Clone BO15267 Report

Search the DGRC for BO15267

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7911-RA
Protein status:BO15267.pep: Imported from assembly
Sequenced Size:502

Clone Sequence Records

BO15267.5prime Sequence

500 bp (500 high quality bases) assembled on 2006-06-16

> BO15267.5prime
GAAGTTATCAGTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGGCAAGCTTTCTAGACC

BO15267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PA 471 CG7911-RA 1..468 17..484 2340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..564 17..484 2340 100 Plus
CG7911-RA 818 CG7911-RA 259..726 17..484 2340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:05:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 354..182 865 100 Minus
3R 32079331 3R 30004303..30004450 185..38 740 100 Minus
3R 32079331 3R 30003773..30003906 484..351 670 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:05:50 has no hits.

BO15267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:43:10 Download gff for BO15267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 17..485 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:10:29 Download gff for BO15267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 17..484 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:42:42 Download gff for BO15267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 17..484 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:42:42 Download gff for BO15267.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30003990..30004157 185..352 100 <- Minus
3R 30004304..30004449 39..184 100 <- Minus
3R 30004582..30004603 17..38 100   Minus
3R 30003773..30003904 353..484 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:10:29 Download gff for BO15267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829495..25829626 353..484 100 <- Minus
arm_3R 25829712..25829879 185..352 100 <- Minus
arm_3R 25830026..25830171 39..184 100 <- Minus
arm_3R 25830304..25830325 17..38 100   Minus

BO15267.3prime Sequence

500 bp (499 high quality bases) assembled on 2006-06-16

> BO15267.3prime
ATGGTCTAGAAAGCTTGCCTTCTTCTTATTACTCTTGCCGTTCGTCTGAG
GAGCTGCTTCTTCGTCGAATTCCAGTTCGCTATCCTCCTCCTCGTCCGAA
TACTCCTCGTAAATCTGACCGTCGTCAAACTCGCCAAAGTTCATCTCGAC
CTTGCCGCATACGTGTACGGGTCCACTTCCCTGCACCAGTTTGAAGGTCA
CTGATCCATTGGGGAACTCGACATTTGGTCTTAAGCTACGGGTCTCGCCG
ACCTTCAACACGGCAATGGGGATCTTCAAGGTTTTCTTCTCGCCATCGTC
GTTTATGTTCGTCTCCGCCTGTACAACGTTGAATTCGCCGGTCTTCGCTT
CTGGGCCGAGGGAAATCTGTTTGATGATGAGCTTGTGCGAGTGGACGATG
TACTCCTCGGGTACATCTGGGACCTCGAACTGTGCGATGGCCTCCTTCTC
GCTGAGTGTGACACCATAAAACGACTCGGACTCCATGTCGACTGATAACT

BO15267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PA 471 CG7911-RA 1..468 486..19 2340 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..564 486..19 2340 100 Minus
CG7911-RA 818 CG7911-RA 259..726 486..19 2340 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 149..321 865 100 Plus
3R 32079331 3R 30004303..30004450 318..465 740 100 Plus
3R 32079331 3R 30003773..30003906 19..152 670 100 Plus
Blast to na_te.dros performed on 2015-02-02 18:52:16 has no hits.

BO15267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:25 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 18..486 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:21 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 18..486 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:50:14 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 19..486 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:04:34 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 19..486 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:04:34 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30003773..30003904 19..150 100 <- Plus
3R 30003990..30004157 151..318 100 <- Plus
3R 30004304..30004449 319..464 100 <- Plus
3R 30004582..30004603 465..486 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:50:14 Download gff for BO15267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829495..25829626 19..150 100 <- Plus
arm_3R 25829712..25829879 151..318 100 <- Plus
arm_3R 25830026..25830171 319..464 100 <- Plus
arm_3R 25830304..25830325 465..486 100   Plus

BO15267.complete Sequence

502 bp assembled on 2008-08-15

GenBank Submission: FJ633393

> BO15267.complete
GAAGTTATCAGTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGGCAAGCTTTCTAGACC
AT

BO15267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 471 CG7911-PB 1..468 17..484 2340 100 Plus
CG7911-RA 471 CG7911-PA 1..468 17..484 2340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..564 17..484 2340 100 Plus
CG7911-RA 818 CG7911-RA 259..726 17..484 2340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 354..182 865 100 Minus
3R 32079331 3R 30004303..30004450 185..38 740 100 Minus
3R 32079331 3R 30003773..30003906 484..351 670 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:47:58 has no hits.

BO15267.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:43 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RB 79..546 17..484 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:44 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 17..486 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:55:50 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RB 79..546 17..486 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:07 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..726 17..486 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:07 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30004582..30004603 17..38 100   Minus
3R 30003771..30003904 353..486 98 <- Minus
3R 30003990..30004157 185..352 100 <- Minus
3R 30004304..30004449 39..184 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:44 Download gff for BO15267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829493..25829626 353..486 98 <- Minus
arm_3R 25829712..25829879 185..352 100 <- Minus
arm_3R 25830026..25830171 39..184 100 <- Minus
arm_3R 25830304..25830325 17..38 100   Minus

BO15267.pep Sequence

Translation from 16 to 502

> BO15267.pep
MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTG
EFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKL
VQGSGPVHVCGKVEMNFGEFDDGQIYEEYSDEEEDSELEFDEEAAPQTNG
KSNKKKASFLDH

BO15267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PB 156 CG7911-PB 1..156 1..156 804 100 Plus
CG7911-PA 156 CG7911-PA 1..156 1..156 804 100 Plus
Nlp-PB 152 CG7917-PB 1..152 1..156 283 45.7 Plus
Nlp-PA 152 CG7917-PA 1..152 1..156 283 45.7 Plus