Clone Sequence Records
BO15347.3prime Sequence
623 bp (622 high quality bases) assembled on 2006-06-16
> BO15347.3prime
ATGGTCTAGAAAGCTTGCGATGCTCACGTTGATGGCATTCTTGATCACAA
TGTTCCCGGCTCCGTGCCGTATCGTTAGATTGCTGTCGATCTCAATGCCG
CCGGACTTGCCTTGGCCAGCATCCGTTGGCGTTGGCTTGGCGTTTTTCGA
TCGAGAGCTGGGCCTTTTCTTGGCATCGCCGCTAAGATCCAGGGACTTGA
CCACCTTGAGCAGTCCATTGCAGCCCGTGTAGTCGACCACCTGCTGCGTG
GAGCTGCTGCCCAGGTAGATCCTACCGTCGTTACCCGTGTACTTGAGGGC
TCCGCTATTGTTCTGAATCTTGAGTCGGGTGCTATTGCCGATTACTTGCA
GTTGCCCGGAGTTGTTCACAATACGTATGCGGTTGCCATTGCCGATGATC
CTGAGATCGCGCGTGTTGTTCTCAATGCGGTACTCCTTGCAGTTGCCCAC
CAGATCCTTGCTGGCGTAGATGGTTGTCTCCGGCGGCGTGGAACTTTTCT
TGCTCTTATTGGGGGATTTACCCTGCTCGTGCTCTTTCTGGCAAGTGGAG
CACTCGTCATCGTCATACGAATCGCTCGCCGAATCGGTTTCTATCACACG
AACGCCCATGTCGACTGATAACT
BO15347.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15678-PA | 594 | CG15678-RA | 1..591 | 609..19 | 2855 | 99.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:39:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pirk-RB | 1846 | CG15678-RB | 896..1486 | 609..19 | 2895 | 99.3 | Minus |
pirk-RA | 1301 | CG15678-RA | 351..941 | 609..19 | 2895 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:39:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21661327..21661917 | 19..609 | 2895 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-01-30 18:39:22 has no hits.
BO15347.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:45 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-PA | 1..594 | 16..609 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:08 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-PA | 1..594 | 16..609 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:00:43 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 344..951 | 11..617 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:13:43 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 344..951 | 11..617 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:13:43 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21661317..21661924 | 11..617 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:00:43 Download gff for
BO15347.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17548822..17549429 | 11..617 | 98 | | Plus |
BO15347.5prime Sequence
623 bp (622 high quality bases) assembled on 2006-06-16
> BO15347.5prime
GAAGTTATCAGTCGACATGGGCGTTCGTGTGATAGAAACCGATTCGGCGA
GCGATTCGTATGACGATGACGAGTGCTCCACTTGCCAGAAAGAGCACGAG
CAGGGTAAATCCCCCAATAAGAGCAAGAAAAGTTCCACGCCGCCGGAGAC
AACCATCTACGCCAGCAAGGATCTGGTGGGCAACTGCAAGGAGTACCGCA
TTGAGAACAACACGCGCGATCTCAGGATCATCGGCAATGGCAACCGCATA
CGTATTGTGAACAACTCCGGGCAACTGCAAGTAATCGGCAATAGCACCCG
ACTCAAGATTCAGAACAATAGCGGAGCCCTCAAGTACACGGGTAACGACG
GTAGGATCTACCTGGGCAGCAGCTCCACGCAGCAGGTGGTCGACTACACG
GGCTGCAATGGACTGCTCAAGGTGGTCAAGTCCCTGGATCTTAGCGGCGA
TGCCAAGAAAAGGCCCAGCTCTCGATCGAAAAACGCCAAGCCAACGCCAA
CGGATGCTGGCCAAGGCAAGTCCGGCGGCATTGAGATCGACAGCAATCTA
ACGATACGGCACGGAGCCGGGAACATTGTGATCAAGAATGCCATCAACGT
GAGCATCGCAAGCTTTCTAGACC
BO15347.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15678-PA | 594 | CG15678-RA | 1..591 | 17..607 | 2855 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pirk-RB | 1846 | CG15678-RB | 896..1486 | 17..607 | 2895 | 99.3 | Plus |
pirk-RA | 1301 | CG15678-RA | 351..941 | 17..607 | 2895 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:11:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21661327..21661917 | 607..17 | 2895 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:11:41 has no hits.
BO15347.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:46 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-PA | 1..594 | 17..610 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:10 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-PA | 1..594 | 17..610 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:54:51 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 344..951 | 9..615 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:29:45 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 344..951 | 9..615 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:29:45 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21661317..21661924 | 9..615 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:51 Download gff for
BO15347.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17548822..17549429 | 9..615 | 98 | | Minus |
BO15347.complete Sequence
625 bp assembled on 2007-10-17
GenBank Submission: FJ633420
> BO15347.complete
GAAGTTATCAGTCGACATGGGCGTTCGTGTGATAGAAACCGATTCGGCGA
GCGATTCGTATGACGATGACGAGTGCTCCACTTGCCAGAAAGAGCACGAG
CAGGGTAAATCCCCCAATAAGAGCAAGAAAAGTTCCACGCCGCCGGAGAC
AACCATCTACGCCAGCAAGGATCTGGTGGGCAACTGCAAGGAGTACCGCA
TTGAGAACAACACGCGCGATCTCAGGATCATCGGCAATGGCAACCGCATA
CGTATTGTGAACAACTCCGGGCAACTGCAAGTAATCGGCAATAGCACCCG
ACTCAAGATTCAGAACAATAGCGGAGCCCTCAAGTACACGGGTAACGACG
GTAGGATCTACCTGGGCAGCAGCTCCACGCAGCAGGTGGTCGACTACACG
GGCTGCAATGGACTGCTCAAGGTGGTCAAGTCCCTGGATCTTAGCGGCGA
TGCCAAGAAAAGGCCCAGCTCTCGATCGAAAAACGCCAAGCCAACGCCAA
CGGATGCTGGCCAAGGCAAGTCCGGCGGCATTGAGATCGACAGCAATCTA
ACGATACGGCACGGAGCCGGGAACATTGTGATCAAGAATGCCATCAACGT
GAGCATCGCAAGCTTTCTAGACCAT
BO15347.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pirk-RB | 594 | CG15678-PB | 1..591 | 17..607 | 2895 | 99.3 | Plus |
pirk-RA | 594 | CG15678-PA | 1..591 | 17..607 | 2895 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pirk-RB | 1846 | CG15678-RB | 896..1486 | 17..607 | 2895 | 99.3 | Plus |
pirk-RA | 1301 | CG15678-RA | 351..941 | 17..607 | 2895 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21661327..21661917 | 607..17 | 2895 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:21:02 has no hits.
BO15347.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:49 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-RA | 1..594 | 17..610 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:15 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-RA | 321..928 | 9..615 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:36 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 351..941 | 17..609 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:36:46 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15678-RA | 328..918 | 17..609 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:01 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pirk-RA | 351..941 | 17..609 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:01 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21661324..21661917 | 17..609 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:36 Download gff for
BO15347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17548829..17549422 | 17..609 | 98 | | Minus |
BO15347.pep Sequence
Translation from 16 to 625
> BO15347.pep
MGVRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYAS
KDLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQN
NSGALKYTGNDGRIYLGSSSTQQVVDYTGCNGLLKVVKSLDLSGDAKKRP
SSRSKNAKPTPTDAGQGKSGGIEIDSNLTIRHGAGNIVIKNAINVSIASF
LDH
BO15347.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:31:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pirk-PB | 197 | CG15678-PB | 1..197 | 1..197 | 1012 | 100 | Plus |
pirk-PA | 197 | CG15678-PA | 1..197 | 1..197 | 1012 | 100 | Plus |