Clone BO15324 Report

Search the DGRC for BO15324

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptEig71Ec-RA
Protein status:BO15324.pep: validated full length
Sequenced Size:553

Clone Sequence Records

BO15324.3prime Sequence

551 bp (550 high quality bases) assembled on 2006-06-16

> BO15324.3prime
ATGGTCTAGAAAGCTTGCTTCTTCAGTAGGTCGACGAGTCGTAGTTCTAG
TAGTTGGCGCACGACGACGTGTAGTTCTTCGAGTAGTTCTAGTTGTTGGA
GCACGACGACGTGTAGTTCTACGAGAAGATCTAGTAGTTGGAGCACGACG
GGTAGTTGGGGTCCTACGAGTAGTTCGAGGTCGTCGGGTGTCAGGAATTC
GCCGGGTTGTCCTCCTTGAAGTTGGAGGGCGAGCGGTGACCCCACCATCA
ATGCTGTTTCTCACATTTTTGCAGTTTATAACAGCACAACGCTCGAGTGT
CAATCGACAAGTAGCCAGAGACAATTCGCAACGAGAGACATTTCGCCAGT
TTCGAATGCCTGACTGGCGGCGGCAGTGATTATTAAATGTGGTCGAAACA
TCATTTTGAACTCCCAATCTCCGTTCATTTCGACGGCAAGTTTCGTTTTC
TTGACGGCAAATTTCTTGTTCACGAGTTTGAGCCTGAACAGCCACGCAAA
GGCAGAGAATAGCAAAAATGAGAGTAATTTTCGACATGTCGACTGATAAC
T

BO15324.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7608-PA 522 Eig71Ec-RA 1..519 537..19 2595 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:49:13
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..558 539..19 2605 100 Minus
Eig71Ec-RA 639 CG7608-RA 427..494 108..41 250 91.2 Minus
Eig71Ec-RA 639 CG7608-RA 469..536 150..83 250 91.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651560..15651843 19..302 1420 100 Plus
3L 28110227 3L 15651922..15652138 303..519 1070 99.5 Plus
3L 28110227 3L 15651624..15651691 41..108 250 91.2 Plus
3L 28110227 3L 15651582..15651649 83..150 250 91.2 Plus
Blast to na_te.dros performed on 2015-02-08 12:49:09 has no hits.

BO15324.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:16 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 15..537 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:28 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 15..537 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:46:40 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..569 5..548 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:50:31 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..569 5..548 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:50:31 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15651549..15651843 5..302 98 <- Plus
3L 15651922..15652131 303..512 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:46:40 Download gff for BO15324.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644649..15644943 5..302 98 <- Plus
arm_3L 15645022..15645231 303..512 100 <- Plus

BO15324.5prime Sequence

551 bp (550 high quality bases) assembled on 2006-05-29

> BO15324.5prime
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCTGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAAGCAAGCTTTCTAGAC
C

BO15324.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7608-PA 522 Eig71Ec-RA 1..519 17..535 2595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..558 15..535 2605 100 Plus
Eig71Ec-RA 639 CG7608-RA 427..494 446..513 250 91.2 Plus
Eig71Ec-RA 639 CG7608-RA 469..536 404..471 250 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651560..15651843 535..252 1420 100 Minus
3L 28110227 3L 15651922..15652138 251..35 1070 99.5 Minus
3L 28110227 3L 15651582..15651649 471..404 250 91.2 Minus
3L 28110227 3L 15651624..15651691 513..446 250 91.2 Minus
Blast to na_te.dros performed on 2015-02-11 19:09:33 has no hits.

BO15324.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:17 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..539 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:29 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7608-PA 1..522 17..539 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:45 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..569 6..549 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:05:49 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 27..569 6..549 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:05:49 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15651549..15651843 252..549 98 <- Minus
3L 15651922..15652131 42..251 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:45 Download gff for BO15324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644649..15644943 252..549 98 <- Minus
arm_3L 15645022..15645231 42..251 100 <- Minus

BO15324.complete Sequence

553 bp (553 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633408

> BO15324.complete
GAAGTTATCAGTCGACATGTCGAAAATTACTCTCATTTTTGCTATTCTCT
GCCTTTGCGTGGCTGTTCAGGCTCAAACTCGTGAACAAGAAATTTGCCGT
CAAGAAAACGAAACTTGCCGTCGAAATGAACGGAGATTGGGAGTTCAAAA
TGATGTTTCGACCACATTTAATAATCACTGCCGCCGCCAGTCAGGCATTC
GAAACTGGCGAAATGTCTCTCGTTGCGAATTGTCTCTGGCTACTTGTCGA
TTGACACTCGAGCGTTGTGCTGTTATAAACTGCAAAAATGTGAGAAACAG
CATTGATGGTGGGGTCACCGCTCGCCCTCCAACTTCAAGGAGGACAACCC
GGCGAATTCCTGACACCCGACGACCTCGAACTACTCGTAGGACCCCAACT
ACCCGTCGTGCTCCAACTACTAGATCTTCTCGTAGAACTACACGTCGTCG
TGCTCCAACAACTAGAACTACTCGAAGAACTACACGTCGTCGTGCGCCAA
CTACTAGAACTACGACTCGTCGACCTACTGAAGAAGCAAGCTTTCTAGAC
CAT

BO15324.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 522 CG7608-PA 1..519 17..535 2595 100 Plus
Eig71Ec-RA 522 CG7608-PA 388..455 446..513 250 91.2 Plus
Eig71Ec-RA 522 CG7608-PA 430..497 404..471 250 91.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-RA 639 CG7608-RA 38..558 15..535 2605 100 Plus
Eig71Ec-RA 639 CG7608-RA 427..494 446..513 250 91.2 Plus
Eig71Ec-RA 639 CG7608-RA 469..536 404..471 250 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651560..15651843 535..252 1420 100 Minus
3L 28110227 3L 15651922..15652138 251..35 1070 99.5 Minus
3L 28110227 3L 15651582..15651649 471..404 250 91.2 Minus
3L 28110227 3L 15651624..15651691 513..446 250 91.2 Minus
Blast to na_te.dros performed on 2014-11-27 06:44:22 has no hits.

BO15324.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:50 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 1..522 17..539 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:29 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 24..566 6..549 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:23 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 40..558 17..537 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:51 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 24..566 6..549 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:59 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
Eig71Ec-RA 40..558 17..537 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:59 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15651922..15652131 42..251 100 <- Minus
3L 15652191..15652215 17..41 100   Minus
3L 15651558..15651843 252..537 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:23 Download gff for BO15324.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15644658..15644943 252..537 99 <- Minus
arm_3L 15645022..15645231 42..251 100 <- Minus
arm_3L 15645291..15645315 17..41 100   Minus

BO15324.pep Sequence

Translation from 16 to 553

> BO15324.pep
MSKITLIFAILCLCVAVQAQTREQEICRQENETCRRNERRLGVQNDVSTT
FNNHCRRQSGIRNWRNVSRCELSLATCRLTLERCAVINCKNVRNSIDGGV
TARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTRSSRRTTRRRAPTTR
TTRRTTRRRAPTTRTTTRRPTEEASFLDH

BO15324.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ec-PA 173 CG7608-PA 1..173 1..173 905 100 Plus
Eig71Eb-PB 95 CG7355-PB 1..93 1..96 241 51 Plus
Eig71Eb-PA 95 CG7355-PA 1..93 1..96 241 51 Plus
Eig71Ei-PB 102 CG7327-PB 1..95 1..92 170 41.2 Plus
Eig71Ei-PA 102 CG7327-PA 1..95 1..92 170 41.2 Plus