Clone BO15349 Report

Search the DGRC for BO15349

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG7632-RA
Protein status:BO15349.pep: validated full length
Sequenced Size:1024

Clone Sequence Records

BO15349.3prime Sequence

953 bp (751 high quality bases) assembled on 2006-06-16

> BO15349.3prime
ATGGTCTAGAAAGCTTGCTAAAGGCCGGTACCTATTGATGAAGGAGTTGA
TGATAGGCGCCACCTTCTCTGGCTCGTTAAGGTGGACATGGTGAGTTCCT
TCAACCTCGTGGTATTCGAACAGAGGATTCTTCTGCAGCTCCGCTAACAC
TTCATCGAAGTACTCCTTGCGTTCGTAGTAGGGAGCCTGCAGGGCCTTGA
TAAAGAGATGCGGGCACTTAATTCTGCGCGCCATCTCCATTGGCACCTCC
TGGTGCAACGTGTAAAATAGTGATGACTTCAGTCGGTTGTCGCGGGAGAA
GTAATACTTGTGAGGCTCGTGCGTCGATGGTTTGCAGTTCCGCTGCAGCA
GATACTTGCAGGCATCAATTGAGACGGACTTATTTGAGCCCTCGTGCAGC
CGGGTTACCAACTGATCCCAGTCATAGGCAGGCGGCTCAGACCCACTCTT
CAGACGTCGTTCCAGCTTCAGTGCGGACTCAATTCGCTCGGTAAGCGAAT
CCACAATGCCGCGAGCACTTCGAACTGGCGGCTTCAGCACATCCAGACCC
ACGAACAGATCAACTTTGTCAGGAAACAGAGCACTGAACACAAAGCCATT
GATGGAGCTCATCGAGTGGGCCAATATAGAGATCTTGTCCCAGTTGTACT
CCTCCATTAGTCGGCGAGTGATCAGCACGAGGTCAATGGAGTGGTAGGAA
GTGCCAGGTGGCAGCCAGGAGGACAACCCATGTCCTGGTGCATCGATGCT
TAGGAAAGAGAGGTGGGACGGCAGGAGAGGAGCCAAAGTATCGAAGGTAC
CGGCATTATCCTGCCAGCCATGCATGCCAACAATGGGTCGTACGTGCTTC
GGTCCATACCATTTGCCCGAGATGTGACCCCATGGAACTGGTATGCTGAT
TTCATCGAAATGTTTGTTGAGGATTTTGAAAGGCTTTTGTGGGGCCACTG
CTG

BO15349.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-PA 993 CG7632-RA 72..990 937..19 4570 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-RA 1442 CG7632-RA 281..1214 953..19 4620 99.7 Minus
CG7632-RB 1388 CG7632-RB 268..1160 911..19 4465 100 Minus
CG11309-RF 2125 CG11309-RF 370..480 900..790 210 79.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:13:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21305079..21305969 909..19 4455 100 Minus
3L 28110227 3L 21303430..21303540 790..900 210 79.3 Plus
Blast to na_te.dros performed on 2015-02-06 11:13:19 has no hits.

BO15349.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:50 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-PA 57..993 16..953 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:14 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-PA 57..993 16..953 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:49:45 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 281..1214 19..953 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:32:20 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 281..1214 19..953 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:32:20 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21304977..21305019 910..953 93 -> Minus
3L 21305079..21305969 19..909 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:49:45 Download gff for BO15349.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21298077..21298119 910..953 93 -> Minus
arm_3L 21298179..21299069 19..909 100   Minus

BO15349.5prime Sequence

869 bp (768 high quality bases) assembled on 2006-06-16

> BO15349.5prime
GAAGTTATCAGTCGACATGAAGGTGTCCAGAGGTCTGTTCCTGCTAAAAC
AGTTGCCAAATGTAAGAAACTCCAGCAGTGGGCCCACAAAGCCTTTCAAA
ATCCTCAACAAACATTTCGATGAAATCAGCATACCAGTTCCATGGGGTCA
CATCTCGGGCAAATGGTATGGACCGAAGCACGTACGACCCATTGTTGGCA
TGCATGGCTGGCAGGATAATGCCGGTACCTTCGATACTTTGGCTCCTCTC
CTGCCGTCCCACCTCTCTTTCCTAAGCATCGATGCACCAGGACATGGGTT
GTCCTCCTGGCTGCCACCTGGCACTTCCTACCACTCCATTGACCTCGTGC
TGATCACTCGCCGACTAATGGAGGAGTACAACTGGGACAAGATCTCTATA
TTGGCCCACTCGATGAGCTCCATCAATGGCTTTGTGTTCAGTGCTCTGTT
TCCTGACAAAGTTGATCTGTTCGTGGGTCTGGATGTGCTGAAGCCGCCAG
TTCGAAGTGCTCGCGGCATTGTGGATTCGCTTACCGAGCGAATTGAGTCC
GCACTGAAGCTGGAACGACGTCTGAAGAGTGGGTCTGAGCCGCCTGCCTA
TGACTGGGATCAGTTGGTAACCCGGCTGCACGAGGGCTCAAATAAGTCCG
TCTCAATTGATGCCTGCAAGTATCTGCTGCAGCGGAACTGCAAACCATCG
ACGCACGAGCCTCACAAGTATTACTTCTCCCGCGACAACCGACTGAAGTC
ATCACTATTTTACACGTTGCACCAGGAGGTGCCAATGGAGATGGCGCGCA
GAATTAAGTGCCCGCATCTCTTTATCAAGGCCCTGCAAGCTCCCTACTAC
GAACGCAAGGAGTACTTCG

BO15349.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-PA 993 CG7632-RA 1..853 17..869 4215 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:43:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-RA 1442 CG7632-RA 225..1077 17..869 4235 99.8 Plus
CG7632-RB 1388 CG7632-RB 268..1023 114..869 3765 99.9 Plus
CG7632-RB 1388 CG7632-RB 225..269 17..61 225 100 Plus
CG11309-RF 2125 CG11309-RF 370..480 125..235 210 79.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21305079..21305832 116..869 3755 99.9 Plus
3L 28110227 3L 21304921..21305019 17..115 480 99 Plus
3L 28110227 3L 21303430..21303540 235..125 210 79.3 Minus
Blast to na_te.dros performed on 2015-02-12 00:43:04 has no hits.

BO15349.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:51 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-PA 1..853 17..869 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:15 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-PA 1..853 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:33:55 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 222..1077 14..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:15:19 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 222..1077 14..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:15:19 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21304918..21305019 14..115 98 -> Plus
3L 21305079..21305832 116..869 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:33:55 Download gff for BO15349.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21298018..21298119 14..115 98 -> Plus
arm_3L 21298179..21298932 116..869 99   Plus

BO15349.complete Sequence

1024 bp (1024 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633422

> BO15349.complete
GAAGTTATCAGTCGACATGAAGGTGTCCAGAGGTCTGTTCCTGCTAAAAC
AGTTGCCAAATGTAAGAAACTCCAGCAGTGGGCCCACAAAGCCTTTCAAA
ATCCTCAACAAACATTTCGATGAAATCAGCATACCAGTTCCATGGGGTCA
CATCTCGGGCAAATGGTATGGACCGAAGCACGTACGACCCATTGTTGGCA
TGCATGGCTGGCAGGATAATGCCGGTACCTTCGATACTTTGGCTCCTCTC
CTGCCGTCCCACCTCTCTTTCCTAAGCATCGATGCACCAGGACATGGGTT
GTCCTCCTGGCTGCCACCTGGCACTTCCTACCACTCCATTGACCTCGTGC
TGATCACTCGCCGACTAATGGAGGAGTACAACTGGGACAAGATCTCTATA
TTGGCCCACTCGATGAGCTCCATCAATGGCTTTGTGTTCAGTGCTCTGTT
TCCTGACAAAGTTGATCTGTTCGTGGGTCTGGATGTGCTGAAGCCGCCAG
TTCGAAGTGCTCGCGGCATTGTGGATTCGCTTACCGAGCGAATTGAGTCC
GCACTGAAGCTGGAACGACGTCTGAAGAGTGGGTCTGAGCCGCCTGCCTA
TGACTGGGATCAGTTGGTAACCCGGCTGCACGAGGGCTCAAATAAGTCCG
TCTCAATTGATGCCTGCAAGTATCTGCTGCAGCGGAACTGCAAACCATCG
ACGCACGAGCCTCACAAGTATTACTTCTCCCGCGACAACCGACTGAAGTC
ATCACTATTTTACACGTTGCACCAGGAGGTGCCAATGGAGATGGCGCGCA
GAATTAAGTGCCCGCATCTCTTTATCAAGGCCCTGCAGGCTCCCTACTAC
GAACGCAAGGAGTACTTCGATGAAGTGTTAGCGGAGCTGCAGAAGAATCC
TCTGTTCGAATACCACGAGGTTGAAGGAACTCACCATGTCCACCTTAACG
AGCCAGAGAAGGTGGCGCCTATCATCAACTCCTTCATCAATAGGTACCGG
CCTTTAGCAAGCTTTCTAGACCAT

BO15349.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-RA 993 CG7632-PA 1..990 17..1006 4935 99.9 Plus
CG7632-RB 939 CG7632-PB 44..936 114..1006 4465 100 Plus
CG7632-RB 939 CG7632-PB 1..45 17..61 225 100 Plus
CG11309-RF 1047 CG11309-PF 112..222 125..235 210 79.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:23:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-RA 1442 CG7632-RA 225..1214 17..1006 4935 99.9 Plus
CG7632-RB 1388 CG7632-RB 268..1160 114..1006 4465 100 Plus
CG7632-RB 1388 CG7632-RB 225..269 17..61 225 100 Plus
CG11309-RF 2125 CG11309-RF 370..480 125..235 210 79.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21305079..21305969 116..1006 4455 100 Plus
3L 28110227 3L 21304921..21305019 17..115 480 99 Plus
3L 28110227 3L 21303430..21303540 235..125 210 79.3 Minus
Blast to na_te.dros performed on 2014-11-27 16:23:39 has no hits.

BO15349.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:16 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 1..993 17..1009 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:13 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 202..1194 14..1006 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:13 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 225..1214 17..1008 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:16 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 202..1194 14..1006 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:33 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
CG7632-RA 225..1214 17..1008 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:33 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21305079..21305969 116..1008 99   Plus
3L 21304921..21305019 17..115 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:13 Download gff for BO15349.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21298021..21298119 17..115 98 -> Plus
arm_3L 21298179..21299069 116..1008 99   Plus

BO15349.pep Sequence

Translation from 16 to 1024

> BO15349.pep
MKVSRGLFLLKQLPNVRNSSSGPTKPFKILNKHFDEISIPVPWGHISGKW
YGPKHVRPIVGMHGWQDNAGTFDTLAPLLPSHLSFLSIDAPGHGLSSWLP
PGTSYHSIDLVLITRRLMEEYNWDKISILAHSMSSINGFVFSALFPDKVD
LFVGLDVLKPPVRSARGIVDSLTERIESALKLERRLKSGSEPPAYDWDQL
VTRLHEGSNKSVSIDACKYLLQRNCKPSTHEPHKYYFSRDNRLKSSLFYT
LHQEVPMEMARRIKCPHLFIKALQAPYYERKEYFDEVLAELQKNPLFEYH
EVEGTHHVHLNEPEKVAPIINSFINRYRPLASFLDH

BO15349.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG7632-PA 330 CG7632-PA 1..330 1..330 1766 100 Plus
CG7632-PB 312 CG7632-PB 1..312 1..330 1642 94.5 Plus
CG11309-PA 358 CG11309-PA 27..343 19..332 868 50.5 Plus
CG11309-PF 348 CG11309-PF 27..333 19..332 863 50.6 Plus
CG11309-PE 348 CG11309-PE 27..333 19..332 863 50.6 Plus