Clone BO15344 Report

Search the DGRC for BO15344

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG32021-RA
Protein status:BO15344.pep: validated full length
Sequenced Size:385

Clone Sequence Records

BO15344.3prime Sequence

383 bp (382 high quality bases) assembled on 2006-06-16

> BO15344.3prime
ATGGTCTAGAAAGCTTGCCCGCCGATCCCATGGCAGGCAATGCAGCAACT
GCCCATGCAGCAGCAGCCTCCCCCACGTCAACACCCACATCCTCATCGGG
ATCCGCATCACCAATATCCGCACCAGATGCCGATCTCGAGCCACGCATGT
ACTGTACCGAAGAAAACGGCTTACGAAAGCGAACGTAAGCCCGGTGGATC
CACGGCGCATCTTTAAGGCCCTACGATCTGGTCTGCCCGGCCTGTTAATT
TTGCTGATGGAACACTTTCTCGCCGAGATGTTCGGCAAACAAAAAACGAG
GAGCAGTCCGCTCAGCTGGCGGAAGATGCTGATGGCGACATCATCAGAAG
TTACAACCGCAGCCGGCATGTCGACTGATAACT

BO15344.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32021-PA 354 CG32021-RA 1..351 369..19 1730 99.7 Minus
CG7467-PC 7671 osa-RC 5120..5156 293..329 160 97.2 Plus
CG7467-PA 8112 osa-RA 5561..5597 293..329 160 97.2 Plus
CG7467-PB 8151 osa-RB 5600..5636 293..329 160 97.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..770 369..19 1740 99.7 Minus
osa-RF 10243 CG7467-RF 5223..5336 19..132 285 83.3 Plus
osa-RE 9940 CG7467-RE 4920..5033 19..132 285 83.3 Plus
osa-RF 10243 CG7467-RF 5443..5538 141..236 255 84.4 Plus
osa-RF 10243 CG7467-RF 5666..5738 268..339 220 87.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907337..907554 19..236 1090 100 Plus
4 1348131 4 907620..907756 233..369 670 99.3 Plus
3R 32079331 3R 2925169..2925306 369..233 340 84.8 Minus
3R 32079331 3R 2996823..2996960 233..369 340 84.8 Plus
3R 32079331 3R 17692725..17692838 132..19 285 83.3 Minus
2R 25286936 2R 1247305..1247434 241..370 270 84 Plus
3R 32079331 3R 17692523..17692618 236..141 255 84.4 Minus
3R 32079331 3R 3344376..3344501 362..238 250 81.7 Minus
3R 32079331 3R 3467361..3467455 143..237 250 84.2 Plus
3R 32079331 3R 3519179..3519265 105..19 225 83.9 Minus
3R 32079331 3R 3467179..3467251 19..91 200 84.9 Plus
3R 32079331 3R 17692323..17692395 339..268 195 87.7 Minus
3R 32079331 3R 3344679..3344787 132..23 185 80 Minus
Blast to na_te.dros performed 2015-02-10 15:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 43..126 132 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 33..125 123 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 42..125 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..6962 42..175 122 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 43..125 118 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 42..88 109 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 42..89 105 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 41..95 104 65.5 Plus

BO15344.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:41 Download gff for BO15344.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 18..369 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:02 Download gff for BO15344.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 18..369 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-13 20:34:50 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:50:48 Download gff for BO15344.3prime
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 415..783 4..378 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:50:48 Download gff for BO15344.3prime
Subject Subject Range Query Range Percent Splice Strand
4 907324..907550 4..232 97 <- Plus
4 907620..907761 233..378 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:34:50 Download gff for BO15344.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 927950..928176 4..232 97 <- Plus
arm_4 928246..928387 233..378 96   Plus

BO15344.5prime Sequence

383 bp (382 high quality bases) assembled on 2006-06-16

> BO15344.5prime
GAAGTTATCAGTCGACATGCCGGCTGCGGTTGTAACTTCTGATGATGTCG
CCATCAGCATCTTCCGCCAGCTGAGCGGACTGCTCCTCGTTTTTTGTTTG
CCGAACATCTCGGCGAGAAAGTGTTCCATCAGCAAAATTAACAGGCCGGG
CAGACCAGATCGTAGGGCCTTAAAGATGCGCCGTGGATCCACCGGGCTTA
CGTTCGCTTTCGTAAGCCGTTTTCTTCGGTACAGTACATGCGTGGCTCGA
GATCGGCATCTGGTGCGGATATTGGTGATGCGGATCCCGATGAGGATGTG
GGTGTTGACGTGGGGGAGGCTGCTGCTGCATGGGCAGTTGCTGCATTGCC
TGCCATGGGATCGGCGGGCAAGCTTTCTAGACC

BO15344.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32021-PA 354 CG32021-RA 1..351 17..367 1730 99.7 Plus
CG7467-PC 7671 osa-RC 5120..5156 93..57 160 97.2 Minus
CG7467-PA 8112 osa-RA 5561..5597 93..57 160 97.2 Minus
CG7467-PB 8151 osa-RB 5600..5636 93..57 160 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..770 17..367 1740 99.7 Plus
osa-RF 10243 CG7467-RF 5223..5336 367..254 285 83.3 Minus
osa-RE 9940 CG7467-RE 4920..5033 367..254 285 83.3 Minus
osa-RF 10243 CG7467-RF 5443..5538 245..150 255 84.4 Minus
osa-RF 10243 CG7467-RF 5666..5738 118..47 220 87.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907337..907554 367..150 1090 100 Minus
4 1348131 4 907620..907756 153..17 670 99.3 Minus
3R 32079331 3R 2925169..2925306 17..153 340 84.8 Plus
3R 32079331 3R 2996823..2996960 153..17 340 84.8 Minus
3R 32079331 3R 17692725..17692838 254..367 285 83.3 Plus
2R 25286936 2R 1247305..1247434 145..16 270 84 Minus
3R 32079331 3R 17692523..17692618 150..245 255 84.4 Plus
3R 32079331 3R 3344376..3344501 24..148 250 81.7 Plus
3R 32079331 3R 3467361..3467455 243..149 250 84.2 Minus
3R 32079331 3R 3519179..3519265 281..367 225 83.9 Plus
3R 32079331 3R 3467179..3467251 367..295 200 84.9 Minus
3R 32079331 3R 17692323..17692395 47..118 195 87.7 Plus
3R 32079331 3R 3344679..3344787 254..363 185 80 Plus
Blast to na_te.dros performed 2015-02-04 02:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 343..260 132 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 353..261 123 59.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 344..261 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..6962 344..211 122 56.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 343..261 118 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 344..298 109 70.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 344..297 105 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 345..291 104 65.5 Minus

BO15344.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:42 Download gff for BO15344.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..368 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:03 Download gff for BO15344.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..368 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-09 20:42:24 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:45 Download gff for BO15344.5prime
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 415..783 8..382 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:45 Download gff for BO15344.5prime
Subject Subject Range Query Range Percent Splice Strand
4 907324..907550 154..382 97 <- Minus
4 907620..907761 8..153 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:24 Download gff for BO15344.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 927950..928176 154..382 97 <- Minus
arm_4 928246..928387 8..153 96   Minus

BO15344.complete Sequence

385 bp assembled on 2007-10-17

GenBank Submission: FJ633419

> BO15344.complete
GAAGTTATCAGTCGACATGCCGGCTGCGGTTGTAACTTCTGATGATGTCG
CCATCAGCATCTTCCGCCAGCTGAGCGGACTGCTCCTCGTTTTTTGTTTG
CCGAACATCTCGGCGAGAAAGTGTTCCATCAGCAAAATTAACAGGCCGGG
CAGACCAGATCGTAGGGCCTTAAAGATGCGCCGTGGATCCACCGGGCTTA
CGTTCGCTTTCGTAAGCCGTTTTCTTCGGTACAGTACATGCGTGGCTCGA
GATCGGCATCTGGTGCGGATATTGGTGATGCGGATCCCGATGAGGATGTG
GGTGTTGACGTGGGGGAGGCTGCTGCTGCATGGGCAGTTGCTGCATTGCC
TGCCATGGGATCGGCGGGCAAGCTTTCTAGACCAT

BO15344.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 07:22:31 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..770 17..367 1740 99.7 Plus
osa-RF 10243 CG7467-RF 5223..5336 367..254 285 83.3 Minus
osa-RE 9940 CG7467-RE 4920..5033 367..254 285 83.3 Minus
osa-RF 10243 CG7467-RF 5443..5538 245..150 255 84.4 Minus
osa-RF 10243 CG7467-RF 5666..5738 118..47 195 87.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907337..907554 367..150 1090 100 Minus
4 1348131 4 907620..907756 153..17 670 99.3 Minus
3R 32079331 3R 2996823..2996960 153..17 340 84.8 Minus
3R 32079331 3R 2925169..2925306 17..153 340 84.8 Plus
3R 32079331 3R 17692725..17692838 254..367 285 83.3 Plus
2R 25286936 2R 1247305..1247434 145..16 270 84 Minus
3R 32079331 3R 17692523..17692618 150..245 255 84.4 Plus
3R 32079331 3R 3344376..3344501 24..148 250 81.7 Plus
3R 32079331 3R 3467361..3467455 243..149 250 84.2 Minus
2R 25286936 2R 1459668..1459774 153..48 230 83.2 Minus
3R 32079331 3R 3519179..3519265 281..367 225 83.9 Plus
2L 23513712 2L 22340894..22340988 244..150 220 82.1 Minus
3R 32079331 3R 3467179..3467251 367..295 200 84.9 Minus
3R 32079331 3R 17692323..17692395 47..118 195 87.7 Plus
3R 32079331 3R 3344679..3344787 254..363 185 80 Plus
2R 25286936 2R 4329414..4329458 65..21 180 93.3 Minus
Blast to na_te.dros performed 2014-11-27 07:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 343..260 132 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 353..261 123 59.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 344..261 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..6962 344..211 122 56.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 343..261 118 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 344..298 109 70.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 344..297 105 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 345..291 104 65.5 Minus

BO15344.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:48 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 1..354 17..368 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:13 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 270..638 8..382 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 05:13:23 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:43:34 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 275..625 17..369 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:20 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 420..770 17..369 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:20 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
4 907333..907550 154..369 99 <- Minus
4 907620..907756 17..153 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:23 Download gff for BO15344.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 927959..928176 154..369 99 <- Minus
arm_4 928246..928382 17..153 99   Minus

BO15344.pep Sequence

Translation from 16 to 385

> BO15344.pep
MPAAVVTSDDVAISIFRQLSGLLLVFCLPNISARKCSISKINRPGRPDRR
ALKMRRGSTGLTFAFVSRFLRYSTCVARDRHLVRILVMRIPMRMWVLTWG
RLLLHGQLLHCLPWDRRASFLDH
Sequence BO15344.pep has no blast hits.