Clone BO15325 Report

Search the DGRC for BO15325

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG1421-RA
Protein status:BO15325.pep: validated full length
Sequenced Size:598

Clone Sequence Records

BO15325.3prime Sequence

596 bp (595 high quality bases) assembled on 2006-06-16

> BO15325.3prime
ATGGTCTAGAAAGCTTGCATAAAAGTAGAACACATAAGATAGTTTTTCTT
TAAGCCACTGGGAAAAACCGACTTTTTTGGTAGTGCCCTTGGACTTATTT
TCTCCACGGTTTCCCATCAGCAGTTGATCGGAAATGATCGCGTTTCTTTC
ATCCGCGGCATCGACAATAGCCATTCCTGTAGTTTCATTGTCAGGGGGAT
CGCCATTGCCCTCTGAGCATTGCTCCAGAAATTCACTGACGGCATTCTCG
GAAACGGGGTTCTCAGCTGTGACTTTTACGCGAATATCCCCGCCATATCC
AATTTTTTGGCCATCGTAGCTCAGCGCGATTCGGGCATCCTCCACGCTGA
AGTACTTCAGGTACATGCGATTGGTTTTCGTCAAGCTTTTGGCAACAATG
CCACCGATATCGAGAAAGAAGCAGTAGACAATGTAAGCCCTGTCCAACTC
GTAGTCGCTTACGGATACCCAAAAAGACTGTCTGGGATCTTCGCCATACT
TCTTTTTATTATCCTGCAAAATGGTATGGTCTGAATTGTTTCCAACGACT
TGATGGAACGCCTTCCGCGACAGACCATCCATGTCGACTGATAACT

BO15325.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 567 CG1421-RA 1..564 582..19 2820 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..721 582..19 2820 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903713 582..19 2820 100 Minus
Blast to na_te.dros performed on 2015-02-12 18:15:06 has no hits.

BO15325.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:18 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 15..582 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:30 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 15..582 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:50:19 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 11..590 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:11:10 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 11..590 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:11:10 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 21903146..21903719 11..590 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:50:19 Download gff for BO15325.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903146..21903719 11..590 98   Minus

BO15325.5prime Sequence

596 bp (595 high quality bases) assembled on 2006-06-16

> BO15325.5prime
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATGCAAGCTTTCTAGACC

BO15325.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 567 CG1421-RA 1..564 17..580 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..721 17..580 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:31:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903713 17..580 2820 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:31:38 has no hits.

BO15325.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:19 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..584 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:31 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-PA 1..567 17..584 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:22 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 9..588 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:45:37 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 9..588 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:45:37 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21903146..21903719 9..588 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:22 Download gff for BO15325.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903146..21903719 9..588 98   Plus

BO15325.complete Sequence

598 bp (598 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633409

> BO15325.complete
GAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCGTTCCATCAAG
TCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAATAAAAAGAAG
TATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAAGCGACTACGA
GTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGATATCGGTGGCA
TTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCTGAAGTACTTC
AGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCCAAAAAATTGG
ATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAACCCCGTTTCCG
AGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGGCAATGGCGAT
CCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATGCCGCGGATGA
AAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAACCGTGGAGAAA
ATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCAGTGGCTTAAA
GAAAAACTATCTTATGTGTTCTACTTTTATGCAAGCTTTCTAGACCAT

BO15325.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 567 CG1421-PA 1..564 17..580 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..721 17..580 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903713 17..580 2820 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:00:42 has no hits.

BO15325.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:53 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 1..567 17..584 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:31 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 85..658 9..588 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:35 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 158..721 17..582 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:56 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 85..658 9..588 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:14 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 158..721 17..582 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:14 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21903150..21903713 17..582 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:35 Download gff for BO15325.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903150..21903713 17..582 99   Plus

BO15325.pep Sequence

Translation from 16 to 598

> BO15325.pep
MDGLSRKAFHQVVGNNSDHTILQDNKKKYGEDPRQSFWVSVSDYELDRAY
IVYCFFLDIGGIVAKSLTKTNRMYLKYFSVEDARIALSYDGQKIGYGGDI
RVKVTAENPVSENAVSEFLEQCSEGNGDPPDNETTGMAIVDAADERNAII
SDQLLMGNRGENKSKGTTKKVGFSQWLKEKLSYVFYFYASFLDH

BO15325.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-PA 188 CG1421-PA 1..188 1..188 985 100 Plus