Clone Sequence Records
BO15350.5prime Sequence
416 bp (415 high quality bases) assembled on 2006-06-16
> BO15350.5prime
GAAGTTATCAGTCGACATGTTCTCGGACGACACCGATGAGTTGGACACCA
TCGCCGATGTGATGGGACTCCGGTCACAGGCGCGTCTCAATACGTTTCGC
GAAATGTGGTACCACGTCTTTCTGTGGGCCCTGTTCTCCTCCATATTCAT
TCACACCTGCGCCGCCGTGGTGGCCTTCTTCACGCTCCGGAAGCACAAGT
TCGGACGATTCTTCTCGATCCTCATCCTTGTCATGGGATTCCTTTCCCCG
GCCTCCAGTGGCATCATCAGCAGTGCAGTCATCGCCTTTGTGCATCGTGC
CTCCAGTCTGCCCATGTCGCCCATATACGCCATGATCTGGGGCCTCGGCC
AGACCATCGTCTCCGCCTGCCTGGGATTCACCCGGATTCTGGCCACGCTA
GCAAGCTTTCTAGACC
BO15350.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-PA | 387 | CG12341-RA | 1..384 | 17..400 | 1845 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:42:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-RA | 1100 | CG12341-RA | 507..891 | 16..400 | 1880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10812366..10812750 | 400..16 | 1880 | 99.2 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:42:25 has no hits.
BO15350.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:52 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-PA | 1..387 | 17..401 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:18 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-PA | 1..387 | 17..401 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:33:54 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 507..897 | 16..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:13:17 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 507..897 | 16..406 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:13:17 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10812360..10812750 | 16..406 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:33:54 Download gff for
BO15350.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6699865..6700255 | 16..406 | 98 | | Minus |
BO15350.3prime Sequence
416 bp (415 high quality bases) assembled on 2006-06-16
> BO15350.3prime
ATGGTCTAGAAAGCTTGCTAGCGTGGCCAGAATCCGGGTGAATCCCAGGC
AGGCGGAGACGATGGTCTGGCCGAGGCCCCAGATCATGGCGTATATGGGC
GACATGGGCAGACTGGAGGCACGATGCACAAAGGCGATGACTGCACTGCT
GATGATGCCACTGGAGGCCGGGGAAAGGAATCCCATGACAAGGATGAGGA
TCGAGAAGAATCGTCCGAACTTGTGCTTCCGGAGCGTGAAGAAGGCCACC
ACGGCGGCGCAGGTGTGAATGAATATGGAGGAGAACAGGGCCCACAGAAA
GACGTGGTACCACATTTCGCGAAACGTATTGAGACGCGCCTGTGACCGGA
GTCCCATCACATCGGCGATGGTGTCCAACTCATCGGTGTCGTCCGAGAAC
ATGTCGACTGATAACT
BO15350.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-PA | 387 | CG12341-RA | 1..384 | 402..19 | 1845 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:45:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-RA | 1100 | CG12341-RA | 507..891 | 403..19 | 1880 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:45:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10812366..10812750 | 19..403 | 1880 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:45:16 has no hits.
BO15350.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:52 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-PA | 1..387 | 18..402 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:16 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-PA | 1..387 | 18..402 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:42:58 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 507..897 | 13..403 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:50:41 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 507..897 | 13..403 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:50:41 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10812360..10812750 | 13..403 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:42:58 Download gff for
BO15350.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6699865..6700255 | 13..403 | 98 | | Plus |
BO15350.complete Sequence
418 bp (418 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633423
> BO15350.complete
GAAGTTATCAGTCGACATGTTCTCGGACGACACCGATGAGTTGGACACCA
TCGCCGATGTGATGGGACTCCGGTCACAGGCGCGTCTCAATACGTTTCGC
GAAATGTGGTACCACGTCTTTCTGTGGGCCCTGTTCTCCTCCATATTCAT
TCACACCTGCGCCGCCGTGGTGGCCTTCTTCACGCTCCGGAAGCACAAGT
TCGGACGATTCTTCTCGATCCTCATCCTTGTCATGGGATTCCTTTCCCCG
GCCTCCAGTGGCATCATCAGCAGTGCAGTCATCGCCTTTGTGCATCGTGC
CTCCAGTCTGCCCATGTCGCCCATATACGCCATGATCTGGGGCCTCGGCC
AGACCATCGTCTCCGCCTGCCTGGGATTCACCCGGATTCTGGCCACGCTA
GCAAGCTTTCTAGACCAT
BO15350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:42:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-RA | 387 | CG12341-PA | 1..384 | 17..400 | 1875 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-RA | 1100 | CG12341-RA | 507..891 | 16..400 | 1880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10812366..10812750 | 400..16 | 1880 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:42:03 has no hits.
BO15350.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:17 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 1..387 | 17..401 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:15 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 527..917 | 16..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:29 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 513..891 | 22..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:17 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 527..917 | 16..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:27 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12341-RA | 513..891 | 22..402 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:27 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10812364..10812744 | 22..402 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:29 Download gff for
BO15350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6699869..6700249 | 22..402 | 98 | | Minus |
BO15350.pep Sequence
Translation from 16 to 418
> BO15350.pep
MFSDDTDELDTIADVMGLRSQARLNTFREMWYHVFLWALFSSIFIHTCAA
VVAFFTLRKHKFGRFFSILILVMGFLSPASSGIISSAVIAFVHRASSLPM
SPIYAMIWGLGQTIVSACLGFTRILATLASFLDH
BO15350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12341-PA | 128 | CG12341-PA | 1..128 | 1..128 | 653 | 100 | Plus |