Clone BO15318 Report

Search the DGRC for BO15318

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG4025-RA
Protein status:BO15318.pep: validated full length
Sequenced Size:772

Clone Sequence Records

BO15318.3prime Sequence

770 bp (769 high quality bases) assembled on 2006-06-16

> BO15318.3prime
ATGGTCTAGAAAGCTTGCGATGGTGGTCGAATAGGACATCAGGGCAATCT
GGGGATGCGACAGCGACACGTCGCGGAACTCATTCGTGAAGGAGAGGATA
AAGAAGCTGAAGACGGTGGCGATGACCCACTCTGAAATAGAGCTGACCAC
GTGGAAGTACCAGCCGCCGTCCGAGGGATACCACTTTCGAGGATTCTGTC
CTTTGAAGAGGATGTGCGACATCACGCCGGTGACCGCCAGCAGGATGAAC
AGGATCGTGCAGACAACGGACATGCCCAGCCGCAAGTGAGCGTTAATGCG
GGTACCCGACATGGGGAAGATCAGATACGAGATGAGCGCCTGCATCCAAA
AGTACAAGGTGCCGCAGCCGAAGCAGCAGAAGGCTCCGATGAAGTGGACA
ATCCGCACGTTCGTCTCCTGAAAGTTGCCCACGAAGCTAATGCCCAGGCA
GGACACCAGTCCGAACCACAAGGCTAGTCGGTTCTGGCGCAGCACCGACC
CGTCCAAATCCGGATGGTGTTCATAAAGCTGCAGCACCTGACGGTAGCGT
ACGTAGATGGTAATTCCAAGCAGAACGCTGCCTATGTTGATAAGCTGCCC
GAACACACAGCTTTCCGGCGAGTAGGTGGCCGCATCGCTGATGTAGGGAA
CCGTGGGCACCACATGCCCCTCCAGCACGGCGAAGATGTACGTGCCAAGA
AAGGTGACCTGGAATATCAGGAACGTGAGCACCGGCAGCAAGTAAACCTG
TGACATGTCGACTGATAACT

BO15318.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-PA 741 CG4025-RA 1..738 756..19 3690 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:13:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-RA 1240 CG4025-RA 118..855 756..19 3690 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2077452..2077841 569..180 1950 100 Minus
X 23542271 X 2077907..2078070 182..19 820 100 Minus
X 23542271 X 2077218..2077339 691..570 610 100 Minus
X 23542271 X 2077083..2077150 756..689 340 100 Minus
Blast to na_te.dros performed on 2015-02-12 18:13:32 has no hits.

BO15318.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:10 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-PA 1..741 18..756 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:20 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-PA 1..741 18..756 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:49:56 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 112..863 11..763 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:05:51 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 112..863 11..763 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:05:51 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2077077..2077147 692..763 95 -> Minus
X 2077218..2077339 570..691 100 -> Minus
X 2077452..2077839 182..569 100 -> Minus
X 2077908..2078078 11..181 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:56 Download gff for BO15318.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1971110..1971180 692..763 95 -> Minus
arm_X 1971251..1971372 570..691 100 -> Minus
arm_X 1971485..1971872 182..569 100 -> Minus
arm_X 1971941..1972111 11..181 98   Minus

BO15318.5prime Sequence

770 bp (769 high quality bases) assembled on 2006-06-16

> BO15318.5prime
GAAGTTATCAGTCGACATGTCACAGGTTTACTTGCTGCCGGTGCTCACGT
TCCTGATATTCCAGGTCACCTTTCTTGGCACGTACATCTTCGCCGTGCTG
GAGGGGCATGTGGTGCCCACGGTTCCCTACATCAGCGATGCGGCCACCTA
CTCGCCGGAAAGCTGTGTGTTCGGGCAGCTTATCAACATAGGCAGCGTTC
TGCTTGGAATTACCATCTACGTACGCTACCGTCAGGTGCTGCAGCTTTAT
GAACACCATCCGGATTTGGACGGGTCGGTGCTGCGCCAGAACCGACTAGC
CTTGTGGTTCGGACTGGTGTCCTGCCTGGGCATTAGCTTCGTGGGCAACT
TTCAGGAGACGAACGTGCGGATTGTCCACTTCATCGGAGCCTTCTGCTGC
TTCGGCTGCGGCACCTTGTACTTTTGGATGCAGGCGCTCATCTCGTATCT
GATCTTCCCCATGTCGGGTACCCGCATTAACGCTCACTTGCGGCTGGGCA
TGTCCGTTGTCTGCACGATCCTGTTCATCCTGCTGGCGGTCACCGGCGTG
ATGTCGCACATCCTCTTCAAAGGACAGAATCCTCGAAAGTGGTATCCCTC
GGACGGCGGCTGGTACTTCCACGTGGTCAGCTCTATTTCAGAGTGGGTCA
TCGCCACCGTCTTCAGCTTCTTTATCCTCTCCTTCACGAATGAGTTCCGC
GACGTGTCGCTGTCGCATCCCCAGATTGCCCTGATGTCCTATTCGACCAC
CATCGCAAGCTTTCTAGACC

BO15318.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-PA 741 CG4025-RA 1..738 17..754 3690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-RA 1240 CG4025-RA 118..855 17..754 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2077452..2077841 204..593 1950 100 Plus
X 23542271 X 2077907..2078070 591..754 820 100 Plus
X 23542271 X 2077218..2077339 82..203 610 100 Plus
X 23542271 X 2077083..2077150 17..84 340 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:45:45 has no hits.

BO15318.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:11 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-PA 1..741 17..755 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:21 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-PA 1..741 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:10:58 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 112..863 10..762 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:32:01 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 112..863 10..762 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:32:01 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2077077..2077147 10..81 95 -> Plus
X 2077218..2077339 82..203 100 -> Plus
X 2077452..2077839 204..591 100 -> Plus
X 2077908..2078078 592..762 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:10:58 Download gff for BO15318.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1971251..1971372 82..203 100 -> Plus
arm_X 1971110..1971180 10..81 95 -> Plus
arm_X 1971485..1971872 204..591 100 -> Plus
arm_X 1971941..1972111 592..762 98   Plus

BO15318.complete Sequence

772 bp (772 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633405

> BO15318.complete
GAAGTTATCAGTCGACATGTCACAGGTTTACTTGCTGCCGGTGCTCACGT
TCCTGATATTCCAGGTCACCTTTCTTGGCACGTACATCTTCGCCGTGCTG
GAGGGGCATGTGGTGCCCACGGTTCCCTACATCAGCGATGCGGCCACCTA
CTCGCCGGAAAGCTGTGTGTTCGGGCAGCTTATCAACATAGGCAGCGTTC
TGCTTGGAATTACCATCTACGTACGCTACCGTCAGGTGCTGCAGCTTTAT
GAACACCATCCGGATTTGGACGGGTCGGTGCTGCGCCAGAACCGACTAGC
CTTGTGGTTCGGACTGGTGTCCTGCCTGGGCATTAGCTTCGTGGGCAACT
TTCAGGAGACGAACGTGCGGATTGTCCACTTCATCGGAGCCTTCTGCTGC
TTCGGCTGCGGCACCTTGTACTTTTGGATGCAGGCGCTCATCTCGTATCT
GATCTTCCCCATGTCGGGTACCCGCATTAACGCTCACTTGCGGCTGGGCA
TGTCCGTTGTCTGCACGATCCTGTTCATCCTGCTGGCGGTCACCGGCGTG
ATGTCGCACATCCTCTTCAAAGGACAGAATCCTCGAAAGTGGTATCCCTC
GGACGGCGGCTGGTACTTCCACGTGGTCAGCTCTATTTCAGAGTGGGTCA
TCGCCACCGTCTTCAGCTTCTTTATCCTCTCCTTCACGAATGAGTTCCGC
GACGTGTCGCTGTCGCATCCCCAGATTGCCCTGATGTCCTATTCGACCAC
CATCGCAAGCTTTCTAGACCAT

BO15318.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:15:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-RA 741 CG4025-PA 1..738 17..754 3690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-RA 1240 CG4025-RA 118..855 17..754 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2077452..2077841 204..593 1950 100 Plus
X 23542271 X 2077907..2078070 591..754 820 100 Plus
X 23542271 X 2077218..2077339 82..203 610 100 Plus
X 23542271 X 2077083..2077150 17..84 340 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:15:20 has no hits.

BO15318.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:15:44 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 1..741 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:55 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 96..847 10..762 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:34 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 118..855 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:15:44 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 96..847 10..762 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:06 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
CG4025-RA 118..855 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:06 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
X 2077083..2077147 17..81 100 -> Plus
X 2077218..2077339 82..203 100 -> Plus
X 2077452..2077839 204..591 100 -> Plus
X 2077908..2078070 592..756 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:34 Download gff for BO15318.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1971116..1971180 17..81 100 -> Plus
arm_X 1971251..1971372 82..203 100 -> Plus
arm_X 1971485..1971872 204..591 100 -> Plus
arm_X 1971941..1972103 592..756 98   Plus

BO15318.pep Sequence

Translation from 16 to 772

> BO15318.pep
MSQVYLLPVLTFLIFQVTFLGTYIFAVLEGHVVPTVPYISDAATYSPESC
VFGQLINIGSVLLGITIYVRYRQVLQLYEHHPDLDGSVLRQNRLALWFGL
VSCLGISFVGNFQETNVRIVHFIGAFCCFGCGTLYFWMQALISYLIFPMS
GTRINAHLRLGMSVVCTILFILLAVTGVMSHILFKGQNPRKWYPSDGGWY
FHVVSSISEWVIATVFSFFILSFTNEFRDVSLSHPQIALMSYSTTIASFL
DH

BO15318.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4025-PA 246 CG4025-PA 1..246 1..246 1294 100 Plus