAG
ATGACCACCTGAAAGCAGAGCAGTGGGAGCACCGTGCAGATGTTGCCCAC
CGCTGCGTTTAATGCCGCCTTCTTCTGCTGCAGCGAGACCTCCGGCGTAC
GCATCATGATGCCACAGAAGATGATGTTATACAATACGCTGACCAGGCTC
AGGCATATGACGATCCACATGGGCACAAACACTACGTCCCAGTTCCAGTA
GACAAAGCGATCCAGCTTTAGCGGCAGTGAAACAAACTGAAGCGCGTTGA
CCGCCAGGAAGAGCTCCAGCTCGAAGGAGCGATCGTGCTTGACGGCCCAG
ACACAGGCGCCCACACTAACCACCGAGCCGAAGATCAGCGGAATGAAGAC
CAGCACCCACAAGTGACGGTCCGAGGTCAGCTTATCGCAGGCCAGCAGCT
CAAACATCAGCAGGATCAGGTGCAGGGCCAGTGAGATGAGCATCGCTTTG
AACTGCGTGTAAGCATCGCCCTCGAGACGATAATGCGGATACCGACACCA
CACAATGGCTCCTACAATTGCGCCCAGGATGG

BO15264.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-PA 1077 CG14194-RA 161..1074 932..19 4520 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-RA 1940 CG14194-RA 438..1351 932..19 4540 99.8 Minus
CG14194-RB 1868 CG14194-RB 386..1279 912..19 4455 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19194475..19195001 932..406 2605 99.6 Minus
X 23542271 X 19195056..19195448 411..19 1965 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:31:13 has no hits.

BO15264.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:22 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14194-PA 161..1077 18..932 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:18 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14194-PA 161..1077 18..932 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:49:08 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 438..1351 19..932 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:03:50 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 438..1351 19..932 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:03:50 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19194475..19194998 409..932 99 -> Minus
X 19195059..19195448 19..408 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:49:08 Download gff for BO15264.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19088508..19089031 409..932 99 -> Minus
arm_X 19089092..19089481 19..408 100   Minus

BO15264.complete Sequence

1108 bp assembled on 2008-08-15

GenBank Submission: FJ633392

> BO15264.complete
GAAGTTATCAGTCGACATGAATCTGGAATCTCTGTTCCGCGACTTCAATC
CCTGCAAGTTCATCGTCCACTGCAGCCTGTTCATCTTTGTCACGCTCTTC
GCCTTGCGCCTCGACAACTACATTGATTGGCCCTACTGGGCGATTTTCAC
ACCGCTATGGATATGGAAATGCACCGCCATCCTGGGCGCAATCGTAGGAG
CCATTGTGTGGTGTCGGTATCCGCATTATCGTCTCGAGGGCGATGCCTAC
ACGCAGTTCAAAGCGATGCTCATCTCACTGGCCCTGCACCTGATCCTGCT
GATGTTTGAGCTGCTGGCCTGCGATAAGCTGACCTCGGACCGTCACTTGT
GGGTGCTGGTCTTCATTCCGCTGATCTTCGGCTCGGTGGTTAGTGTGGGC
GCCTGTGTCTGGGCCGTCAAGCACGATCGCTCCTTCGAGCTGGAGCTCTT
CCTGGCGGTCAACGCGCTTCAGTTTGTTTCACTGCCGCTAAAGCTGGATC
GCTTTGTCTACTGGAACTGGGACGTAGTGTTTGTGCCCATGTGGATCGTC
ATATGCCTGAGCCTGGTCAGCGTATTGTATAACATCATCTTCTGTGGCAT
CATGATGCGTACGCCGGAGGTCTCGCTGCAGCAGAAGAAGGCGGCATTAA
ACGCAGCGGTGGGCAACATCTGCACGGTGCTCCCACTGCTCTGCTTTCAG
GTGGTCATCTGCGACAAGCTGGACGGCGAGCTTAAGTTCCCGTACATCGT
GGTCTTCTCACCGCTGCTCGTCTCTATTCTGGCGCTAATAGTTCTTAGCT
CCTCGGCAAAGGGCGGCAACATGTGGTGGTTCGGCATCCGCAAGTCTTTC
AGCCAGTTCCTGTTGTCCGCGATGCCGTTCCTGCAGGAGTACGGCAACAT
CAGCTATCACCCGGAAACCCACAGCAATGCTGCACAGTCCATGCCGCTGG
ACGCAGCGTCCTCCTCGACGAGCATGGCGGCCAGCGAGCAGCTGCACGAG
TTCCACAAGCACGACAAGAAGAGCAAGAAGGGGGCCAAGAATGACATTCT
CAAGCCGGTGGTTCCGTTCGTCAGCATCGATCTGCCGGACGCAAGCTTTC
TAGACCAT

BO15264.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-RA 1077 CG14194-PA 1..1074 17..1090 5370 100 Plus
CG14194-RB 1005 CG14194-PB 109..1002 197..1090 4470 100 Plus
CG14194-RB 1005 CG14194-PB 1..109 17..125 545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-RA 1940 CG14194-RA 276..1351 15..1090 5380 100 Plus
CG14194-RB 1868 CG14194-RB 386..1279 197..1090 4470 100 Plus
CG14194-RB 1868 CG14194-RB 276..386 15..125 555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19194423..19195001 125..703 2895 100 Plus
X 23542271 X 19195056..19195448 698..1090 1965 100 Plus
X 23542271 X 19193947..19194018 54..125 360 100 Plus
X 23542271 X 19193830..19193869 15..54 200 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:10:07 has no hits.

BO15264.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:29 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 254..1339 4..1090 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:13 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 278..1351 17..1092 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:42 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 266..1339 17..1092 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:17 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 278..1351 17..1092 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:17 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
X 19193832..19193869 17..54 100 -> Plus
X 19193948..19194018 55..125 100 -> Plus
X 19194424..19194998 126..700 100 -> Plus
X 19195059..19195448 701..1092 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:13 Download gff for BO15264.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19087865..19087902 17..54 100 -> Plus
arm_X 19087981..19088051 55..125 100 -> Plus
arm_X 19088457..19089031 126..700 100 -> Plus
arm_X 19089092..19089481 701..1092 99   Plus

BO15264.pep Sequence

Translation from 16 to 1108

> BO15264.pep
MNLESLFRDFNPCKFIVHCSLFIFVTLFALRLDNYIDWPYWAIFTPLWIW
KCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLISLALHLILLMFELL
ACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNA
LQFVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIFCGIMMRTP
EVSLQQKKAALNAAVGNICTVLPLLCFQVVICDKLDGELKFPYIVVFSPL
LVSILALIVLSSSAKGGNMWWFGIRKSFSQFLLSAMPFLQEYGNISYHPE
THSNAAQSMPLDAASSSTSMAASEQLHEFHKHDKKSKKGAKNDILKPVVP
FVSIDLPDASFLDH

BO15264.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-PA 358 CG14194-PA 1..358 1..358 1893 100 Plus
CG14194-PB 334 CG14194-PB 1..334 1..358 1711 93.3 Plus