Clone BO15303 Report

Search the DGRC for BO15303

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14457-RA
Protein status:BO15303.pep: validated not full length
Sequenced Size:466

Clone Sequence Records

BO15303.3prime Sequence

464 bp (463 high quality bases) assembled on 2006-06-16

> BO15303.3prime
ATGGTCTAGAAAGCTTGCTTTCGGTTTCGGCTTGGCTCTTCCATAAAGCT
GTTCCGGCGTCGGGATGTCGCTCACAAAGAAGTTGGCTGGAATGAAGTGA
AATATCTTCTTCAGCACATCCAGCAGAATGTCCTCGATGGTCTGGGTGAT
GACCGTGTACAGGGCATCGGCCAGCATCCGCCAGTTGTCGTTGAAGAACT
TGTTGGTGCTGTCCTCCAGCTGCTTATTGCCATTAAACAGATTGGAGAAG
TACGACTTGAGCCCGTCCATTTTAAAATCCACGTGCAGGTTGGTCACGTT
GTAGAAAGTGAACCCACCCTTGGAGTAGAGCCGAGTCTTCGTGTGCATGG
TGACCGTCATGTTCTCCGCGTCCAGGAACACCTGGCCCTTTCCGTTGAGC
GGGATGAGCAGGATCCGACCGAAAAGACTGTAGTCCGCCTGGAGCTTCAT
GTCGACTGATAACT

BO15303.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 435 CG14457-RA 1..432 450..19 2160 100 Minus
CG14457-PB 816 CG14457-RB 382..813 450..19 2160 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1221 454..19 2165 99.8 Minus
CG14457-RB 1298 CG14457-RB 789..1224 454..19 2165 99.8 Minus
CG14457-RA 1557 CG14457-RA 1048..1483 454..19 2165 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:39:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 454..216 1180 99.6 Minus
3L 28110227 3L 22679763..22679960 216..19 990 100 Minus
Blast to na_te.dros performed on 2015-01-30 18:39:58 has no hits.

BO15303.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:52 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PA 1..435 16..450 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:55 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PB 378..816 16..454 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:00:47 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 19..454 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:13:49 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 19..454 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:13:49 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 22679463..22679701 216..454 99 -> Minus
3L 22679764..22679960 19..215 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:00:47 Download gff for BO15303.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672563..22672801 216..454 99 -> Minus
arm_3L 22672864..22673060 19..215 100   Minus

BO15303.5prime Sequence

464 bp (463 high quality bases) assembled on 2006-06-16

> BO15303.5prime
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAAGC
AAGCTTTCTAGACC

BO15303.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 435 CG14457-RA 1..432 17..448 2160 100 Plus
CG14457-PB 816 CG14457-RB 382..813 17..448 2160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1221 13..448 2165 99.8 Plus
CG14457-RB 1298 CG14457-RB 789..1224 13..448 2165 99.8 Plus
CG14457-RA 1557 CG14457-RA 1048..1483 13..448 2165 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 13..251 1180 99.6 Plus
3L 28110227 3L 22679763..22679960 251..448 990 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:51:49 has no hits.

BO15303.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:53 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PA 1..435 17..451 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:57 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-PB 378..816 13..451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 23:29:41 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 13..448 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:33 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 13..448 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:33 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22679463..22679701 13..251 99 -> Plus
3L 22679764..22679960 252..448 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 23:29:41 Download gff for BO15303.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672563..22672801 13..251 99 -> Plus
arm_3L 22672864..22673060 252..448 100   Plus

BO15303.complete Sequence

466 bp (466 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633398

> BO15303.complete
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAAGC
AAGCTTTCTAGACCAT

BO15303.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 813 CG14457-PC 375..810 13..448 2165 99.8 Plus
CG14457-RB 816 CG14457-PB 378..813 13..448 2165 99.8 Plus
CG14457-RA 435 CG14457-PA 1..432 17..448 2160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1221 13..448 2165 99.8 Plus
CG14457-RB 1298 CG14457-RB 789..1224 13..448 2165 99.8 Plus
CG14457-RA 1557 CG14457-RA 1048..1483 13..448 2165 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:04:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 13..251 1180 99.6 Plus
3L 28110227 3L 22679763..22679960 251..448 990 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:04:21 has no hits.

BO15303.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:27 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RB 378..816 13..451 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:47 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 13..448 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:39 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1052..1483 17..450 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:28 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 13..448 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:09:42 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1052..1483 17..450 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:09:42 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22679467..22679701 17..251 100 -> Plus
3L 22679764..22679960 252..450 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:39 Download gff for BO15303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672567..22672801 17..251 100 -> Plus
arm_3L 22672864..22673060 252..450 98   Plus

BO15303.pep Sequence

Translation from 16 to 466

> BO15303.pep
MKLQADYSLFGRILLIPLNGKGQVFLDAENMTVTMHTKTRLYSKGGFTFY
NVTNLHVDFKMDGLKSYFSNLFNGNKQLEDSTNKFFNDNWRMLADALYTV
ITQTIEDILLDVLKKIFHFIPANFFVSDIPTPEQLYGRAKPKPKASFLDH

BO15303.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-PA 144 CG14457-PA 1..144 1..144 757 100 Plus
CG14457-PC 270 CG14457-PC 127..270 1..144 757 100 Plus
CG14457-PB 271 CG14457-PB 128..271 1..144 757 100 Plus
CG14259-PA 289 CG14259-PA 143..280 1..137 404 52.9 Plus
CG17189-PA 264 CG17189-PA 120..258 1..138 373 48.9 Plus