Clone BO15320 Report

Search the DGRC for BO15320

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG3292-RA
Protein status:BO15320.pep: validated full length
Sequenced Size:1663

Clone Sequence Records

BO15320.3prime Sequence

902 bp (770 high quality bases) assembled on 2006-06-16

> BO15320.3prime
ATGGTCTAGAAAGCTTGCGTCCTCATTGTCACAGAGAGTGGGTCCATTGC
CAATGCAGGAGGCATAGGCCATCAGGTGGGGAATGGTGCTCTGCTGCATC
ACGCCGGTGAAGAGATGACTTTGCGGACCAGTAGCGAAGATTCCCACATC
ATCGCCAGCATGAACGCCAATAGTGCCGTGGATGTAGCTGGGGTGGATGA
AGTCTTCCGCTCCAATTTGATCCGTAAGATCGATGCGCTGGCCGTGCTCA
TCCAGATACTGATTGGTTCCCACTGCATAGTTGAGAGTGGCGTACTTAAC
TCCATTCACATCGGTGTCATCCTGATTGAGACCCAAAATGGGGGTTCCTC
TGCCAGGATAACCAGAGATGGTCAATGGATGGGCGTGATCGGAGGTGACT
ACAATCAGGGTCTCTTCGGGATCGGTTATATCCAGAGCCTCCTGAACAGC
CTGCTCGAACTGAAGCGTCTCTGAGAGCGAATAGGTTGGGGAGTTGAAGT
GGTTGCCATAATCGATGAGTCCACCCTCGACGAACAGAAAGTAGCCACCA
TCGCGTTTGCTGACCACCTCGATTGCTTTGCGCGTCATTTCCGCCAGTGT
GGGCTCCTCCTTGGGATCGGCCATCTTATTGAAGCTCATCACTCCCGAGC
GGAAGGTACCAATCAGGTTGGTGATCTTCGAGACATTCACGCTCAGCAGC
TGGTTACGATTGTAGGCTAAAACACCGCCGGGATGCAGTCCCTGCCAGCG
AGACAGCAGGTTTACTCCGTCGGAACGCTCGCCCTTCTTGTTGAACGGAT
CCGTGATCGTGTTGGGCAGGAACTTGCCAATTCCGCCGCCCAGCATCACA
TCGAAGTTCTTGCCGGGAGCCTGGGTATCAGTTGGGTGCCAATGTCCGTG
CA

BO15320.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 1632 CG3292-RA 771..1629 877..19 4295 100 Minus
CG3290-PA 1617 CG3290-RA 1513..1565 111..59 215 96.2 Minus
CG3264-PA 1602 CG3264-RA 1504..1562 120..62 195 93.2 Minus
CG3290-PA 1617 CG3290-RA 1358..1391 266..233 145 97 Minus
CG3264-PA 1602 CG3264-RA 754..810 867..811 135 89.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 788..1672 902..19 4385 99.8 Minus
CG3264-RB 2182 CG3264-RB 1306..1616 360..50 470 77.7 Minus
CG3264-RA 1737 CG3264-RA 1306..1616 360..50 470 77.7 Minus
CG3264-RB 2182 CG3264-RB 766..926 896..737 255 77.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22203985..22204684 204..902 3435 99.7 Plus
2R 25286936 2R 22203735..22203921 19..205 935 100 Plus
2R 25286936 2R 22209030..22209340 50..360 460 76.5 Plus
2R 25286936 2R 22206168..22206532 43..407 355 73.2 Plus
2R 25286936 2R 22209778..22209917 737..876 250 78.6 Plus
2R 25286936 2R 22207006..22207070 812..876 205 87.7 Plus
Blast to na_te.dros performed on 2015-02-10 22:16:54 has no hits.

BO15320.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:12 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 746..1632 18..901 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:22 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 746..1632 18..901 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:44:41 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 789..1672 19..901 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:00:12 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 789..1672 19..901 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:00:12 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22203735..22203919 19..203 100 <- Plus
2R 22203985..22204683 204..901 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:44:41 Download gff for BO15320.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18091240..18091424 19..203 100 <- Plus
arm_2R 18091490..18092188 204..901 99   Plus

BO15320.5prime Sequence

870 bp (785 high quality bases) assembled on 2006-06-16

> BO15320.5prime
GAAGTTATCAGTCGACATGAAGACTTTCGTAGCCATTAGCCTGGTGTTAT
GCACCCTGGTGGCCACCTCCTTGGCTGCTTCCATAGACATGCCCGAGATC
CATAATCAGTTCCAGCTGGTGGGAGGATCGGTGAGCACAGCAAAAACCCG
CGAAGGAAACCTTATCGACCCAAATGCCATGGCCAAGGGAAAACCCGGAC
CAGAGGAGGAGAAGAACGCGCAGTTCTGGTACGATCTTGCCTACGAGGAG
ATCGCCAAGCGCCTGGAACAGCCACAATTGGACAAGAGGAAGGCCAAGAA
TGTTATCCTGTTCCTCGGCGATGGCATGTCCCTGTCCACGGTGGCAGCCG
CCCGCATCCACAAGGGTCAGCTTAAGGGCAATACCGGCGAGGAGGACTCC
CTGAGCTTCGAGAAGTTCCCCTACACCGGCCTGAGCAGGACATACTGCTC
CAATGCCCAGGTTCCCGACTCCGCCTGCACTGCCACCGCTTACTTGTGCG
GTGTGAAGACTAATATCGTGGCTTTGGGAATTACGGCGGCAGTGAGCTTC
AACAACTGCAGCGGCAGCGAGGATCCGGCCAATCAGGTGGACTCCATCGC
AGCCTGGGCCCAGGCTGCTGGAAAGGCCACTGGCATTGTGACCACCACCA
CTCTGACCCACGCCAGTCCATCAGGTGCATATGCCAAGACCACCAACCGA
TTCTTCGAGAGCGACACGGATATTCTGACCTACGGCGAGGGACAGAACGA
TCCGGCCACCTGCACGGACATTGCCACCCAACTGATTACCCAGGCTCCCG
GCAAGAACTTCGATGTGATGCTGGGCGGCGGAATTGGCAAGTTCCTGCCC
AACACGATCACGGATCCGTT

BO15320.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 1632 CG3292-RA 1..854 17..870 4270 100 Plus
CG3264-PA 1602 CG3264-RA 382..467 416..501 230 90.6 Plus
CG3264-PA 1602 CG3264-RA 571..656 605..690 205 89.5 Plus
CG3290-PA 1617 CG3290-RA 605..659 636..690 150 90.9 Plus
CG3264-PA 1602 CG3264-RA 754..810 797..853 135 89.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:46:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 44..897 17..870 4270 100 Plus
CG3264-RB 2182 CG3264-RB 297..852 289..853 910 77.9 Plus
CG3264-RA 1737 CG3264-RA 297..852 289..853 910 77.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22204575..22205006 870..439 2160 100 Minus
2R 25286936 2R 22205070..22205419 439..90 1750 100 Minus
2R 25286936 2R 22209852..22210257 853..439 615 77.1 Minus
2R 25286936 2R 22207006..22207410 852..439 505 75.4 Minus
2R 25286936 2R 22205478..22205550 89..17 365 100 Minus
2R 25286936 2R 22210319..22210469 439..289 260 78.1 Minus
X 23542271 X 15588110..15588204 416..510 190 80 Plus
Blast to na_te.dros performed on 2015-02-09 22:46:19 has no hits.

BO15320.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:13 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 1..854 17..870 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:24 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-PA 1..854 17..870 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:18 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..897 17..870 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:48:29 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..897 17..870 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:48:29 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22204575..22205005 440..870 100 <- Minus
2R 22205070..22205419 90..439 100 <- Minus
2R 22205478..22205550 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:18 Download gff for BO15320.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18092080..18092510 440..870 100 <- Minus
arm_2R 18092575..18092924 90..439 100 <- Minus
arm_2R 18092983..18093055 17..89 100   Minus

BO15320.complete Sequence

1663 bp (1663 high quality bases) assembled on 2006-08-21

GenBank Submission: FJ633406

> BO15320.complete
GAAGTTATCAGTCGACATGAAGACTTTCGTAGCCATTAGCCTGGTGTTAT
GCACCCTGGTGGCCACCTCCTTGGCTGCTTCCATAGACATGCCCGAGATC
CATAATCAGTTCCAGCTGGTGGGAGGATCGGTGAGCACAGCAAAAACCCG
CGAAGGAAACCTTATCGACCCAAATGCCATGGCCAAGGGAAAACCCGGAC
CAGAGGAGGAGAAGAACGCGCAGTTCTGGTACGATCTTGCCTACGAGGAG
ATCGCCAAGCGCCTGGAACAGCCACAATTGGACAAGAGGAAGGCCAAGAA
TGTTATCCTGTTCCTCGGCGATGGCATGTCCCTGTCCACGGTGGCAGCCG
CCCGCATCCACAAGGGTCAGCTTAAGGGCAATACCGGCGAGGAGGACTCC
CTGAGCTTCGAGAAGTTCCCCTACACCGGCCTGAGCAGGACATACTGCTC
CAATGCCCAGGTTCCCGACTCCGCCTGCACTGCCACCGCTTACTTGTGCG
GTGTGAAGACTAATATCGTGGCTTTGGGAATTACGGCGGCAGTGAGCTTC
AACAACTGCAGCGGCAGCGAGGATCCGGCCAATCAGGTGGACTCCATCGC
AGCCTGGGCCCAGGCTGCTGGAAAGGCCACTGGCATTGTGACCACCACCA
CTCTGACCCACGCCAGTCCATCAGGTGCATATGCCAAGACCACCAACCGA
TTCTTCGAGAGCGACACGGATATTCTGACCTACGGCGAGGGACAGAACGA
TCCGGCCACCTGCACGGACATTGCCACCCAACTGATTACCCAGGCTCCCG
GCAAGAACTTCGATGTGATGCTGGGCGGCGGAATTGGCAAGTTCCTGCCC
AACACGATCACGGATCCGTTCAACAAGAAGGGCGAGCGTTCCGACGGAGT
AAACCTGCTGTCTCGCTGGCAGGGACTGCATCCCGGCGGTGTTTTAGCCT
ACAATCGTAACCAGCTGCTGAGCGTGAATGTCTCGAAGATCACCAACCTG
ATTGGTACCTTCCGCTCGGGAGTGATGAGCTTCAATAAGATGGCCGATCC
CAAGGAGGAGCCCACACTGGCGGAAATGACGCGCAAAGCAATCGAGGTGG
TCAGCAAACGCGATGGTGGCTACTTTCTGTTCGTCGAGGGTGGACTCATC
GATTATGGCAACCACTTCAACTCCCCAACCTATTCGCTCTCAGAGACGCT
TCAGTTCGAGCAGGCTGTTCAGGAGGCTCTGGATATAACCGATCCCGAAG
AGACCCTGATTGTAGTCACCTCCGATCACGCCCATCCATTGACCATCTCT
GGTTATCCTGGCAGAGGAACCCCCATTTTGGGTCTCAATCAGGATGACAC
CGATGTGAATGGAGTTAAGTACGCCACTCTCAACTATGCAGTGGGAACCA
ATCAGTATCTGGATGAGCACGGCCAGCGCATCGATCTTACGGATCAAATT
GGAGCGGAAGACTTCATCCACCCCAGCTACATCCACGGCACTATTGGCGT
TCATGCTGGCGATGATGTGGGAATCTTCGCTACTGGTCCGCAAAGTCATC
TCTTCACCGGCGTGATGCAGCAGAGCACCATTCCCCACCTGATGGCCTAT
GCCTCCTGCATTGGCAATGGACCCACTCTCTGTGACAATGAGGACGCAAG
CTTTCTAGACCAT

BO15320.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1632 CG3292-PA 1..1629 17..1645 8145 100 Plus
CG3264-RB 1602 CG3264-PB 255..884 289..927 910 76.5 Plus
CG3264-RA 1602 CG3264-PA 255..884 289..927 910 76.5 Plus
CG3264-RB 1602 CG3264-PB 1264..1574 1304..1614 460 76.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-RA 1713 CG3292-RA 44..1672 17..1645 8145 100 Plus
CG3264-RB 2182 CG3264-RB 297..926 289..927 910 76.5 Plus
CG3264-RA 1737 CG3264-RA 297..926 289..927 910 76.5 Plus
CG3264-RB 2182 CG3264-RB 1306..1616 1304..1614 460 76.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22203985..22205006 1460..439 5110 100 Minus
2R 25286936 2R 22205070..22205419 439..90 1750 100 Minus
2R 25286936 2R 22203735..22203921 1645..1459 935 100 Minus
2R 25286936 2R 22209778..22210257 927..439 655 76.1 Minus
2R 25286936 2R 22207006..22207410 852..439 505 75.4 Minus
2R 25286936 2R 22209030..22209340 1614..1304 460 76.5 Minus
2R 25286936 2R 22205478..22205550 89..17 365 100 Minus
2R 25286936 2R 22206168..22206532 1621..1257 355 73.2 Minus
2R 25286936 2R 22210319..22210469 439..289 260 78.1 Minus
X 23542271 X 15588110..15588204 416..510 190 80 Plus
Blast to na_te.dros performed on 2014-11-28 00:55:17 has no hits.

BO15320.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:53:57 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 1..1632 17..1646 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:10:10 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 27..1655 17..1645 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:34:17 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..1672 17..1647 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:53:57 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 27..1655 17..1645 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:30 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
CG3292-RA 44..1672 17..1647 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:30 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22203733..22203919 1461..1647 98 <- Minus
2R 22203985..22205005 440..1460 100 <- Minus
2R 22205070..22205419 90..439 100 <- Minus
2R 22205478..22205550 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:34:17 Download gff for BO15320.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18091238..18091424 1461..1647 98 <- Minus
arm_2R 18091490..18092510 440..1460 100 <- Minus
arm_2R 18092575..18092924 90..439 100 <- Minus
arm_2R 18092983..18093055 17..89 100   Minus

BO15320.pep Sequence

Translation from 16 to 1663

> BO15320.pep
MKTFVAISLVLCTLVATSLAASIDMPEIHNQFQLVGGSVSTAKTREGNLI
DPNAMAKGKPGPEEEKNAQFWYDLAYEEIAKRLEQPQLDKRKAKNVILFL
GDGMSLSTVAAARIHKGQLKGNTGEEDSLSFEKFPYTGLSRTYCSNAQVP
DSACTATAYLCGVKTNIVALGITAAVSFNNCSGSEDPANQVDSIAAWAQA
AGKATGIVTTTTLTHASPSGAYAKTTNRFFESDTDILTYGEGQNDPATCT
DIATQLITQAPGKNFDVMLGGGIGKFLPNTITDPFNKKGERSDGVNLLSR
WQGLHPGGVLAYNRNQLLSVNVSKITNLIGTFRSGVMSFNKMADPKEEPT
LAEMTRKAIEVVSKRDGGYFLFVEGGLIDYGNHFNSPTYSLSETLQFEQA
VQEALDITDPEETLIVVTSDHAHPLTISGYPGRGTPILGLNQDDTDVNGV
KYATLNYAVGTNQYLDEHGQRIDLTDQIGAEDFIHPSYIHGTIGVHAGDD
VGIFATGPQSHLFTGVMQQSTIPHLMAYASCIGNGPTLCDNEDASFLDH

BO15320.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3292-PA 543 CG3292-PA 1..543 1..543 2833 100 Plus
CG3290-PA 538 CG3290-PA 12..531 7..539 1781 64 Plus
CG3264-PB 533 CG3264-PB 13..533 9..541 1772 63.7 Plus
CG3264-PA 533 CG3264-PA 13..533 9..541 1772 63.7 Plus
CG5656-PA 523 CG5656-PA 36..514 64..540 1102 47.3 Plus