Clone Sequence Records
BO15324.3prime Sequence
551 bp (550 high quality bases) assembled on 2006-06-16
> BO15324.3prime
ATGGTCTAGAAAGCTTGCTTCTTCAGTAGGTCGACGAGTCGTAGTTCTAG
TAGTTGGCGCACGACGACGTGTAGTTCTTCGAGTAGTTCTAGTTGTTGGA
GCACGACGACGTGTAGTTCTACGAGAAGATCTAGTAGTTGGAGCACGACG
GGTAGTTGGGGTCCTACGAGTAGTTCGAGGTCGTCGGGTGTCAGGAATTC
GCCGGGTTGTCCTCCTTGAAGTTGGAGGGCGAGCGGTGACCCCACCATCA
ATGCTGTTTCTCACATTTTTGCAGTTTATAACAGCACAACGCTCGAGTGT
CAATCGACAAGTAGCCAGAGACAATTCGCAACGAGAGACATTTCGCCAGT
TTCGAATGCCTGACTGGCGGCGGCAGTGATTATTAAATGTGGTCGAAACA
TCATTTTGAACTCCCAATCTCCGTTCATTTCGACGGCAAGTTTCGTTTTC
TTGACGGCAAATTTCTTGTTCACGAGTTTGAGCCTGAACAGCCACGCAAA
GGCAGAGAATAGCAAAAATGAGAGTAATTTTCGACATGTCGACTGATAAC
T
BO15324.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7608-PA | 522 | Eig71Ec-RA | 1..519 | 537..19 | 2595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:49:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ec-RA | 639 | CG7608-RA | 38..558 | 539..19 | 2605 | 100 | Minus |
Eig71Ec-RA | 639 | CG7608-RA | 427..494 | 108..41 | 250 | 91.2 | Minus |
Eig71Ec-RA | 639 | CG7608-RA | 469..536 | 150..83 | 250 | 91.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:49:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651560..15651843 | 19..302 | 1420 | 100 | Plus |
3L | 28110227 | 3L | 15651922..15652138 | 303..519 | 1070 | 99.5 | Plus |
3L | 28110227 | 3L | 15651624..15651691 | 41..108 | 250 | 91.2 | Plus |
3L | 28110227 | 3L | 15651582..15651649 | 83..150 | 250 | 91.2 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:49:09 has no hits.
BO15324.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:16 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7608-PA | 1..522 | 15..537 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:28 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7608-PA | 1..522 | 15..537 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:46:40 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 27..569 | 5..548 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:50:31 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 27..569 | 5..548 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:50:31 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15651549..15651843 | 5..302 | 98 | <- | Plus |
3L | 15651922..15652131 | 303..512 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:46:40 Download gff for
BO15324.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15644649..15644943 | 5..302 | 98 | <- | Plus |
arm_3L | 15645022..15645231 | 303..512 | 100 | <- | Plus |
BO15324.5prime Sequence
551 bp (550 high quality bases) assembled on 2006-05-29
> BO15324.5prime
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCTGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAAGCAAGCTTTCTAGAC
C
BO15324.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7608-PA | 522 | Eig71Ec-RA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:09:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ec-RA | 639 | CG7608-RA | 38..558 | 15..535 | 2605 | 100 | Plus |
Eig71Ec-RA | 639 | CG7608-RA | 427..494 | 446..513 | 250 | 91.2 | Plus |
Eig71Ec-RA | 639 | CG7608-RA | 469..536 | 404..471 | 250 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:09:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651560..15651843 | 535..252 | 1420 | 100 | Minus |
3L | 28110227 | 3L | 15651922..15652138 | 251..35 | 1070 | 99.5 | Minus |
3L | 28110227 | 3L | 15651582..15651649 | 471..404 | 250 | 91.2 | Minus |
3L | 28110227 | 3L | 15651624..15651691 | 513..446 | 250 | 91.2 | Minus |
Blast to na_te.dros performed on 2015-02-11 19:09:33 has no hits.
BO15324.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:17 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7608-PA | 1..522 | 17..539 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:29 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7608-PA | 1..522 | 17..539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:45 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 27..569 | 6..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:05:49 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 27..569 | 6..549 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:05:49 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15651549..15651843 | 252..549 | 98 | <- | Minus |
3L | 15651922..15652131 | 42..251 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:45 Download gff for
BO15324.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15644649..15644943 | 252..549 | 98 | <- | Minus |
arm_3L | 15645022..15645231 | 42..251 | 100 | <- | Minus |
BO15324.complete Sequence
553 bp (553 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633408
> BO15324.complete
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCTGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAAGCAAGCTTTCTAGAC
CAT
BO15324.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ec-RA | 522 | CG7608-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Eig71Ec-RA | 522 | CG7608-PA | 388..455 | 446..513 | 250 | 91.2 | Plus |
Eig71Ec-RA | 522 | CG7608-PA | 430..497 | 404..471 | 250 | 91.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ec-RA | 639 | CG7608-RA | 38..558 | 15..535 | 2605 | 100 | Plus |
Eig71Ec-RA | 639 | CG7608-RA | 427..494 | 446..513 | 250 | 91.2 | Plus |
Eig71Ec-RA | 639 | CG7608-RA | 469..536 | 404..471 | 250 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651560..15651843 | 535..252 | 1420 | 100 | Minus |
3L | 28110227 | 3L | 15651922..15652138 | 251..35 | 1070 | 99.5 | Minus |
3L | 28110227 | 3L | 15651582..15651649 | 471..404 | 250 | 91.2 | Minus |
3L | 28110227 | 3L | 15651624..15651691 | 513..446 | 250 | 91.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:44:22 has no hits.
BO15324.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:50 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 1..522 | 17..539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:29 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 24..566 | 6..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:23 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 40..558 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:51 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 24..566 | 6..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:59 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ec-RA | 40..558 | 17..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:59 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15651922..15652131 | 42..251 | 100 | <- | Minus |
3L | 15652191..15652215 | 17..41 | 100 | | Minus |
3L | 15651558..15651843 | 252..537 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:23 Download gff for
BO15324.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15644658..15644943 | 252..537 | 99 | <- | Minus |
arm_3L | 15645022..15645231 | 42..251 | 100 | <- | Minus |
arm_3L | 15645291..15645315 | 17..41 | 100 | | Minus |
BO15324.pep Sequence
Translation from 16 to 553
> BO15324.pep
MSKITLIFAILCLCVAVQAQTREQEICRQENETCRRNERRLGVQNDVSTT
FNNHCRRQSGIRNWRNVSRCELSLATCRLTLERCAVINCKNVRNSIDGGV
TARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTRSSRRTTRRRAPTTR
TTRRTTRRRAPTTRTTTRRPTEEASFLDH
BO15324.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ec-PA | 173 | CG7608-PA | 1..173 | 1..173 | 905 | 100 | Plus |
Eig71Eb-PB | 95 | CG7355-PB | 1..93 | 1..96 | 241 | 51 | Plus |
Eig71Eb-PA | 95 | CG7355-PA | 1..93 | 1..96 | 241 | 51 | Plus |
Eig71Ei-PB | 102 | CG7327-PB | 1..95 | 1..92 | 170 | 41.2 | Plus |
Eig71Ei-PA | 102 | CG7327-PA | 1..95 | 1..92 | 170 | 41.2 | Plus |