Clone Sequence Records
BO15325.3prime Sequence
596 bp (595 high quality bases) assembled on 2006-06-16
> BO15325.3prime
ATGGTCTAGAAAGCTTGCATAAAAGTAGAACACATAAGATAGTTTTTCTT
TAAGCCACTGGGAAAAACCGACTTTTTTGGTAGTGCCCTTGGACTTATTT
TCTCCACGGTTTCCCATCAGCAGTTGATCGGAAATGATCGCGTTTCTTTC
ATCCGCGGCATCGACAATAGCCATTCCTGTAGTTTCATTGTCAGGGGGAT
CGCCATTGCCCTCTGAGCATTGCTCCAGAAATTCACTGACGGCATTCTCG
GAAACGGGGTTCTCAGCTGTGACTTTTACGCGAATATCCCCGCCATATCC
AATTTTTTGGCCATCGTAGCTCAGCGCGATTCGGGCATCCTCCACGCTGA
AGTACTTCAGGTACATGCGATTGGTTTTCGTCAAGCTTTTGGCAACAATG
CCACCGATATCGAGAAAGAAGCAGTAGACAATGTAAGCCCTGTCCAACTC
GTAGTCGCTTACGGATACCCAAAAAGACTGTCTGGGATCTTCGCCATACT
TCTTTTTATTATCCTGCAAAATGGTATGGTCTGAATTGTTTCCAACGACT
TGATGGAACGCCTTCCGCGACAGACCATCCATGTCGACTGATAACT
BO15325.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 567 | CG1421-RA | 1..564 | 582..19 | 2820 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:15:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..721 | 582..19 | 2820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903713 | 582..19 | 2820 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:15:06 has no hits.
BO15325.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:18 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 15..582 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:30 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 15..582 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:50:19 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..727 | 11..590 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:11:10 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..727 | 11..590 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:11:10 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903146..21903719 | 11..590 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:50:19 Download gff for
BO15325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903146..21903719 | 11..590 | 98 | | Minus |
BO15325.5prime Sequence
596 bp (595 high quality bases) assembled on 2006-06-16
> BO15325.5prime
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATGCAAGCTTTCTAGACC
BO15325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 567 | CG1421-RA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:31:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..721 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:31:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903713 | 17..580 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:31:38 has no hits.
BO15325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:19 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:31 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-PA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:22 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..727 | 9..588 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:45:37 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 154..727 | 9..588 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:45:37 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903146..21903719 | 9..588 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:22 Download gff for
BO15325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903146..21903719 | 9..588 | 98 | | Plus |
BO15325.complete Sequence
598 bp (598 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633409
> BO15325.complete
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATGCAAGCTTTCTAGACCAT
BO15325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:00:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 567 | CG1421-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-RA | 747 | CG1421-RA | 158..721 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21903150..21903713 | 17..580 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:00:42 has no hits.
BO15325.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:53 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:31 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 85..658 | 9..588 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:35 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 158..721 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:56 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 85..658 | 9..588 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:14 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1421-RA | 158..721 | 17..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:14 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21903150..21903713 | 17..582 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:35 Download gff for
BO15325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21903150..21903713 | 17..582 | 99 | | Plus |
BO15325.pep Sequence
Translation from 16 to 598
> BO15325.pep
MDGLSRKAFHQVVGNNSDHTILQDNKKKYGEDPRQSFWVSVSDYELDRAY
IVYCFFLDIGGIVAKSLTKTNRMYLKYFSVEDARIALSYDGQKIGYGGDI
RVKVTAENPVSENAVSEFLEQCSEGNGDPPDNETTGMAIVDAADERNAII
SDQLLMGNRGENKSKGTTKKVGFSQWLKEKLSYVFYFYASFLDH
BO15325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1421-PA | 188 | CG1421-PA | 1..188 | 1..188 | 985 | 100 | Plus |