Clone Sequence Records
BO15307.3prime Sequence
389 bp (388 high quality bases) assembled on 2006-06-16
> BO15307.3prime
ATGGTCTAGAAAGCTTGCCGAAGTGCATGGGTTTACTTTAGTAGTATGGA
TTTCCATTGCCCCGCGACTGATAAGCTTGACCTTCTGGGCCGCCAAGGCC
GGGCAATGTATTATAGTAGTCGCCTTGCCCACTGCTCCGCTGTAAAGCCC
GTTGCGAGAGTTCATCTCACGAAGCATTTTTGTGTATCGCAAGGGACTGC
GATAGCCAGGACCACCAAGCGATGCAGATGCACCATTAAAATTTGAAGAA
CCTTGTCCGCAATTACTCTGCTGCTGGCTATATCCATGGCCACTGCTCGT
TTGGTTGTACAGCATTTCAAAGCCCTCGCCACCTTGGCTATAACCATCGT
ATTGCATACCATTTCCGTATTCCATGTCGACTGATAACT
BO15307.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-PB | 360 | CG15219-RB | 1..357 | 375..19 | 1785 | 100 | Minus |
| CG15219-PA | 354 | CG15219-RA | 1..234 | 375..142 | 1170 | 100 | Minus |
| CG15219-PA | 354 | CG15219-RA | 250..354 | 142..38 | 525 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:49:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RC | 505 | CG15219-RC | 111..468 | 376..19 | 1790 | 100 | Minus |
| CG15219-RA | 521 | CG15219-RA | 111..484 | 376..19 | 1620 | 95.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22105116..22105299 | 143..326 | 920 | 100 | Plus |
| 2L | 23513712 | 2L | 22104928..22105051 | 19..142 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 22105350..22105402 | 324..376 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:49:32 has no hits.
BO15307.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:44:56 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-PB | 1..360 | 18..375 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:01 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-PB | 1..360 | 18..375 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:46:43 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 101..468 | 19..389 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:50:34 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 101..468 | 19..389 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:50:34 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22104928..22105051 | 19..142 | 100 | <- | Plus |
| 2L | 22105116..22105297 | 143..324 | 100 | <- | Plus |
| 2L | 22105351..22105411 | 325..389 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:46:43 Download gff for
BO15307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22104928..22105051 | 19..142 | 100 | <- | Plus |
| arm_2L | 22105116..22105297 | 143..324 | 100 | <- | Plus |
| arm_2L | 22105351..22105411 | 325..389 | 92 | | Plus |
BO15307.5prime Sequence
389 bp (389 high quality bases) assembled on 2006-06-16
> BO15307.5prime
GAAGTTATCAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGTGGTCCTGGCTATCGCAGTCCCT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
AGCGGAGCAGTGGGCAAGGCGACTACTATAATACATTGCCCGGCCTTGGC
GGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCAATGGAAATCCATACTA
CTAAAGTAAACCCATGCACTTCGGCAAGCTTTCTAGACC
BO15307.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:21:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-PB | 360 | CG15219-RB | 1..357 | 17..373 | 1785 | 100 | Plus |
| CG15219-PA | 354 | CG15219-RA | 1..234 | 17..250 | 1170 | 100 | Plus |
| CG15219-PA | 354 | CG15219-RA | 250..354 | 250..354 | 525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RC | 505 | CG15219-RC | 111..468 | 16..373 | 1790 | 100 | Plus |
| CG15219-RA | 521 | CG15219-RA | 111..484 | 16..373 | 1620 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22105116..22105299 | 249..66 | 920 | 100 | Minus |
| 2L | 23513712 | 2L | 22104928..22105051 | 373..250 | 620 | 100 | Minus |
| 2L | 23513712 | 2L | 22105350..22105402 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 14:38:15 has no hits.
BO15307.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:43:19 Download gff for
BO15307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-PB | 1..360 | 17..374 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:53:08 Download gff for
BO15307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 100..468 | 2..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 15:23:12 Download gff for
BO15307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 100..468 | 2..373 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 15:23:12 Download gff for
BO15307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22104928..22105051 | 250..373 | 100 | <- | Minus |
| 2L | 22105116..22105297 | 68..249 | 100 | <- | Minus |
| 2L | 22105351..22105412 | 2..67 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:53:08 Download gff for
BO15307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22104928..22105051 | 250..373 | 100 | <- | Minus |
| arm_2L | 22105116..22105297 | 68..249 | 100 | <- | Minus |
| arm_2L | 22105351..22105412 | 2..67 | 92 | | Minus |
BO15307.complete Sequence
391 bp assembled on 2008-08-15
> BO15307.complete
GAAGTTATCAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGTGGTCCTGGCTATCGCAGTCCCT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
AGCGGAGCAGTGGGCAAGGCGACTACTATAATACATTGCCCGGCCTTGGC
GGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCAATGGAAATCCATACTA
CTAAAGTAAACCCATGCACTTCGGCAAGCTTTCTAGACCAT
BO15307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:56:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RC | 360 | CG15219-PC | 1..357 | 17..373 | 1785 | 100 | Plus |
| CG15219-RA | 354 | CG15219-PA | 1..354 | 17..354 | 1495 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RC | 505 | CG15219-RC | 111..468 | 16..373 | 1790 | 100 | Plus |
| CG15219-RA | 521 | CG15219-RA | 111..484 | 16..373 | 1595 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22105116..22105299 | 249..66 | 920 | 100 | Minus |
| 2L | 23513712 | 2L | 22104928..22105051 | 373..250 | 620 | 100 | Minus |
| 2L | 23513712 | 2L | 22105350..22105402 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:56:21 has no hits.
BO15307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:35:59 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 94..338 | 2..249 | 97 | <- | Plus |
| CG15219-RA | 353..478 | 250..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:27:39 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 112..468 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:09:53 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 106..338 | 17..249 | 100 | <- | Plus |
| CG15219-RA | 353..478 | 250..375 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:40 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RC | 112..468 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:40 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22104926..22105051 | 250..375 | 98 | <- | Minus |
| 2L | 22105116..22105297 | 68..249 | 100 | <- | Minus |
| 2L | 22105351..22105401 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:27:39 Download gff for
BO15307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22104926..22105051 | 250..375 | 98 | <- | Minus |
| arm_2L | 22105116..22105297 | 68..249 | 100 | <- | Minus |
| arm_2L | 22105351..22105401 | 17..67 | 100 | | Minus |
BO15307.pep Sequence
Translation from 16 to 391
> BO15307.pep
MEYGNGMQYDGYSQGGEGFEMLYNQTSSGHGYSQQQSNCGQGSSNFNGAS
ASLGGPGYRSPLRYTKMLREMNSRNGLYSGAVGKATTIIHCPALAAQKVK
LISRGAMEIHTTKVNPCTSASFLDH
BO15307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-PC | 119 | CG15219-PC | 1..119 | 1..119 | 633 | 100 | Plus |
| CG15219-PA | 117 | CG15219-PA | 1..79 | 1..79 | 428 | 100 | Plus |
