Clone Sequence Records
BO15354.3prime Sequence
533 bp (532 high quality bases) assembled on 2006-06-16
> BO15354.3prime
ATGGTCTAGAAAGCTTGCTTTACAATCCTCGTTCATGGGAAATCGCTGAG
TATTGTTAACCCACTCGTTCTGCAACTCTAAACGTTCTCCGTTCCATTGG
AAATGTGTGGGGGAAGCCTCGCCAGCGAGAAACTCAAAGTGCTGGCTGAG
CTCGATGGCCAGTTTGGAGCGGACTAGGCCTATTCCGCCCACCTGTGGCG
CAGCTGGATGATAGACCCTTCCGTTTCGCGGATCCATGTACAGTTTGTGG
GGTTCGTAAGGCAGGGTAAGGACCTGTCCCGCGTGTGCATAGCTGAGCAC
CTCCGTATCGTCCTTCCTCAGCTGTTCAGTAAACACAACAGGTGTGTCAT
CGCACCTAATAAAATTCCTTTCGCGGCCACAGAGGGAAATGTATGGAAAT
TCGCTTTCATATCTGCTCGTTTTGTTTAGCCGCAGTCGGTTGAAAAAGAA
CTTGAGGAAATCCTTCTCCTTAAAGCAGCTGGTGAAGTTTTTCATCTTTG
CATCGTCCAGGAAGAGCATGTCGACTGATAACT
BO15354.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-PA | 504 | CG30010-RA | 1..501 | 519..19 | 2505 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-RB | 873 | CG30010-RB | 311..811 | 519..19 | 2505 | 100 | Minus |
| CG30010-RA | 704 | CG30010-RA | 142..642 | 519..19 | 2505 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9864016..9864514 | 517..19 | 2495 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:07:27 has no hits.
BO15354.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:58 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-PA | 1..504 | 15..519 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:24 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-PA | 1..504 | 15..519 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:29:34 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 11..529 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:37:55 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 11..529 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:37:55 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9864014..9864519 | 11..520 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:29:34 Download gff for
BO15354.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5751519..5752024 | 11..520 | 99 | | Minus |
BO15354.5prime Sequence
533 bp (532 high quality bases) assembled on 2006-06-16
> BO15354.5prime
GAAGTTATCAGTCGACATGCTCTTCCTGGACGATGCAAAGATGAAAAACT
TCACCAGCTGCTTTAAGGAGAAGGATTTCCTCAAGTTCTTTTTCAACCGA
CTGCGGCTAAACAAAACGAGCAGATATGAAAGCGAATTTCCATACATTTC
CCTCTGTGGCCGCGAAAGGAATTTTATTAGGTGCGATGACACACCTGTTG
TGTTTACTGAACAGCTGAGGAAGGACGATACGGAGGTGCTCAGCTATGCA
CACGCGGGACAGGTCCTTACCCTGCCTTACGAACCCCACAAACTGTACAT
GGATCCGCGAAACGGAAGGGTCTATCATCCAGCTGCGCCACAGGTGGGCG
GAATAGGCCTAGTCCGCTCCAAACTGGCCATCGAGCTCAGCCAGCACTTT
GAGTTTCTCGCTGGCGAGGCTTCCCCCACACATTTCCAATGGAACGGAGA
ACGTTTAGAGTTGCAGAACGAGTGGGTTAACAATACTCAGCGATTTCCCA
TGAACGAGGATTGTAAAGCAAGCTTTCTAGACC
BO15354.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-PA | 504 | CG30010-RA | 1..501 | 17..517 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-RB | 873 | CG30010-RB | 311..811 | 17..517 | 2505 | 100 | Plus |
| CG30010-RA | 704 | CG30010-RA | 142..642 | 17..517 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9864016..9864514 | 19..517 | 2495 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:48:10 has no hits.
BO15354.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:45:59 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-PA | 1..504 | 17..521 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:26 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-PA | 1..504 | 17..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:50:41 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 7..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:40 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 7..525 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:40 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9864014..9864519 | 16..525 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:50:41 Download gff for
BO15354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5751519..5752024 | 16..525 | 99 | | Plus |
BO15354.complete Sequence
535 bp (535 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633426
> BO15354.complete
GAAGTTATCAGTCGACATGCTCTTCCTGGACGATGCAAAGATGAAAAACT
TCACCAGCTGCTTTAAGGAGAAGGATTTCCTCAAGTTCTTTTTCAACCGA
CTGCGGCTAAACAAAACGAGCAGATATGAAAGCGAATTTCCATACATTTC
CCTCTGTGGCCGCGAAAGGAATTTTATTAGGTGCGATGACACACCTGTTG
TGTTTACTGAACAGCTGAGGAAGGACGATACGGAGGTGCTCAGCTATGCA
CACGCGGGACAGGTCCTTACCCTGCCTTACGAACCCCACAAACTGTACAT
GGATCCGCGAAACGGAAGGGTCTATCATCCAGCTGCGCCACAGGTGGGCG
GAATAGGCCTAGTCCGCTCCAAACTGGCCATCGAGCTCAGCCAGCACTTT
GAGTTTCTCGCTGGCGAGGCTTCCCCCACACATTTCCAATGGAACGGAGA
ACGTTTAGAGTTGCAGAACGAGTGGGTTAACAATACTCAGCGATTTCCCA
TGAACGAGGATTGTAAAGCAAGCTTTCTAGACCAT
BO15354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-RB | 504 | CG30010-PB | 1..501 | 17..517 | 2505 | 100 | Plus |
| CG30010-RA | 504 | CG30010-PA | 1..501 | 17..517 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:45:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-RB | 873 | CG30010-RB | 311..811 | 17..517 | 2505 | 100 | Plus |
| CG30010-RA | 704 | CG30010-RA | 142..642 | 17..517 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9864016..9864514 | 19..517 | 2495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:45:02 has no hits.
BO15354.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:26 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 1..504 | 17..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:19 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 7..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:48 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 142..642 | 17..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:27 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 134..647 | 7..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:01 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30010-RA | 142..642 | 17..519 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:26:01 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9864015..9864514 | 17..519 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:48 Download gff for
BO15354.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5751520..5752019 | 17..519 | 99 | | Plus |
BO15354.pep Sequence
Translation from 16 to 535
> BO15354.pep
MLFLDDAKMKNFTSCFKEKDFLKFFFNRLRLNKTSRYESEFPYISLCGRE
RNFIRCDDTPVVFTEQLRKDDTEVLSYAHAGQVLTLPYEPHKLYMDPRNG
RVYHPAAPQVGGIGLVRSKLAIELSQHFEFLAGEASPTHFQWNGERLELQ
NEWVNNTQRFPMNEDCKASFLDH
BO15354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30010-PB | 167 | CG30010-PB | 1..167 | 1..167 | 904 | 100 | Plus |
| CG30010-PA | 167 | CG30010-PA | 1..167 | 1..167 | 904 | 100 | Plus |
