Clone Sequence Records
BO15303.3prime Sequence
464 bp (463 high quality bases) assembled on 2006-06-16
> BO15303.3prime
ATGGTCTAGAAAGCTTGCTTTCGGTTTCGGCTTGGCTCTTCCATAAAGCT
GTTCCGGCGTCGGGATGTCGCTCACAAAGAAGTTGGCTGGAATGAAGTGA
AATATCTTCTTCAGCACATCCAGCAGAATGTCCTCGATGGTCTGGGTGAT
GACCGTGTACAGGGCATCGGCCAGCATCCGCCAGTTGTCGTTGAAGAACT
TGTTGGTGCTGTCCTCCAGCTGCTTATTGCCATTAAACAGATTGGAGAAG
TACGACTTGAGCCCGTCCATTTTAAAATCCACGTGCAGGTTGGTCACGTT
GTAGAAAGTGAACCCACCCTTGGAGTAGAGCCGAGTCTTCGTGTGCATGG
TGACCGTCATGTTCTCCGCGTCCAGGAACACCTGGCCCTTTCCGTTGAGC
GGGATGAGCAGGATCCGACCGAAAAGACTGTAGTCCGCCTGGAGCTTCAT
GTCGACTGATAACT
BO15303.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 435 | CG14457-RA | 1..432 | 450..19 | 2160 | 100 | Minus |
CG14457-PB | 816 | CG14457-RB | 382..813 | 450..19 | 2160 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:40:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1221 | 454..19 | 2165 | 99.8 | Minus |
CG14457-RB | 1298 | CG14457-RB | 789..1224 | 454..19 | 2165 | 99.8 | Minus |
CG14457-RA | 1557 | CG14457-RA | 1048..1483 | 454..19 | 2165 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:39:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 454..216 | 1180 | 99.6 | Minus |
3L | 28110227 | 3L | 22679763..22679960 | 216..19 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:39:58 has no hits.
BO15303.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:52 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PA | 1..435 | 16..450 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:55 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PB | 378..816 | 16..454 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:00:47 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 19..454 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:13:49 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 19..454 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:13:49 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679463..22679701 | 216..454 | 99 | -> | Minus |
3L | 22679764..22679960 | 19..215 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:00:47 Download gff for
BO15303.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672563..22672801 | 216..454 | 99 | -> | Minus |
arm_3L | 22672864..22673060 | 19..215 | 100 | | Minus |
BO15303.5prime Sequence
464 bp (463 high quality bases) assembled on 2006-06-16
> BO15303.5prime
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAAGC
AAGCTTTCTAGACC
BO15303.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 435 | CG14457-RA | 1..432 | 17..448 | 2160 | 100 | Plus |
CG14457-PB | 816 | CG14457-RB | 382..813 | 17..448 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1221 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RB | 1298 | CG14457-RB | 789..1224 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RA | 1557 | CG14457-RA | 1048..1483 | 13..448 | 2165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 13..251 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 22679763..22679960 | 251..448 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:51:49 has no hits.
BO15303.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:53 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PA | 1..435 | 17..451 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:46:57 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-PB | 378..816 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 23:29:41 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 13..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:33 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 13..448 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:33 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679463..22679701 | 13..251 | 99 | -> | Plus |
3L | 22679764..22679960 | 252..448 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 23:29:41 Download gff for
BO15303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672563..22672801 | 13..251 | 99 | -> | Plus |
arm_3L | 22672864..22673060 | 252..448 | 100 | | Plus |
BO15303.complete Sequence
466 bp (466 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633398
> BO15303.complete
GAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAGTCTTTTCGGTC
GGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGTTCCTGGACGCG
GAGAACATGACGGTCACCATGCACACGAAGACTCGGCTCTACTCCAAGGG
TGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGATTTTAAAATGG
ACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCAATAAGCAGCTG
GAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGGATGCTGGCCGA
TGCCCTGTACACGGTCATCACCCAGACCATCGAGGACATTCTGCTGGATG
TGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCTTTGTGAGCGAC
ATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCGAAACCGAAAGC
AAGCTTTCTAGACCAT
BO15303.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 813 | CG14457-PC | 375..810 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RB | 816 | CG14457-PB | 378..813 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RA | 435 | CG14457-PA | 1..432 | 17..448 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1221 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RB | 1298 | CG14457-RB | 789..1224 | 13..448 | 2165 | 99.8 | Plus |
CG14457-RA | 1557 | CG14457-RA | 1048..1483 | 13..448 | 2165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:04:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 13..251 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 22679763..22679960 | 251..448 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:04:21 has no hits.
BO15303.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:27 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RB | 378..816 | 13..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:47 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 13..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:39 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1052..1483 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:28 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 13..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:09:42 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1052..1483 | 17..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:09:42 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679467..22679701 | 17..251 | 100 | -> | Plus |
3L | 22679764..22679960 | 252..450 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:39 Download gff for
BO15303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672567..22672801 | 17..251 | 100 | -> | Plus |
arm_3L | 22672864..22673060 | 252..450 | 98 | | Plus |
BO15303.pep Sequence
Translation from 16 to 466
> BO15303.pep
MKLQADYSLFGRILLIPLNGKGQVFLDAENMTVTMHTKTRLYSKGGFTFY
NVTNLHVDFKMDGLKSYFSNLFNGNKQLEDSTNKFFNDNWRMLADALYTV
ITQTIEDILLDVLKKIFHFIPANFFVSDIPTPEQLYGRAKPKPKASFLDH
BO15303.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-PA | 144 | CG14457-PA | 1..144 | 1..144 | 757 | 100 | Plus |
CG14457-PC | 270 | CG14457-PC | 127..270 | 1..144 | 757 | 100 | Plus |
CG14457-PB | 271 | CG14457-PB | 128..271 | 1..144 | 757 | 100 | Plus |
CG14259-PA | 289 | CG14259-PA | 143..280 | 1..137 | 404 | 52.9 | Plus |
CG17189-PA | 264 | CG17189-PA | 120..258 | 1..138 | 373 | 48.9 | Plus |