Clone BO15295 Report

Search the DGRC for BO15295

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:152
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG1971-RB
Protein status:BO15295.pep: full length peptide match
Sequenced Size:670

Clone Sequence Records

BO15295.3prime Sequence

668 bp (667 high quality bases) assembled on 2006-06-16

> BO15295.3prime
ATGGTCTAGAAAGCTTGCCCGATCGGCCCTTATATCCGCCCCCGATTCGT
TATTGGACCGCTCCGGCTGCTCTACCTCGCTGTCTATGTCCCCCTCGTAG
CCCGAATTTGTTTTCGAGGCAACGGGAAGGGGATTGTGCCCTTTAGACAG
GAAGGACTCGTCCAAGGTGCAGCAGCTACAAAAGCACTCCTTAAAATGAC
GGCAGGTATCCCCAAGTTTCTCGGGGGCCGCCTCTAAGACCTTGTTGAAT
GCTTCGATCTTCTCGCGCAGGCTGCGGCTGGCACTGGGACACCCAAAGAG
CTGACTTCCTTGTGGAGACGGCCGTGAAGATTCGCTGCCAATCTTCTCTA
GAAAGCCGAGAACCTTCTCCAGTGAGTCTCGGGCACGTTTGAAGTTCTCC
TGGCTCTCCCGCAGAACTTGGCTTTCATTGAGGTGCTCAAATTCCACCAA
TAGACCTTGAATCTCGGTGAGGTCAGAAGGCAAACTCATGCCCGCCACGG
CGGAGGTTTGCGGGGCGTTCACAGCATTAACCGTCTCGAAACCCACGATC
AGTCGCTGTATCTTGGAGGCCCCGGCGCGGTGGCCACACCTCGCGAGCTG
CATCATGTCGTTCACATCGCCCACCTCCTTGAGCAACTGCACCGACGACT
GCATGTCGACTGATAACT

BO15295.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-PA 792 CG1971-RA 154..789 654..19 3180 100 Minus
CG1971-PB 639 CG1971-RB 1..636 654..19 3180 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-RD 1028 CG1971-RD 133..768 654..19 3180 100 Minus
CG1971-RC 1034 CG1971-RC 139..774 654..19 3180 100 Minus
CG1971-RB 1106 CG1971-RB 211..846 654..19 3180 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31805874..31806509 654..19 3180 100 Minus
Blast to na_te.dros performed on 2015-02-02 18:44:40 has no hits.

BO15295.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:46 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-PB 1..639 15..654 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:49 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-PB 1..639 15..654 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:49:36 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-RA 277..918 15..660 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:03:47 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 208..849 15..660 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:03:47 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 31805871..31806512 15..660 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:49:36 Download gff for BO15295.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27631593..27632234 15..660 99   Minus

BO15295.5prime Sequence

668 bp (667 high quality bases) assembled on 2006-05-29

> BO15295.5prime
GAAGTTATCAGTCGACATGCAGTCGTCGGTGCAGTTGCTCAAGGAGGTGG
GCGATGTGAACGACATGATGCAGCTCGCGAGGTGTGGCCACCGCGCCGGG
GCCTCCAAGATACAGCGACTGATCGTGGGTTTCGAGACGGTTAATGCTGT
GAACGCCCCGCAAACCTCCGCCGTGGCGGGCATGAGTTTGCCTTCTGACC
TCACCGAGATTCAAGGTCTATTGGTGGAATTTGAGCACCTCAATGAAAGC
CAAGTTCTGCGGGAGAGCCAGGAGAACTTCAAACGTGCCCGAGACTCACT
GGAGAAGGTTCTCGGCTTTCTAGAGAAGATTGGCAGCGAATCTTCACGGC
CGTCTCCACAAGGAAGTCAGCTCTTTGGGTGTCCCAGTGCCAGCCGCAGC
CTGCGCGAGAAGATCGAAGCATTCAACAAGGTCTTAGAGGCGGCCCCCGA
GAAACTTGGGGATACCTGCCGTCATTTTAAGGAGTGCTTTTGTAGCTGCT
GCACCTTGGACGAGTCCTTCCTGTCTAAAGGGCACAATCCCCTTCCCGTT
GCCTCGAAAACAAATTCGGGCTACGAGGGGGACATAGACAGCGAGGTAGA
GCAGCCGGAGCGGTCCAATAACGAATCGGGGGCGGATATAAGGGCCGATC
GGGCAAGCTTTCTAGACC

BO15295.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-PA 792 CG1971-RA 154..789 17..652 3180 100 Plus
CG1971-PB 639 CG1971-RB 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-RD 1028 CG1971-RD 133..768 17..652 3180 100 Plus
CG1971-RC 1034 CG1971-RC 139..774 17..652 3180 100 Plus
CG1971-RB 1106 CG1971-RB 211..846 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:03:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31805874..31806509 17..652 3180 100 Plus
Blast to na_te.dros performed on 2015-02-04 02:03:18 has no hits.

BO15295.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:47 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-PB 1..639 17..656 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:50 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-PB 1..639 17..656 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:42:09 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-RA 277..918 11..656 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:27 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 208..849 11..656 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:27 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31805871..31806512 11..656 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:09 Download gff for BO15295.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27631593..27632234 11..656 99   Plus

BO15295.complete Sequence

670 bp (670 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633396

> BO15295.complete
GAAGTTATCAGTCGACATGCAGTCGTCGGTGCAGTTGCTCAAGGAGGTGG
GCGATGTGAACGACATGATGCAGCTCGCGAGGTGTGGCCACCGCGCCGGG
GCCTCCAAGATACAGCGACTGATCGTGGGTTTCGAGACGGTTAATGCTGT
GAACGCCCCGCAAACCTCCGCCGTGGCGGGCATGAGTTTGCCTTCTGACC
TCACCGAGATTCAAGGTCTATTGGTGGAATTTGAGCACCTCAATGAAAGC
CAAGTTCTGCGGGAGAGCCAGGAGAACTTCAAACGTGCCCGAGACTCACT
GGAGAAGGTTCTCGGCTTTCTAGAGAAGATTGGCAGCGAATCTTCACGGC
CGTCTCCACAAGGAAGTCAGCTCTTTGGGTGTCCCAGTGCCAGCCGCAGC
CTGCGCGAGAAGATCGAAGCATTCAACAAGGTCTTAGAGGCGGCCCCCGA
GAAACTTGGGGATACCTGCCGTCATTTTAAGGAGTGCTTTTGTAGCTGCT
GCACCTTGGACGAGTCCTTCCTGTCTAAAGGGCACAATCCCCTTCCCGTT
GCCTCGAAAACAAATTCGGGCTACGAGGGGGACATAGACAGCGAGGTAGA
GCAGCCGGAGCGGTCCAATAACGAATCGGGGGCGGATATAAGGGCCGATC
GGGCAAGCTTTCTAGACCAT

BO15295.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-RD 639 CG1971-PD 1..636 17..652 3180 100 Plus
CG1971-RC 639 CG1971-PC 1..636 17..652 3180 100 Plus
CG1971-RB 639 CG1971-PB 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-RD 1028 CG1971-RD 133..768 17..652 3180 100 Plus
CG1971-RC 1034 CG1971-RC 139..774 17..652 3180 100 Plus
CG1971-RB 1106 CG1971-RB 211..846 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31805874..31806509 17..652 3180 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:01:56 has no hits.

BO15295.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:08 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 1..639 17..656 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:44 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 136..777 11..656 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:23 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
CG1971-RA 280..915 17..654 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:08 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 136..777 11..656 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:58 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
CG1971-RB 211..846 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:58 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31805874..31806509 17..654 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:23 Download gff for BO15295.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27631596..27632231 17..654 99   Plus

BO15295.pep Sequence

Translation from 16 to 670

> BO15295.pep
MQSSVQLLKEVGDVNDMMQLARCGHRAGASKIQRLIVGFETVNAVNAPQT
SAVAGMSLPSDLTEIQGLLVEFEHLNESQVLRESQENFKRARDSLEKVLG
FLEKIGSESSRPSPQGSQLFGCPSASRSLREKIEAFNKVLEAAPEKLGDT
CRHFKECFCSCCTLDESFLSKGHNPLPVASKTNSGYEGDIDSEVEQPERS
NNESGADIRADRASFLDH

BO15295.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG1971-PD 212 CG1971-PD 1..212 1..212 1084 100 Plus
CG1971-PC 212 CG1971-PC 1..212 1..212 1084 100 Plus
CG1971-PB 212 CG1971-PB 1..212 1..212 1084 100 Plus
CG1971-PA 263 CG1971-PA 52..263 1..212 1084 100 Plus