Clone Sequence Records
BO15359.3prime Sequence
933 bp (766 high quality bases) assembled on 2006-06-16
> BO15359.3prime
ATGGTCTAGAAAGCTTGCGAAGATGAAGTCTTCGTCCTGGCCCTCCTCTT
CCAGCAACGAGAGGCTTCTCTCGAAGCGCTTGATGTCCTGGTACCAGCCG
GGGTCCCCGGACGATATATCCTCCGGCCTGCCGCCCTTGTGGCGGTACAG
GAACTCGGCGTGGCCCTGGCCGGGAACTCCGTTGACCGTGCAGGCCACAA
ACTGGTTGAACACCTTAGACTCCCAGTCGCCGCCGACGTAGCGCAGCGCG
GAGGCCTCCACCTGGATTTGCACGAGGTACTCCCGCTCCTCGGTGCGCAC
AATGAAATTCTGGTGCTGCGGCGGCGTTCCCTTTTCGCCGTACGAGTACA
GCTCGAAGTTGCTCCCGGTCAGCGGCTGATACTGCCGCTCGGGGCTGCAC
ACGTAGCCCACCTTCAGGGAGGACAGGAAGAAGGACGGCTGACTGAGGCT
GCCCACCACCATGCTGCTGCCATCGTCCATAAAGAGGGCAAAGTACACGT
ACCGGTTGATGGAGCTTAGGCAGCGCTCGGTGCCGAAGCTGTGGTCCCGG
AAGCCCACCATTTTCAGCGCCAGCTCCTTGCCATCGAGCGTGACCTGGCC
GGCCAGTTCTCCGTTCTGTTCGTAGTGGGTGCGCTTCTCTACGATGTGGT
TGACGCTGCGCAGCAGGCTGTAGAACTTTTCGTTCCAGGCCTCTCTGGCT
ATGGAGTCGGCTATCANGGCGCTGCTCAGATCTCTGTTGTAGTCGAAGTG
CTCAGCGGAGGAGCTTTCGAAACGGAGGTCCAAGTCCACGGCTACGTCCT
GCACGTCCGGCCCTTGAGTTTTCAGCAGTCCGGAGTACTTGAGCCGCCAC
ACACGCATAGATGCCTCCTGGTAGACGTGGAAGCCTCCACCCTGGACCGC
GTTGCTCTCCGCTCCATCCGCGGTGGTGAAGTA
BO15359.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 1335 | CG3706-RA | 418..1332 | 933..19 | 4531 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 531..1445 | 933..19 | 4549 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931031..931945 | 19..933 | 4549 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:42:22 has no hits.
BO15359.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:04 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 419..1335 | 18..932 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:32 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 419..1335 | 18..932 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:49:28 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 532..1445 | 19..932 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:03:29 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 532..1445 | 19..932 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:03:29 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931031..931944 | 19..932 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:49:28 Download gff for
BO15359.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825064..825977 | 19..932 | 99 | | Plus |
BO15359.5prime Sequence
902 bp (801 high quality bases) assembled on 2006-06-16
> BO15359.5prime
GAAGTTATCAGTCGACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTC
TAACGGCCTTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCA
CTAATCTTCGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTT
CTGGATCGCCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTC
GGAACGAGGAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGG
CCGCAGCAGCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCAT
GGCGGCCAACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGA
GGCGCGGAGTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGC
CTGTTCAGTTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGA
TGGAGCGGAGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGG
AGGCATCTATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACT
CAAGGGCCGGACGTGCAGGACGTAGCCGTGGACTTGGACCTCCGTTTCGA
AAGCTCCTCCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCC
TGATAGCCGACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGC
CTGCTGCGCAGCGTCAACCACATCGTAGAGAAGCGCACCCACTACGAACA
GAACGGAGAACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGC
TGAAAATGGTGGGCTTCCGGGACACAGCTTCGGCACCGAGCGCTGCCTAA
GCTCCATCAACCGGAACGTGTACTTTGCCCTCTTTATGGACGATGGCAGC
AG
BO15359.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 1335 | CG3706-RA | 1..807 | 17..823 | 4035 | 100 | Plus |
| CG3706-PA | 1335 | CG3706-RA | 808..887 | 823..902 | 375 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 112..1000 | 15..902 | 4405 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931476..932364 | 902..15 | 4380 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:48:20 has no hits.
BO15359.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:46:05 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 1..887 | 17..902 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:34 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-PA | 1..887 | 17..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:50:44 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..1000 | 9..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:42 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..1000 | 9..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:42 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931476..932368 | 9..902 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:50:44 Download gff for
BO15359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825509..826401 | 9..902 | 99 | | Minus |
BO15359.complete Sequence
1366 bp (1366 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633429
> BO15359.complete
GAAGTTATCAGTCGACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTC
TAACGGCCTTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCA
CTAATCTTCGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTT
CTGGATCGCCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTC
GGAACGAGGAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGG
CCGCAGCAGCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCAT
GGCGGCCAACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGA
GGCGCGGAGTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGC
CTGTTCAGTTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGA
TGGAGCGGAGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGG
AGGCATCTATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACT
CAAGGGCCGGACGTGCAGGACGTAGCCGTGGACTTGGACCTCCGTTTCGA
AAGCTCCTCCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCC
TGATAGCCGACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGC
CTGCTGCGCAGCGTCAACCACATCGTAGAGAAGCGCACCCACTACGAACA
GAACGGAGAACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGC
TGAAAATGGTGGGCTTCCGGGACCACAGCTTCGGCACCGAGCGCTGCCTA
AGCTCCATCAACCGGTACGTGTACTTTGCCCTCTTTATGGACGATGGCAG
CAGCATGGTGGTGGGCAGCCTCAGTCAGCCGTCCTTCTTCCTGTCCTCCC
TGAAGGTGGGCTACGTGTGCAGCCCCGAGCGGCAGTATCAGCCGCTGACC
GGGAGCAACTTCGAGCTGTACTCGTACGGCGAAAAGGGAACGCCGCCGCA
GCACCAGAATTTCATTGTGCGCACCGAGGAGCGGGAGTACCTCGTGCAAA
TCCAGGTGGAGGCCTCCGCGCTGCGCTACGTCGGCGGCGACTGGGAGTCT
AAGGTGTTCAACCAGTTTGTGGCCTGCACGGTCAACGGAGTTCCCGGCCA
GGGCCACGCCGAGTTCCTGTACCGCCACAAGGGCGGCAGGCCGGAGGATA
TATCGTCCGGGGACCCCGGCTGGTACCAGGACATCAAGCGCTTCGAGAGA
AGCCTCTCGTTGCTGGAAGAGGAGGGCCAGGACGAAGACTTCATCTTCGC
AAGCTTTCTAGACCAT
BO15359.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1335 | CG3706-PA | 1..1332 | 17..1348 | 6660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 112..1445 | 15..1348 | 6670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931031..932364 | 1348..15 | 6670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:39:46 has no hits.
BO15359.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:40 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 1..1335 | 17..1349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:33:26 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 304..1641 | 9..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:27 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 114..1445 | 17..1350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:40 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 304..1641 | 9..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:16 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 114..1445 | 17..1350 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:16 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931029..932362 | 17..1350 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:27 Download gff for
BO15359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825062..826395 | 17..1350 | 99 | | Minus |
BO15359.pep Sequence
Translation from 16 to 1366
> BO15359.pep
MIAALGLIFGILTALVVVALKLLGLKPPLIFGKYPLKGIFYRVKFWIALL
VLRRLRYRIYRRNEELLGSEEHLAKVDRPQQLSNDPKSYDVVSFMAANKE
GQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFTTADGAESN
AFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAE
HFDYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELA
GQVTLDGKELALKMVGFRDHSFGTERCLSSINRYVYFALFMDDGSSMVVG
SLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPPQHQNFI
VRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEF
LYRHKGGRPEDISSGDPGWYQDIKRFERSLSLLEEEGQDEDFIFASFLDH
BO15359.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-PA | 444 | CG3706-PA | 1..444 | 1..444 | 2306 | 100 | Plus |
