Clone BO15355 Report

Search the DGRC for BO15355

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:153
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG5569-RA
Protein status:BO15355.pep: validated full length
Sequenced Size:622

Clone Sequence Records

BO15355.3prime Sequence

620 bp (619 high quality bases) assembled on 2006-06-16

> BO15355.3prime
ATGGTCTAGAAAGCTTGCTTCGGTCTCGTAGAGCTCCTTCTTCCGCAGCT
TCGCTTGCAGAATGTCGTTCTCGTTGTAGGACAGGTGCAGCGGGGGTATC
AGGGCGCAGGCCACCATTCGGTTCTCGGCATTCAGGAAGTTGAAGGTGGC
ACATGCCTGCTCCGTGCGCAGGATCTCTACGTTTATCTTGTACTTCTTCA
TGAACTCGATGATCCTCTTGGAAAGAGCTGGGGGCGGTGCTTGGTCGCCA
ATGCCAATGATAAGCACGTCGATCTTTGGCTCCAGGGTGGGGAAGAGACT
GAGGCTGTCCTCGTTGATGTCCTCAAAGCTGTTGACGTTCCAGGACAGAA
CCGATCTGGGAAACACGGAGATGGGGCCAATGAGGACCATGTCGTTGTTG
AGCCGGAAGCCGTACTGGCTGTAGCCGGTGACCATAAGGCCCAGATCCGT
TTCGGTGTTGAAGATGGTGACTTTGGTCTTCCCGTCGTGGTCGTAGGCCT
TGCTGAAGTTGGCCGGAATAGCGTGAAGTGGGCGACAGGCGGTGATGCGC
GGTAGCAGAAGGTTGCGACCTTGCCGGCCCACCGTTCGCAGGGTGCGCGC
AATCATGTCGACTGATAACT

BO15355.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-PA 591 CG5569-RA 1..588 606..19 2940 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-RA 774 CG5569-RA 109..697 607..19 2945 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23865522..23865773 607..356 1260 100 Minus
2R 25286936 2R 23866184..23866386 358..156 1015 100 Minus
2R 25286936 2R 23866436..23866577 160..19 710 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:09:29 has no hits.

BO15355.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:00 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-PA 1..591 18..606 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:28 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-PA 1..591 18..606 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:50:47 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 105..704 11..613 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:42:50 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 105..704 11..613 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:42:50 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23865518..23865773 356..613 98 -> Minus
2R 23866187..23866385 157..355 100 -> Minus
2R 23866440..23866584 11..156 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:50:47 Download gff for BO15355.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19753041..19753296 356..613 98 -> Minus
arm_2R 19753710..19753908 157..355 100 -> Minus
arm_2R 19753963..19754107 11..156 97   Minus

BO15355.5prime Sequence

620 bp (619 high quality bases) assembled on 2006-06-16

> BO15355.5prime
GAAGTTATCAGTCGACATGATTGCGCGCACCCTGCGAACGGTGGGCCGGC
AAGGTCGCAACCTTCTGCTACCGCGCATCACCGCCTGTCGCCCACTTCAC
GCTATTCCGGCCAACTTCAGCAAGGCCTACGACCACGACGGGAAGACCAA
AGTCACCATCTTCAACACCGAAACGGATCTGGGCCTTATGGTCACCGGCT
ACAGCCAGTACGGCTTCCGGCTCAACAACGACATGGTCCTCATTGGCCCC
ATCTCCGTGTTTCCCAGATCGGTTCTGTCCTGGAACGTCAACAGCTTTGA
GGACATCAACGAGGACAGCCTCAGTCTCTTCCCCACCCTGGAGCCAAAGA
TCGACGTGCTTATCATTGGCATTGGCGACCAAGCACCGCCCCCAGCTCTT
TCCAAGAGGATCATCGAGTTCATGAAGAAGTACAAGATAAACGTAGAGAT
CCTGCGCACGGAGCAGGCATGTGCCACCTTCAACTTCCTGAATGCCGAGA
ACCGAATGGTGGCCTGCGCCCTGATACCCCCGCTGCACCTGTCCTACAAC
GAGAACGACATTCTGCAAGCGAAGCTGCGGAAGAAGGAGCTCTACGAGAC
CGAAGCAAGCTTTCTAGACC

BO15355.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-PA 591 CG5569-RA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:18:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-RA 774 CG5569-RA 109..697 16..604 2945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23865522..23865773 16..267 1260 100 Plus
2R 25286936 2R 23866184..23866386 265..467 1015 100 Plus
2R 25286936 2R 23866436..23866577 463..604 710 100 Plus
Blast to na_te.dros performed on 2015-02-11 13:18:07 has no hits.

BO15355.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:01 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-PA 1..591 17..605 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:28 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-PA 1..591 17..605 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:09:44 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 105..704 10..612 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:44:45 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 105..704 10..612 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:44:45 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23865518..23865773 10..267 98 -> Plus
2R 23866187..23866385 268..466 100 -> Plus
2R 23866440..23866584 467..612 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:09:44 Download gff for BO15355.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19753041..19753296 10..267 98 -> Plus
arm_2R 19753710..19753908 268..466 100 -> Plus
arm_2R 19753963..19754107 467..612 97   Plus

BO15355.complete Sequence

622 bp (622 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633427

> BO15355.complete
GAAGTTATCAGTCGACATGATTGCGCGCACCCTGCGAACGGTGGGCCGGC
AAGGTCGCAACCTTCTGCTACCGCGCATCACCGCCTGTCGCCCACTTCAC
GCTATTCCGGCCAACTTCAGCAAGGCCTACGACCACGACGGGAAGACCAA
AGTCACCATCTTCAACACCGAAACGGATCTGGGCCTTATGGTCACCGGCT
ACAGCCAGTACGGCTTCCGGCTCAACAACGACATGGTCCTCATTGGCCCC
ATCTCCGTGTTTCCCAGATCGGTTCTGTCCTGGAACGTCAACAGCTTTGA
GGACATCAACGAGGACAGCCTCAGTCTCTTCCCCACCCTGGAGCCAAAGA
TCGACGTGCTTATCATTGGCATTGGCGACCAAGCACCGCCCCCAGCTCTT
TCCAAGAGGATCATCGAGTTCATGAAGAAGTACAAGATAAACGTAGAGAT
CCTGCGCACGGAGCAGGCATGTGCCACCTTCAACTTCCTGAATGCCGAGA
ACCGAATGGTGGCCTGCGCCCTGATACCCCCGCTGCACCTGTCCTACAAC
GAGAACGACATTCTGCAAGCGAAGCTGCGGAAGAAGGAGCTCTACGAGAC
CGAAGCAAGCTTTCTAGACCAT

BO15355.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-RA 591 CG5569-PA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-RA 774 CG5569-RA 109..697 16..604 2945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23865522..23865773 16..267 1260 100 Plus
2R 25286936 2R 23866184..23866386 265..467 1015 100 Plus
2R 25286936 2R 23866436..23866577 463..604 710 100 Plus
Blast to na_te.dros performed on 2014-11-27 21:03:57 has no hits.

BO15355.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:29 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 1..591 17..605 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:21 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 98..697 10..612 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:58 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 110..697 17..606 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:30 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 98..697 10..612 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:58 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
CG5569-RA 110..697 17..606 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:58 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23865523..23865773 17..267 100 -> Plus
2R 23866187..23866385 268..466 100 -> Plus
2R 23866440..23866577 467..606 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:58 Download gff for BO15355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19753046..19753296 17..267 100 -> Plus
arm_2R 19753710..19753908 268..466 100 -> Plus
arm_2R 19753963..19754100 467..606 98   Plus

BO15355.pep Sequence

Translation from 16 to 622

> BO15355.pep
MIARTLRTVGRQGRNLLLPRITACRPLHAIPANFSKAYDHDGKTKVTIFN
TETDLGLMVTGYSQYGFRLNNDMVLIGPISVFPRSVLSWNVNSFEDINED
SLSLFPTLEPKIDVLIIGIGDQAPPPALSKRIIEFMKKYKINVEILRTEQ
ACATFNFLNAENRMVACALIPPLHLSYNENDILQAKLRKKELYETEASFL
DH

BO15355.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5569-PA 196 CG5569-PA 1..196 1..196 1011 100 Plus