Clone Sequence Records
BO15264.3prime Sequence
932 bp (727 high quality bases) assembled on 2006-06-16
> BO15264.3prime
ATGGTCTAGAAAGCTTGCGTCCGGCAGATCGATGCTGACGAACGGAACCA
CCGGCTTGAGAATGTCATTCTTGGCCCCCTTCTTGCTCTTCTTGTCGTGC
TTGTGGAACTCGTGCAGCTGCTCGCTGGCCGCCATGCTCGTCGAGGAGGA
CGCTGCGTCCAGCGGCATGGACTGTGCAGCATTGCTGTGGGTTTCCGGGT
GATAGCTGATGTTGCCGTACTCCTGCAGGAACGGCATCGCGGACAACAGG
AACTGGCTGAAAGACTTGCGGATGCCGAACCACCACATGTTGCCGCCCTT
TGCCGAGGAGCTAAGAACTATTAGCGCCAGAATAGAGACGAGCAGCGGTG
AGAAGACCACGATGTACGGGAACTTAAGCTCGCCGTCCAGCTTGTCGCAG
ATGACCACCTGAAAGCAGAGCAGTGGGAGCACCGTGCAGATGTTGCCCAC
CGCTGCGTTTAATGCCGCCTTCTTCTGCTGCAGCGAGACCTCCGGCGTAC
GCATCATGATGCCACAGAAGATGATGTTATACAATACGCTGACCAGGCTC
AGGCATATGACGATCCACATGGGCACAAACACTACGTCCCAGTTCCAGTA
GACAAAGCGATCCAGCTTTAGCGGCAGTGAAACAAACTGAAGCGCGTTGA
CCGCCAGGAAGAGCTCCAGCTCGAAGGAGCGATCGTGCTTGACGGCCCAG
ACACAGGCGCCCACACTAACCACCGAGCCGAAGATCAGCGGAATGAAGAC
CAGCACCCACAAGTGACGGTCCGAGGTCAGCTTATCGCAGGCCAGCAGCT
CAAACATCAGCAGGATCAGGTGCAGGGCCAGTGAGATGAGCATCGCTTTG
AACTGCGTGTAAGCATCGCCCTCGAGACGATAATGCGGATACCGACACCA
CACAATGGCTCCTACAATTGCGCCCAGGATGG
BO15264.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-PA | 1077 | CG14194-RA | 161..1074 | 932..19 | 4520 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1940 | CG14194-RA | 438..1351 | 932..19 | 4540 | 99.8 | Minus |
CG14194-RB | 1868 | CG14194-RB | 386..1279 | 912..19 | 4455 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19194475..19195001 | 932..406 | 2605 | 99.6 | Minus |
X | 23542271 | X | 19195056..19195448 | 411..19 | 1965 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:31:13 has no hits.
BO15264.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:22 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 161..1077 | 18..932 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:18 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-PA | 161..1077 | 18..932 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:49:08 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 438..1351 | 19..932 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:03:50 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 438..1351 | 19..932 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:03:50 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19194475..19194998 | 409..932 | 99 | -> | Minus |
X | 19195059..19195448 | 19..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:49:08 Download gff for
BO15264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19088508..19089031 | 409..932 | 99 | -> | Minus |
arm_X | 19089092..19089481 | 19..408 | 100 | | Minus |
BO15264.complete Sequence
1108 bp assembled on 2008-08-15
GenBank Submission: FJ633392
> BO15264.complete
GAAGTTATCAGTCGACATGAATCTGGAATCTCTGTTCCGCGACTTCAATC
CCTGCAAGTTCATCGTCCACTGCAGCCTGTTCATCTTTGTCACGCTCTTC
GCCTTGCGCCTCGACAACTACATTGATTGGCCCTACTGGGCGATTTTCAC
ACCGCTATGGATATGGAAATGCACCGCCATCCTGGGCGCAATCGTAGGAG
CCATTGTGTGGTGTCGGTATCCGCATTATCGTCTCGAGGGCGATGCCTAC
ACGCAGTTCAAAGCGATGCTCATCTCACTGGCCCTGCACCTGATCCTGCT
GATGTTTGAGCTGCTGGCCTGCGATAAGCTGACCTCGGACCGTCACTTGT
GGGTGCTGGTCTTCATTCCGCTGATCTTCGGCTCGGTGGTTAGTGTGGGC
GCCTGTGTCTGGGCCGTCAAGCACGATCGCTCCTTCGAGCTGGAGCTCTT
CCTGGCGGTCAACGCGCTTCAGTTTGTTTCACTGCCGCTAAAGCTGGATC
GCTTTGTCTACTGGAACTGGGACGTAGTGTTTGTGCCCATGTGGATCGTC
ATATGCCTGAGCCTGGTCAGCGTATTGTATAACATCATCTTCTGTGGCAT
CATGATGCGTACGCCGGAGGTCTCGCTGCAGCAGAAGAAGGCGGCATTAA
ACGCAGCGGTGGGCAACATCTGCACGGTGCTCCCACTGCTCTGCTTTCAG
GTGGTCATCTGCGACAAGCTGGACGGCGAGCTTAAGTTCCCGTACATCGT
GGTCTTCTCACCGCTGCTCGTCTCTATTCTGGCGCTAATAGTTCTTAGCT
CCTCGGCAAAGGGCGGCAACATGTGGTGGTTCGGCATCCGCAAGTCTTTC
AGCCAGTTCCTGTTGTCCGCGATGCCGTTCCTGCAGGAGTACGGCAACAT
CAGCTATCACCCGGAAACCCACAGCAATGCTGCACAGTCCATGCCGCTGG
ACGCAGCGTCCTCCTCGACGAGCATGGCGGCCAGCGAGCAGCTGCACGAG
TTCCACAAGCACGACAAGAAGAGCAAGAAGGGGGCCAAGAATGACATTCT
CAAGCCGGTGGTTCCGTTCGTCAGCATCGATCTGCCGGACGCAAGCTTTC
TAGACCAT
BO15264.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1077 | CG14194-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
CG14194-RB | 1005 | CG14194-PB | 109..1002 | 197..1090 | 4470 | 100 | Plus |
CG14194-RB | 1005 | CG14194-PB | 1..109 | 17..125 | 545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-RA | 1940 | CG14194-RA | 276..1351 | 15..1090 | 5380 | 100 | Plus |
CG14194-RB | 1868 | CG14194-RB | 386..1279 | 197..1090 | 4470 | 100 | Plus |
CG14194-RB | 1868 | CG14194-RB | 276..386 | 15..125 | 555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19194423..19195001 | 125..703 | 2895 | 100 | Plus |
X | 23542271 | X | 19195056..19195448 | 698..1090 | 1965 | 100 | Plus |
X | 23542271 | X | 19193947..19194018 | 54..125 | 360 | 100 | Plus |
X | 23542271 | X | 19193830..19193869 | 15..54 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:10:07 has no hits.
BO15264.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:29 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 254..1339 | 4..1090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:13 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 278..1351 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:42 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 266..1339 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:17 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14194-RA | 278..1351 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:17 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19193832..19193869 | 17..54 | 100 | -> | Plus |
X | 19193948..19194018 | 55..125 | 100 | -> | Plus |
X | 19194424..19194998 | 126..700 | 100 | -> | Plus |
X | 19195059..19195448 | 701..1092 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:13 Download gff for
BO15264.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19087865..19087902 | 17..54 | 100 | -> | Plus |
arm_X | 19087981..19088051 | 55..125 | 100 | -> | Plus |
arm_X | 19088457..19089031 | 126..700 | 100 | -> | Plus |
arm_X | 19089092..19089481 | 701..1092 | 99 | | Plus |
BO15264.pep Sequence
Translation from 16 to 1108
> BO15264.pep
MNLESLFRDFNPCKFIVHCSLFIFVTLFALRLDNYIDWPYWAIFTPLWIW
KCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLISLALHLILLMFELL
ACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNA
LQFVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIFCGIMMRTP
EVSLQQKKAALNAAVGNICTVLPLLCFQVVICDKLDGELKFPYIVVFSPL
LVSILALIVLSSSAKGGNMWWFGIRKSFSQFLLSAMPFLQEYGNISYHPE
THSNAAQSMPLDAASSSTSMAASEQLHEFHKHDKKSKKGAKNDILKPVVP
FVSIDLPDASFLDH
BO15264.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:41:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14194-PA | 358 | CG14194-PA | 1..358 | 1..358 | 1893 | 100 | Plus |
CG14194-PB | 334 | CG14194-PB | 1..334 | 1..358 | 1711 | 93.3 | Plus |